BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0100.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06690079.1| branched-chain amino acid ABC superfamily ATP... 261 8e-68 ref|YP_004416757.1| ABC transporter protein [Pusillimonas sp. T7... 256 2e-66 ref|ZP_06896930.1| ABC superfamily ATP binding cassette transpor... 242 3e-62 ref|YP_001416261.1| ABC transporter-like protein [Xanthobacter a... 220 9e-56 ref|YP_003694830.1| ABC transporter [Starkeya novella DSM 506] >... 219 2e-55 >ref|ZP_06690079.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF73036.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 218 Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 122/215 (56%), Positives = 161/215 (74%) Query: 1 MLKIQKVSVQIAGIRVLRDIATEFTAGSLLAVVGRNGAGKTTLLRAIMGLIPLQHGRIEF 60 ML + ++V +AG R+LRD+ F + + +VGRNGAGKTTLLR IMGL ++ G+I F Sbjct: 1 MLNLSAINVDLAGNRILRDVNASFESSKTIGIVGRNGAGKTTLLRTIMGLTKIKSGKIAF 60 Query: 61 DGVDLASVPGHQRSSLGIGYAPEDRVMFPTFSVEDNLRFPCDVLGLPKGQIDERLEQVLL 120 DG DL ++PGH+R++L +GYAPEDRV+FPT +V +NL PC+V G K I R++ VL Sbjct: 61 DGADLTAMPGHKRAALKVGYAPEDRVIFPTMTVAENLNLPCEVQGQSKSDIAARIQTVLK 120 Query: 121 AVPQLKVMLPRSGSALSGGQGKIAALGRALMAGRRLVLLDEPFQGLAPILAGEYAESLRK 180 VPQL+ ML RSGSALSGGQGK+ AL RA+M G RL++LDEPFQGLAP LA +Y E+L + Sbjct: 121 VVPQLEPMLGRSGSALSGGQGKMVALARAIMVGTRLLMLDEPFQGLAPKLARDYTEALGR 180 Query: 181 LRDINPKLCVVVTESNRSLLRDLPDATLTLERGEL 215 L+++ P LCVV+TESN LL D+PD T+ERG + Sbjct: 181 LKELQPDLCVVITESNVKLLGDIPDQIWTIERGSI 215 >ref|YP_004416757.1| ABC transporter protein [Pusillimonas sp. T7-7] gb|AEC20133.1| ABC transporter protein [Pusillimonas sp. T7-7] Length = 221 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 128/215 (59%), Positives = 161/215 (74%) Query: 1 MLKIQKVSVQIAGIRVLRDIATEFTAGSLLAVVGRNGAGKTTLLRAIMGLIPLQHGRIEF 60 MLK+ V+V +AG R+LRDI F AG+ + +VGRNGAGKTTLLR+IMGL+ L+ G I Sbjct: 1 MLKLTDVNVDLAGNRILRDINCNFVAGTTVGIVGRNGAGKTTLLRSIMGLVKLRSGEILL 60 Query: 61 DGVDLASVPGHQRSSLGIGYAPEDRVMFPTFSVEDNLRFPCDVLGLPKGQIDERLEQVLL 120 D V+L+++PGH R++ IGY+PEDRV+FPT SVE+NLR PC L K I++RLE V Sbjct: 61 DEVNLSALPGHARAAHQIGYSPEDRVIFPTMSVEENLRLPCATLKQSKQAIEQRLEVVTE 120 Query: 121 AVPQLKVMLPRSGSALSGGQGKIAALGRALMAGRRLVLLDEPFQGLAPILAGEYAESLRK 180 AVP LK ML RSGSALSGGQGK+ ALGRALM G RL+LLDEP+QGLAP L Y ++L + Sbjct: 121 AVPDLKPMLKRSGSALSGGQGKMVALGRALMVGTRLLLLDEPYQGLAPKLGLIYTQALGR 180 Query: 181 LRDINPKLCVVVTESNRSLLRDLPDATLTLERGEL 215 L+ + P LCVV+TESN LL D+PD +ERG + Sbjct: 181 LKTMQPDLCVVITESNIKLLGDIPDRIWAIERGSI 215 >ref|ZP_06896930.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gb|EFH11364.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 218 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 162/218 (74%) Query: 1 MLKIQKVSVQIAGIRVLRDIATEFTAGSLLAVVGRNGAGKTTLLRAIMGLIPLQHGRIEF 60 ML+++ VSV IAG VLR ++ AG +A++GRNGAGKTT LRA+MGL+PL+ GRI Sbjct: 1 MLRLEGVSVDIAGASVLRGVSLVVPAGGRVALIGRNGAGKTTTLRALMGLLPLRGGRIAV 60 Query: 61 DGVDLASVPGHQRSSLGIGYAPEDRVMFPTFSVEDNLRFPCDVLGLPKGQIDERLEQVLL 120 DG D A++P H R+ LG+GYAPE+R +F +F+V++NL P +VLGLP+ ++ RLE V Sbjct: 61 DGQDCAAIPAHHRTRLGLGYAPEERRLFGSFTVQENLLLPAEVLGLPRAELQRRLEAVYA 120 Query: 121 AVPQLKVMLPRSGSALSGGQGKIAALGRALMAGRRLVLLDEPFQGLAPILAGEYAESLRK 180 +P+L+ PR + LSGGQGK+ ALGRALM G R VLLDEPFQGLAP LA YAE+L + Sbjct: 121 LLPELRGFAPRKAAGLSGGQGKMVALGRALMVGSRAVLLDEPFQGLAPALALRYAEALAR 180 Query: 181 LRDINPKLCVVVTESNRSLLRDLPDATLTLERGELMAA 218 LR+ P+L +++TES+ LLR L D+T +ERGE+ AA Sbjct: 181 LREALPELAILITESSPDLLRPLVDSTYVIERGEIAAA 218 >ref|YP_001416261.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS66604.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 225 Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 115/215 (53%), Positives = 145/215 (67%), Gaps = 1/215 (0%) Query: 1 MLKIQKVSVQIAGIRVLRDIATEFTAGSLLAVVGRNGAGKTTLLRAIMGLIPLQHGRIEF 60 ML + V+V + VLR ++ + G +A VGRNGAGKTT LR+IMG GRIEF Sbjct: 1 MLILDHVTVSFGTVPVLRGVSFQLREGEAVAFVGRNGAGKTTTLRSIMGFT-RNGGRIEF 59 Query: 61 DGVDLASVPGHQRSSLGIGYAPEDRVMFPTFSVEDNLRFPCDVLGLPKGQIDERLEQVLL 120 DG DLA V H R LGIGYAPEDR +F F+VE+N+ P V L + RL++V Sbjct: 60 DGHDLAGVAAHLRPGLGIGYAPEDRRLFSRFTVEENILLPAQVAKLSSEETKRRLDRVYH 119 Query: 121 AVPQLKVMLPRSGSALSGGQGKIAALGRALMAGRRLVLLDEPFQGLAPILAGEYAESLRK 180 +P+LK M R ++SGGQGK+ ALGRALM RLVLLDEPFQGLAP+LA YAE+LR Sbjct: 120 VLPELKEMARRPAGSVSGGQGKMVALGRALMLATRLVLLDEPFQGLAPVLANRYAEALRS 179 Query: 181 LRDINPKLCVVVTESNRSLLRDLPDATLTLERGEL 215 LRD +P L +++TESN LLR + T+T+ERGE+ Sbjct: 180 LRDTDPSLALIITESNPHLLRGFAERTITIERGEI 214 >ref|YP_003694830.1| ABC transporter [Starkeya novella DSM 506] gb|ADH90211.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 226 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 110/215 (51%), Positives = 155/215 (72%) Query: 1 MLKIQKVSVQIAGIRVLRDIATEFTAGSLLAVVGRNGAGKTTLLRAIMGLIPLQHGRIEF 60 ML+++ V +I G+ V+RD + + AG+ +A++GRNGAGKT+LLR IMG + L+ G+I F Sbjct: 1 MLRLEGVWAEIDGVTVVRDASLDVPAGATVALIGRNGAGKTSLLRLIMGALKLRSGQIHF 60 Query: 61 DGVDLASVPGHQRSSLGIGYAPEDRVMFPTFSVEDNLRFPCDVLGLPKGQIDERLEQVLL 120 DG DLA +P H R S+GIGYAPE+R + +F++E+NLRFP +V+ L ++ RL+ V Sbjct: 61 DGHDLADLPLHHRPSIGIGYAPENRRLNGSFTLEENLRFPGEVIRLSPAELSRRLDLVYA 120 Query: 121 AVPQLKVMLPRSGSALSGGQGKIAALGRALMAGRRLVLLDEPFQGLAPILAGEYAESLRK 180 +P+L+ M R + LSGGQGK+ ALGRAL+AG RLVLLDEPFQGLAP+LA Y +LR Sbjct: 121 VLPELRDMRERPAAGLSGGQGKMVALGRALVAGTRLVLLDEPFQGLAPVLAQRYGAALRG 180 Query: 181 LRDINPKLCVVVTESNRSLLRDLPDATLTLERGEL 215 LR+ + + +++TESN LLR D +ERGE+ Sbjct: 181 LREFDRDIALLITESNPGLLRAFADEHYLIERGEI 215