BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0099.p (227 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_659924.2| short chain dehydrogenase [Rhizobium etli CFN 4... 229 3e-58 ref|YP_004716774.1| short chain dehydrogenase protein [Sinorhizo... 228 6e-58 ref|ZP_01441858.1| short chain dehydrogenase [Pelagibaca bermude... 201 1e-49 ref|NP_888293.1| short chain dehydrogenase [Bordetella bronchise... 187 1e-45 ref|NP_884542.1| short chain dehydrogenase [Bordetella parapertu... 186 2e-45 >ref|NP_659924.2| short chain dehydrogenase [Rhizobium etli CFN 42] ref|YP_001984395.1| probable oxidoreductase protein [Rhizobium etli CIAT 652] gb|AAM54937.2| probable oxidoreductase protein [Rhizobium etli CFN 42] gb|ACE93845.1| probable oxidoreductase protein [Rhizobium etli CIAT 652] gb|EGE60411.1| short chain dehydrogenase [Rhizobium etli CNPAF512] Length = 255 Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 114/194 (58%), Positives = 140/194 (72%) Query: 1 MRLANKVVILTGAAGGVGRATARLLAREGAQVVVADKNPDGVRELAKEIGAASLGVTVDV 60 M L +V I+TG G+GRATA L A+ GA VVVAD N D +A EIG+ + GV VDV Sbjct: 1 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV 60 Query: 61 SQHASVKAMVAQTLAHFGRVDVLINNAGFGRVGTVETIEEEEWDSIIGVNLKGTFLCSKN 120 S ++MV +T A +GRVDVL+NNAGFG G V TI EE WD I+ VN+KG FLCSK Sbjct: 61 SSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKY 120 Query: 121 VIPLMAAAGGGSIVNVGSYTAIAAIRERAAYIASKGGIAALTKAMALDHVGQKIRVNCVA 180 VIP+M GGGSI+N SYTA +AI +R AY+ASKG I++LT+AMA+DH + IRVN VA Sbjct: 121 VIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVA 180 Query: 181 PGTIATPYFEKMFA 194 PGTI +PYF K+FA Sbjct: 181 PGTIDSPYFTKIFA 194 >ref|YP_004716774.1| short chain dehydrogenase protein [Sinorhizobium fredii GR64] gb|AEI89637.1| short chain dehydrogenase protein [Sinorhizobium fredii GR64] Length = 255 Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 112/197 (56%), Positives = 142/197 (72%) Query: 1 MRLANKVVILTGAAGGVGRATARLLAREGAQVVVADKNPDGVRELAKEIGAASLGVTVDV 60 M L +KV ++TGA G+GRATA L AR+GA+V V D N D R++A+EIG ++ + DV Sbjct: 1 MDLESKVCVVTGAGSGIGRATAELFARQGAKVGVVDVNIDAARDVAREIGTDAIALKADV 60 Query: 61 SQHASVKAMVAQTLAHFGRVDVLINNAGFGRVGTVETIEEEEWDSIIGVNLKGTFLCSKN 120 S A V+A+V +GR+DVL+NNAGFG G V TI E +WD I+ VN+KG FLCSK Sbjct: 61 SSSAEVEALVRSVKEKWGRIDVLVNNAGFGMTGNVTTIAESDWDRIMAVNVKGIFLCSKY 120 Query: 121 VIPLMAAAGGGSIVNVGSYTAIAAIRERAAYIASKGGIAALTKAMALDHVGQKIRVNCVA 180 V+P+MA G GSI+N SYTA++AI R AY+ASKG I+ALT+AMALDH IRVN VA Sbjct: 121 VVPIMAEQGNGSIINTTSYTAVSAIANRTAYVASKGAISALTRAMALDHAKDGIRVNAVA 180 Query: 181 PGTIATPYFEKMFAXRA 197 PGTI +PYF K+FA A Sbjct: 181 PGTIDSPYFTKIFAEAA 197 >ref|ZP_01441858.1| short chain dehydrogenase [Pelagibaca bermudensis HTCC2601] gb|EAU48022.1| short chain dehydrogenase [Roseovarius sp. HTCC2601] Length = 253 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/197 (51%), Positives = 135/197 (68%), Gaps = 3/197 (1%) Query: 1 MRLANKVVILTGAAGGVGRATARLLAREGAQVVVADKNPDGVRELAKEI---GAASLGVT 57 MRL +K+ ++TGAA G+G TAR AREGA V+VAD+N D +A+E+ GAA+ V Sbjct: 1 MRLQDKIAVITGAASGIGHETARRFAREGAVVIVADRNEDAAETVAQELRDTGAAAEAVA 60 Query: 58 VDVSQHASVKAMVAQTLAHFGRVDVLINNAGFGRVGTVETIEEEEWDSIIGVNLKGTFLC 117 DVS A VKA++ + GR+D+L+NNAG+G GTV E+WD++ VN++G +L Sbjct: 61 FDVSVEAEVKALLDGVVERHGRLDILVNNAGYGIAGTVADTSVEDWDALFSVNVRGVYLG 120 Query: 118 SKNVIPLMAAAGGGSIVNVGSYTAIAAIRERAAYIASKGGIAALTKAMALDHVGQKIRVN 177 K+ +P+ A GGG IV+ S AI I RAAY ASKG ++ALT+AMA+DH IRVN Sbjct: 121 CKHAVPIFTAQGGGIIVSTASGGAIVGIANRAAYTASKGAVSALTRAMAIDHADANIRVN 180 Query: 178 CVAPGTIATPYFEKMFA 194 CVAPGTI TPYF ++FA Sbjct: 181 CVAPGTIETPYFTEIFA 197 >ref|NP_888293.1| short chain dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE32245.1| probable short chain dehydrogenase [Bordetella bronchiseptica RB50] Length = 255 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 97/196 (49%), Positives = 132/196 (67%), Gaps = 3/196 (1%) Query: 2 RLANKVVILTGAAGGVGRATARLLAREGAQVVVADKNPDGVRELAKEI---GAASLGVTV 58 RL+ ++ I+TGA G+G ATARL+AREGA VVVADK + +A+ I G + Sbjct: 4 RLSGRIAIVTGAGSGIGEATARLMAREGAVVVVADKAIEAAERVAQAIVAEGGRAQARQA 63 Query: 59 DVSQHASVKAMVAQTLAHFGRVDVLINNAGFGRVGTVETIEEEEWDSIIGVNLKGTFLCS 118 DV + SV+A+V A + R+DVL+NNAG+G TV +E +W +++ VN+ G FL Sbjct: 64 DVGEAQSVRALVDAVAARWERIDVLVNNAGYGIAATVVDTDEADWSALMRVNVDGVFLGC 123 Query: 119 KNVIPLMAAAGGGSIVNVGSYTAIAAIRERAAYIASKGGIAALTKAMALDHVGQKIRVNC 178 K VIP+M G G IVN S A+ +R+RAAY ASKG +AALT+AMALDH + IR+NC Sbjct: 124 KYVIPIMQRQGAGVIVNTASAGALVGLRQRAAYCASKGAVAALTRAMALDHATEGIRINC 183 Query: 179 VAPGTIATPYFEKMFA 194 VAPGTI +PYF +++A Sbjct: 184 VAPGTIESPYFREIYA 199 >ref|NP_884542.1| short chain dehydrogenase [Bordetella parapertussis 12822] emb|CAE37594.1| probable short chain dehydrogenase [Bordetella parapertussis] Length = 255 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/196 (49%), Positives = 132/196 (67%), Gaps = 3/196 (1%) Query: 2 RLANKVVILTGAAGGVGRATARLLAREGAQVVVADKNPDGVRELAKEI---GAASLGVTV 58 RL+ ++ I+TGA G+G ATARL+AREGA VVVADK + +A+ I G + Sbjct: 4 RLSGRIAIVTGAGSGIGEATARLMAREGAVVVVADKAIEAAERVAQAIVAEGGRAEARQA 63 Query: 59 DVSQHASVKAMVAQTLAHFGRVDVLINNAGFGRVGTVETIEEEEWDSIIGVNLKGTFLCS 118 DV + SV+A+V A + R+DVL+NNAG+G TV +E +W +++ VN+ G FL Sbjct: 64 DVGEAQSVRALVDAVAARWERIDVLVNNAGYGIAATVVDTDEADWSALMRVNVDGVFLGC 123 Query: 119 KNVIPLMAAAGGGSIVNVGSYTAIAAIRERAAYIASKGGIAALTKAMALDHVGQKIRVNC 178 K VIP+M G G IVN S A+ +R+RAAY ASKG +AALT+AMALDH + IR+NC Sbjct: 124 KYVIPIMQRQGAGVIVNTASAGALVGLRQRAAYCASKGAVAALTRAMALDHATEGIRINC 183 Query: 179 VAPGTIATPYFEKMFA 194 VAPGTI +PYF +++A Sbjct: 184 VAPGTIESPYFREIYA 199