BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0084.p (235 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004307849.1| phosphonate-transporting ATPase [Clostridium... 261 5e-68 ref|ZP_00144709.1| Branched-chain amino acid transport ATP-bindi... 259 2e-67 ref|ZP_08690205.1| branched chain amino acid ABC transporter ATP... 259 3e-67 ref|ZP_04971755.1| branched chain amino acid ABC superfamily ATP... 258 4e-67 ref|ZP_06025879.1| high affinity branched-chain amino acid ABC t... 258 4e-67 >ref|YP_004307849.1| phosphonate-transporting ATPase [Clostridium lentocellum DSM 5427] gb|ADZ82651.1| Phosphonate-transporting ATPase [Clostridium lentocellum DSM 5427] Length = 236 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 122/233 (52%), Positives = 176/233 (75%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V+NL V+Y +QA+ G++ VNEGE+++++G+NGAGKTT +++++GL++ +GSI+F Sbjct: 3 MLKVENLEVYYGMIQAIKGISFEVNEGEVIALIGANGAGKTTILHTVTGLVEARAGSIEF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGSTHPAARKVRKESMEEVYTL 121 E K++L A V +G+ VPEGRR+F +TV ENL LG+ +K +E++ +YT Sbjct: 63 EGKNLLKTPAHHIVSMGMAHVPEGRRIFQELTVLENLKLGAYTRNDKKEMEETLRMIYTK 122 Query: 122 LPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKSL 181 PRL ER+ QIA TLSGGEQQM+A+GRAL S PK+++ DEPS+GLSPL V E+F +I+ + Sbjct: 123 FPRLEERKEQIAGTLSGGEQQMLAMGRALMSHPKIILMDEPSMGLSPLYVSEIFKIIEEI 182 Query: 182 NERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 + G T+L+VEQN +K L I DR+YVLE G IV+EG KDL++DD IKKA+LG Sbjct: 183 SSSGTTVLLVEQNAKKALSIADRAYVLETGKIVLEGNAKDLINDDSIKKAYLG 235 >ref|ZP_00144709.1| Branched-chain amino acid transport ATP-binding protein livF [Fusobacterium nucleatum subsp. vincentii ATCC 49256] ref|ZP_04573006.1| branched-chain amino acid transport ATP-binding protein livF [Fusobacterium sp. 4_1_13] ref|ZP_05551320.1| urea ABC transporter, ATP-binding protein UrtE [Fusobacterium sp. 3_1_36A2] ref|ZP_06750244.1| high affinity branched-chain amino acid ABC transporter, ATP-binding protein [Fusobacterium sp. 3_1_27] gb|EAA23694.1| Branched-chain amino acid transport ATP-binding protein livF [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gb|EEO40385.1| branched-chain amino acid transport ATP-binding protein livF [Fusobacterium sp. 4_1_13] gb|EEU32976.1| urea ABC transporter, ATP-binding protein UrtE [Fusobacterium sp. 3_1_36A2] gb|EFG34032.1| high affinity branched-chain amino acid ABC transporter, ATP-binding protein [Fusobacterium sp. 3_1_27] Length = 237 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 128/234 (54%), Positives = 173/234 (73%), Gaps = 1/234 (0%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V++L V YD +QAL G++L +NEGE+VSI+G+NGAGKTT + ++SGL+ SGSI F Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSITF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGS-THPAARKVRKESMEEVYT 120 E K++L A LGI QVPEGRR+F + V++NL LG T + + ++E Y Sbjct: 63 EGKNLLKEKAHNICKLGIAQVPEGRRIFSQLAVKDNLKLGQFTIKDSAEKKEEDRANFYK 122 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 + PR+ ER+ Q+A TLSGGEQQM+A+GRAL S+PKLL+ DEPS+GLSPL V+E+F +IK Sbjct: 123 VFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIKQ 182 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G TIL+VEQN + L I DR+YV+E G IV+EG KDLL +D +KKA+LG Sbjct: 183 LKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAKDLLYNDRVKKAYLG 236 >ref|ZP_08690205.1| branched chain amino acid ABC transporter ATP-binding protein [Fusobacterium sp. 2_1_31] gb|EEO38054.1| branched chain amino acid ABC transporter ATP-binding protein [Fusobacterium sp. 2_1_31] Length = 237 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 128/234 (54%), Positives = 172/234 (73%), Gaps = 1/234 (0%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V++L V YD +QAL G++L +NEGE+VSI+G+NGAGKTT + ++SGL+ SGSI F Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGS-THPAARKVRKESMEEVYT 120 E K +L A LGI QVPEGRR+F + V++NL LG T + + ++E Y Sbjct: 63 EGKDLLKEKAHNICKLGIAQVPEGRRIFSQLAVKDNLKLGQFTIKDSAEKKEEDRANFYK 122 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 + PR+ ER+ Q+A TLSGGEQQM+A+GRAL S+PKLL+ DEPS+GLSPL V+E+F +IK Sbjct: 123 VFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIKQ 182 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G TIL+VEQN + L I DR+YV+E G IV+EG KDLL +D +KKA+LG Sbjct: 183 LKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGNAKDLLHNDRVKKAYLG 236 >ref|ZP_04971755.1| branched chain amino acid ABC superfamily ATP binding cassette transporter ABC protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gb|EDK89839.1| branched chain amino acid ABC superfamily ATP binding cassette transporter ABC protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 237 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 128/234 (54%), Positives = 173/234 (73%), Gaps = 1/234 (0%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V++L V YD +QAL G++L +NEGE+VSI+G+NGAGKTT + ++SGL+ SGSI F Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGS-THPAARKVRKESMEEVYT 120 E K++L A LGI QVPEGRR+F + V++NL LG T + + ++E Y Sbjct: 63 EGKNLLKEKAHNICKLGIAQVPEGRRIFSQLAVKDNLKLGQFTIKDSAEKKEEDRANFYK 122 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 + PR+ ER+ Q+A TLSGGEQQM+A+GRAL S+PKLL+ DEPS+GLSPL V+E+F +IK Sbjct: 123 VFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIKQ 182 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G TIL+VEQN + L I DR+YV+E G IV+EG KDLL +D +KKA+LG Sbjct: 183 LKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAKDLLYNDRVKKAYLG 236 >ref|ZP_06025879.1| high affinity branched-chain amino acid ABC transporter, ATP-binding protein [Fusobacterium periodonticum ATCC 33693] gb|EFE87555.1| high affinity branched-chain amino acid ABC transporter, ATP-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 237 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 127/234 (54%), Positives = 173/234 (73%), Gaps = 1/234 (0%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V++L V YD +QAL G++L +NEGE+VSI+G+NGAGKTT + ++SGL+ SGSI F Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGS-THPAARKVRKESMEEVYT 120 E K +L A LGI QVPEGRR+F + V++NL LG T + + +++ + Y Sbjct: 63 EGKDLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTIKDSAEKKEQDRADFYK 122 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 + PR+ ER+ Q+A TLSGGEQQM+A+GRAL S+PKLL+ DEPS+GLSPL V+E+F +IK Sbjct: 123 VFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIKQ 182 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G TIL+VEQN + L I DR+YV+E G IV+EG KDLL +D +KKA+LG Sbjct: 183 LKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGNAKDLLHNDRVKKAYLG 236