BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0093.p         (164 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751019.1| hypothetical protein CFU_0358 [Collimonas fu...   295   2e-78
ref|YP_002872756.1| hypothetical protein PFLU3183 [Pseudomonas f...   229   7e-59
ref|YP_002872754.1| hypothetical protein PFLU3181 [Pseudomonas f...   228   2e-58
ref|YP_004154734.1| hypothetical protein Varpa_2423 [Variovorax ...   212   1e-53
ref|YP_004751017.1| hypothetical protein CFU_0356 [Collimonas fu...   200   5e-50

>ref|YP_004751019.1| hypothetical protein CFU_0358 [Collimonas fungivorans Ter331]
 gb|AEK60196.1| hypothetical protein CFU_0358 [Collimonas fungivorans Ter331]
          Length = 165

 Score =  295 bits (755), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 141/164 (85%), Positives = 149/164 (90%)

Query: 1   MKITFIKTLLFVAIIMGLSATTQAESLPRGQQVISSKTMSKPTYVQEYQAITEVLNKYIE 60
           MK+TFIKTL FVAII GL AT QAE + R QQ I SKT+SKPTYVQEYQAI EVLNKYIE
Sbjct: 1   MKMTFIKTLFFVAIITGLGATAQAEDISRDQQAIISKTISKPTYVQEYQAIVEVLNKYIE 60

Query: 61  GCKQAKSSIMKPAFNQHATMYSVGTDGKLAGGAIPILFDGIDRDFRPSPDAQAAIVRIEI 120
           GCKQAKSSIMKPAF+QHATMYSVG DGKL GGAIPILFD +D++FRPSPDAQAAIVRIEI
Sbjct: 61  GCKQAKSSIMKPAFSQHATMYSVGADGKLTGGAIPILFDAVDKNFRPSPDAQAAIVRIEI 120

Query: 121 VGTAASARIDANDMSGISFTDFFHLLKVEGKWTVVSKIFHAHPS 164
           VGTAASARIDANDMSGISFTDFFHLLKVEGKWTVVSKIF  HP+
Sbjct: 121 VGTAASARIDANDMSGISFTDFFHLLKVEGKWTVVSKIFQEHPN 164


>ref|YP_002872756.1| hypothetical protein PFLU3183 [Pseudomonas fluorescens SBW25]
 emb|CAY49410.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 127

 Score =  229 bits (585), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 109/124 (87%), Positives = 114/124 (91%)

Query: 39  MSKPTYVQEYQAITEVLNKYIEGCKQAKSSIMKPAFNQHATMYSVGTDGKLAGGAIPILF 98
           MSKPTYV EY AITEVLN+YIEGCKQAKSS+MKPAFN+ ATM+SV  DGKLAGGAIPILF
Sbjct: 1   MSKPTYVHEYHAITEVLNQYIEGCKQAKSSLMKPAFNEQATMFSVDGDGKLAGGAIPILF 60

Query: 99  DGIDRDFRPSPDAQAAIVRIEIVGTAASARIDANDMSGISFTDFFHLLKVEGKWTVVSKI 158
            GID  FRPSPDA AAIVRIEIVGTAASARIDANDMSGISFTDFFHLLKV+GKWTVVSKI
Sbjct: 61  KGIDEGFRPSPDAPAAIVRIEIVGTAASARIDANDMSGISFTDFFHLLKVDGKWTVVSKI 120

Query: 159 FHAH 162
           FH H
Sbjct: 121 FHTH 124


>ref|YP_002872754.1| hypothetical protein PFLU3181 [Pseudomonas fluorescens SBW25]
 emb|CAY49408.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 152

 Score =  228 bits (581), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 129/151 (85%)

Query: 14  IIMGLSATTQAESLPRGQQVISSKTMSKPTYVQEYQAITEVLNKYIEGCKQAKSSIMKPA 73
           +I  + A   A++ P   QV+SSKT+SK TY+++YQAIT+VLN YIEGCKQAKSSIMKPA
Sbjct: 1   MISSIGALAHADNSPSSPQVVSSKTVSKATYLEDYQAITKVLNTYIEGCKQAKSSIMKPA 60

Query: 74  FNQHATMYSVGTDGKLAGGAIPILFDGIDRDFRPSPDAQAAIVRIEIVGTAASARIDAND 133
           FN+HATMYSVG DGKL GGAIPILF+GID+ FRPSPDAQAAI RIEIVG AASARIDA  
Sbjct: 61  FNEHATMYSVGADGKLEGGAIPILFEGIDKGFRPSPDAQAAITRIEIVGNAASARIDATG 120

Query: 134 MSGISFTDFFHLLKVEGKWTVVSKIFHAHPS 164
           MSG+SFTDFFHLLKVEGKWTVVSK+F  H +
Sbjct: 121 MSGLSFTDFFHLLKVEGKWTVVSKVFQTHET 151


>ref|YP_004154734.1| hypothetical protein Varpa_2423 [Variovorax paradoxus EPS]
 gb|ADU36623.1| hypothetical protein Varpa_2423 [Variovorax paradoxus EPS]
          Length = 127

 Score =  212 bits (540), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 101/124 (81%), Positives = 108/124 (87%)

Query: 39  MSKPTYVQEYQAITEVLNKYIEGCKQAKSSIMKPAFNQHATMYSVGTDGKLAGGAIPILF 98
           MSKPTYV EYQ+I EVLNKY EGCKQAKSSIMKPAF+  ATM+SV  DGKLAGGAI  LF
Sbjct: 1   MSKPTYVPEYQSIVEVLNKYNEGCKQAKSSIMKPAFSDKATMFSVDGDGKLAGGAIQALF 60

Query: 99  DGIDRDFRPSPDAQAAIVRIEIVGTAASARIDANDMSGISFTDFFHLLKVEGKWTVVSKI 158
           DGID  FRPSP+AQ AIVR++IVGTAASARID ND+SG  FTDFFHLLKVEGKWTVVSKI
Sbjct: 61  DGIDSGFRPSPEAQGAIVRVDIVGTAASARIDTNDVSGFCFTDFFHLLKVEGKWTVVSKI 120

Query: 159 FHAH 162
           FH H
Sbjct: 121 FHTH 124


>ref|YP_004751017.1| hypothetical protein CFU_0356 [Collimonas fungivorans Ter331]
 gb|AEK60194.1| hypothetical protein CFU_0356 [Collimonas fungivorans Ter331]
          Length = 127

 Score =  200 bits (509), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 106/124 (85%)

Query: 39  MSKPTYVQEYQAITEVLNKYIEGCKQAKSSIMKPAFNQHATMYSVGTDGKLAGGAIPILF 98
           M+KPTYV +YQAI EVLNKY EGCKQAKSSIMK AF++ ATM+SV  DGKL GG I  LF
Sbjct: 1   MNKPTYVPDYQAIVEVLNKYNEGCKQAKSSIMKTAFSEQATMFSVNGDGKLTGGPIQALF 60

Query: 99  DGIDRDFRPSPDAQAAIVRIEIVGTAASARIDANDMSGISFTDFFHLLKVEGKWTVVSKI 158
           DGID  FRPSP+AQ AIV+++IVGTAASARID ND+SG  FTDFF+LLKV+GKWTVVSKI
Sbjct: 61  DGIDSAFRPSPEAQGAIVKVDIVGTAASARIDTNDVSGFCFTDFFNLLKVDGKWTVVSKI 120

Query: 159 FHAH 162
           FH H
Sbjct: 121 FHTH 124