BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0082.p         (133 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001890118.1| NIPSNAP family containing protein [Burkholde...   149   2e-34
ref|YP_001561073.1| NIPSNAP family protein [Delftia acidovorans ...   125   2e-27
ref|YP_004156105.1| nipsnap family containing protein [Variovora...   124   5e-27
ref|YP_004485440.1| NIPSNAP family containing protein [Delftia s...   122   2e-26
ref|ZP_06895620.1| nipsnap domain protein [Roseomonas cervicalis...   118   4e-25

>ref|YP_001890118.1| NIPSNAP family containing protein [Burkholderia phytofirmans PsJN]
 gb|ACD20747.1| NIPSNAP family containing protein [Burkholderia phytofirmans PsJN]
          Length = 113

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 84/109 (77%)

Query: 1   MFVEERIYTLVPGKAPDFLKLYETEGMAIQARHLPAMVGYYSSDIGALNLIVHQWAFEDI 60
           MFVEERIYTL PG+  DFLKLYE E +AIQ +HL  M+GYYSS+ G LN I+H WAF+DI
Sbjct: 1   MFVEERIYTLRPGRTGDFLKLYEEEALAIQLKHLRTMIGYYSSEFGPLNQIIHLWAFDDI 60

Query: 61  NQRVAMRAGMVADPDWQAYLKKLMPLILQQESRMLVPAPFFAERLQTMV 109
           N+RV  R  M+ADPDW+ ++ KL+PLI  QESR+L PAPFF  +L  +V
Sbjct: 61  NRRVERRDRMMADPDWRHFVNKLLPLIEHQESRILRPAPFFRSKLAAIV 109


>ref|YP_001561073.1| NIPSNAP family protein [Delftia acidovorans SPH-1]
 gb|ABX32688.1| NIPSNAP family containing protein [Delftia acidovorans SPH-1]
          Length = 128

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 75/101 (74%)

Query: 1   MFVEERIYTLVPGKAPDFLKLYETEGMAIQARHLPAMVGYYSSDIGALNLIVHQWAFEDI 60
           M VE+R YT  PGK  D++ LY+TEG+ +Q R L  MVGYY+SD G LN IVH WA+ D+
Sbjct: 1   MLVEQRTYTAHPGKWRDYMALYQTEGLELQQRILGRMVGYYTSDSGPLNQIVHLWAYTDL 60

Query: 61  NQRVAMRAGMVADPDWQAYLKKLMPLILQQESRMLVPAPFF 101
           N+R   RA ++A+P WQAY+ +++PL+  QES+ LVPAPFF
Sbjct: 61  NERAERRARLLAEPRWQAYVARMLPLLQSQESKFLVPAPFF 101


>ref|YP_004156105.1| nipsnap family containing protein [Variovorax paradoxus EPS]
 gb|ADU37994.1| NIPSNAP family containing protein [Variovorax paradoxus EPS]
          Length = 107

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 75/106 (70%)

Query: 1   MFVEERIYTLVPGKAPDFLKLYETEGMAIQARHLPAMVGYYSSDIGALNLIVHQWAFEDI 60
           M VE+R YT  PGK  D+L LYE EG+ IQ R L  MVGYY S+ G L+ IVH WA+ED+
Sbjct: 1   MIVEQRTYTTHPGKWRDYLALYEAEGLEIQKRILGRMVGYYRSETGTLSQIVHMWAYEDM 60

Query: 61  NQRVAMRAGMVADPDWQAYLKKLMPLILQQESRMLVPAPFFAERLQ 106
           N+R   R  ++ADP ++AY  K++PL+  QESR+LVPA FFA R Q
Sbjct: 61  NERTHRRHALMADPGFKAYAAKMLPLLQNQESRILVPADFFAPRWQ 106


>ref|YP_004485440.1| NIPSNAP family containing protein [Delftia sp. Cs1-4]
 gb|AEF87085.1| NIPSNAP family containing protein [Delftia sp. Cs1-4]
          Length = 128

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 73/101 (72%)

Query: 1   MFVEERIYTLVPGKAPDFLKLYETEGMAIQARHLPAMVGYYSSDIGALNLIVHQWAFEDI 60
           M VE+R YT  PGK  D+L LY+ EG+ +Q R L  MVGYY+SD G LN IVH WA+ D+
Sbjct: 1   MLVEQRTYTAHPGKWRDYLALYQAEGLELQQRILGRMVGYYTSDSGPLNQIVHLWAYTDL 60

Query: 61  NQRVAMRAGMVADPDWQAYLKKLMPLILQQESRMLVPAPFF 101
           N+R   RA ++ +P WQAY+ +++PL+  QES+ L+PAPFF
Sbjct: 61  NERAERRARLLGEPRWQAYVARMLPLLQSQESKFLIPAPFF 101


>ref|ZP_06895620.1| nipsnap domain protein [Roseomonas cervicalis ATCC 49957]
 gb|EFH12688.1| nipsnap domain protein [Roseomonas cervicalis ATCC 49957]
          Length = 107

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 73/100 (73%)

Query: 1   MFVEERIYTLVPGKAPDFLKLYETEGMAIQARHLPAMVGYYSSDIGALNLIVHQWAFEDI 60
           M VEERIYTL PG+A  +L  YE EG+AIQ   L  MVGYYS++ G LN ++H WA+ED+
Sbjct: 1   MIVEERIYTLQPGQAGAYLAAYEAEGLAIQKPILGRMVGYYSTEFGPLNQVIHLWAYEDL 60

Query: 61  NQRVAMRAGMVADPDWQAYLKKLMPLILQQESRMLVPAPF 100
            +R   RA ++ADP W+ Y  K+ P++L QE+++L+PAPF
Sbjct: 61  AERTERRARLLADPAWRTYATKVRPMVLTQENKLLLPAPF 100