BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0073.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05095307.1| putative NAD-binding domain 4 protein [marine... 246 2e-63 ref|YP_002546772.1| short-chain alcohol dehydrogenase [Agrobacte... 235 4e-60 ref|YP_917344.1| short-chain dehydrogenase/reductase SDR [Paraco... 234 9e-60 ref|YP_266275.1| short chain dehydrogenase [Candidatus Pelagibac... 223 2e-56 ref|ZP_01000266.1| short chain dehydrogenase [Oceanicola batsens... 222 3e-56 >ref|ZP_05095307.1| putative NAD-binding domain 4 protein [marine gamma proteobacterium HTCC2148] gb|EEB78420.1| putative NAD-binding domain 4 protein [marine gamma proteobacterium HTCC2148] Length = 250 Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/258 (51%), Positives = 170/258 (65%), Gaps = 9/258 (3%) Query: 1 MNPSLMMPSFRVDGKTALVTGAGSGIGAAISSTLAGSGARVHMLSLNGEQLAATAAALRE 60 MN FR+D K ALVTGAG GIG A + LA SGA V ++ L A+A Sbjct: 1 MNDDTPSSPFRLDKKRALVTGAGKGIGRACAQRLAKSGANVIAVARTEADLETLASAH-- 58 Query: 61 LGGDVHAHACDVTDSDAVRRLIDGLPGLDIVVNNAGTNIPEPFLEVSDAHLDFMCNLNVR 120 G + DVTD ++R I+ L LDI+VNN GTN P+PF EV LD + NLNVR Sbjct: 59 -PGLIEPWVADVTDEKFLQR-IESLERLDILVNNVGTNKPQPFTEVERETLDLILNLNVR 116 Query: 121 ACFVVSQAAVRKMLADPARVAKGGCVINVSSQMGHVGSPDRTVYCMNKHAIEGLTKAMAV 180 + F+V+QAA R M+ + G +IN+ SQMGHVG+ +RTVYCM KHAIEGLTKAMAV Sbjct: 117 SAFLVAQAAARVMVKQGS-----GSIINMGSQMGHVGAKNRTVYCMTKHAIEGLTKAMAV 171 Query: 181 ELAATGVRVNSIGPTFVDTPLIRRIVDTPEKHEFLVSKIPMGRMATMEDIAAAALYLASP 240 ELA +RVNS+ PTF++TPL + + + E H+ ++S+IPMG + ++D+A A L+LASP Sbjct: 172 ELAVLDIRVNSVAPTFIETPLTKPMFEKAEFHQDVISRIPMGHIGQVDDVANAVLFLASP 231 Query: 241 AAAMVTGHCLLVDGGWTA 258 AA MVTG L VDGGWTA Sbjct: 232 AANMVTGDSLKVDGGWTA 249 >ref|YP_002546772.1| short-chain alcohol dehydrogenase [Agrobacterium radiobacter K84] gb|ACM31308.1| short-chain alcohol dehydrogenase [Agrobacterium radiobacter K84] Length = 258 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 127/252 (50%), Positives = 173/252 (68%), Gaps = 4/252 (1%) Query: 8 PSFRVDGKTALVTGAGSGIGAAISSTLAGSGARVHMLSLNGEQLAATAAALRELGGDVHA 67 P FR+D + ALVTGAG G+G A + LA +GA V +++ ++ AALRE G A Sbjct: 11 PGFRLDTRHALVTGAGRGLGLAAAVALAEAGAMVTLVARTTGEIEDATAALRERGLRARA 70 Query: 68 HACDVTDSDAVRRLIDGLPGLDIVVNNAGTNIPEPFLEVSDAHLDFMCNLNVRACFVVSQ 127 A DVTD+ AV L+ G DI+VNNAGTN P PF++VS+ D + LNVR+ F SQ Sbjct: 71 RAVDVTDTQAVEALLAGEVPFDILVNNAGTNKPGPFVDVSEEKYDLVMGLNVRSAFFTSQ 130 Query: 128 AAVRKMLADPARVAKGGCVINVSSQMGHVGSPDRTVYCMNKHAIEGLTKAMAVELAATGV 187 A R+++A+ + G +IN++SQMGHVG+ RT+YC +KHA+EGLTKA+A+ELA G+ Sbjct: 131 AFARRLIAE----QRPGVIINMTSQMGHVGAARRTIYCASKHALEGLTKALAIELAEHGI 186 Query: 188 RVNSIGPTFVDTPLIRRIVDTPEKHEFLVSKIPMGRMATMEDIAAAALYLASPAAAMVTG 247 RVNS+ PTF++TP+ + + E +SKI +GR+ T+EDI A +YLAS AAA+VTG Sbjct: 187 RVNSVAPTFIETPMTKPFFEDEEFRRQTLSKIKLGRIGTVEDIMGAIVYLASDAAALVTG 246 Query: 248 HCLLVDGGWTAQ 259 LLVDGGWTA+ Sbjct: 247 TSLLVDGGWTAE 258 >ref|YP_917344.1| short-chain dehydrogenase/reductase SDR [Paracoccus denitrificans PD1222] gb|ABL71648.1| short-chain dehydrogenase/reductase SDR [Paracoccus denitrificans PD1222] Length = 252 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 121/253 (47%), Positives = 163/253 (64%), Gaps = 4/253 (1%) Query: 7 MPSFRVDGKTALVTGAGSGIGAAISSTLAGSGARVHMLSLNGEQLAATAAALRELGGDVH 66 +P F + G+ ALVTGAG GIG AI+ A +GA V + + + ++A A AL E G Sbjct: 4 LPDFSLKGRVALVTGAGRGIGRAIAEVYAQAGAEVVLCARSRTEIAEVAQALVEQGFKAR 63 Query: 67 AHACDVTDSDAVRRLIDGLPGLDIVVNNAGTNIPEPFLEVSDAHLDFMCNLNVRACFVVS 126 A CDVTD R L DGL LDI VNNAGTN P P ++V++ D + LN+RA F Sbjct: 64 AIPCDVTDVADFRALADGLERLDIFVNNAGTNRPRPLVDVTEEDFDVIAGLNLRAAFFAL 123 Query: 127 QAAVRKMLADPARVAKGGCVINVSSQMGHVGSPDRTVYCMNKHAIEGLTKAMAVELAATG 186 Q+ R+M + +GG +IN+SSQMGH+G+ DR+VYC K IEGLTKA A+EL+ Sbjct: 124 QSVARRM----RDLGRGGSIINMSSQMGHIGAADRSVYCATKWGIEGLTKASAIELSPFR 179 Query: 187 VRVNSIGPTFVDTPLIRRIVDTPEKHEFLVSKIPMGRMATMEDIAAAALYLASPAAAMVT 246 +RVN+I PTF++TPL R D P E + I +GR+ + DI AALYLAS A+A++T Sbjct: 180 IRVNTICPTFIETPLTRPYFDDPAFREHCLRMIKLGRVGQVGDIVGAALYLASDASALMT 239 Query: 247 GHCLLVDGGWTAQ 259 G +++DGGWTA+ Sbjct: 240 GSAVILDGGWTAE 252 >ref|YP_266275.1| short chain dehydrogenase [Candidatus Pelagibacter ubique HTCC1062] ref|ZP_01263988.1| short chain dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] gb|AAZ21672.1| short chain dehydrogenase [Candidatus Pelagibacter ubique HTCC1062] gb|EAS84475.1| short chain dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] Length = 252 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/255 (43%), Positives = 162/255 (63%), Gaps = 3/255 (1%) Query: 5 LMMPSFRVDGKTALVTGAGSGIGAAISSTLAGSGARVHMLSLNGEQLAATAAALRELGGD 64 + + + K ALVTGAG G+G A S LA +GA + LS L ++++ G Sbjct: 1 MYLQKINLKNKYALVTGAGKGLGRACSIALAEAGATIIALSRTQSDLDKLEKEIKKIKGK 60 Query: 65 VHAHACDVTDSDAVRRLIDGLPGLDIVVNNAGTNIPEPFLEVSDAHLDFMCNLNVRACFV 124 V CDV + + ++ +D + +DI+VNNAGTNIPEPF ++ +++++ +LN++A F Sbjct: 61 VIKVNCDVMNYEDLKEKLDKIKIIDILVNNAGTNIPEPFEKIKQENMNYLVDLNLKAAFN 120 Query: 125 VSQAAVRKMLADPARVAKGGCVINVSSQMGHVGSPDRTVYCMNKHAIEGLTKAMAVELAA 184 V+Q V+KML + R GG +IN+SSQ+GHVG R VY M K IEGLTK M VELA Sbjct: 121 VAQLVVKKMLKNKKR---GGSIINMSSQLGHVGMSGRNVYNMTKFGIEGLTKGMGVELAK 177 Query: 185 TGVRVNSIGPTFVDTPLIRRIVDTPEKHEFLVSKIPMGRMATMEDIAAAALYLASPAAAM 244 +RVN++ PTFV TP+++R E + + IPMG++AT D+A + +LAS A++M Sbjct: 178 NNIRVNTVAPTFVATPMVKRFFKNKEFKKLALGNIPMGKLATESDVATSVCFLASSASSM 237 Query: 245 VTGHCLLVDGGWTAQ 259 +T +LVDGGWTA+ Sbjct: 238 ITATSILVDGGWTAK 252 >ref|ZP_01000266.1| short chain dehydrogenase [Oceanicola batsensis HTCC2597] gb|EAQ02197.1| short chain dehydrogenase [Oceanicola batsensis HTCC2597] Length = 252 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 116/252 (46%), Positives = 166/252 (65%), Gaps = 4/252 (1%) Query: 7 MPSFRVDGKTALVTGAGSGIGAAISSTLAGSGARVHMLSLNGEQLAATAAALRELGGDVH 66 +P+FR+DG+ ALVTGAG GIG AI+ A +GA V + + + E+L A + +R GG Sbjct: 4 LPTFRLDGRRALVTGAGRGIGRAIALGYAAAGAEVTLCARSQEELNALSEEIRASGGTCD 63 Query: 67 AHACDVTDSDAVRRLIDGLPGLDIVVNNAGTNIPEPFLEVSDAHLDFMCNLNVRACFVVS 126 D+TD AV + I++NNAGTN P+P EV D +D + +LNVRA +++ Sbjct: 64 VMPLDITDQAAVTAALADREAYHILLNNAGTNRPKPLTEVVDEDIDAVLDLNVRATILMT 123 Query: 127 QAAVRKMLADPARVAKGGCVINVSSQMGHVGSPDRTVYCMNKHAIEGLTKAMAVELAATG 186 +A V +ML D A G VI +SSQMGHVG+ +RT+YC +K A+EG T+A+AVEL G Sbjct: 124 RAVVSRMLED----AVTGSVITMSSQMGHVGAANRTLYCASKWAVEGFTRALAVELGPQG 179 Query: 187 VRVNSIGPTFVDTPLIRRIVDTPEKHEFLVSKIPMGRMATMEDIAAAALYLASPAAAMVT 246 +RVN+I PTF++TPL + P E ++SKI +GR+ DI AA++LAS A+A++T Sbjct: 180 IRVNTICPTFIETPLTAPFFEDPAFKEQVLSKIKLGRIGQPSDIVGAAVFLASDASALMT 239 Query: 247 GHCLLVDGGWTA 258 G +++DGGWTA Sbjct: 240 GSSVMLDGGWTA 251