BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0038.p (523 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_999447.1| extracellular solute-binding protein [Vermineph... 869 0.0 ref|YP_003776573.1| dipeptide ABC transporter periplasmic protei... 862 0.0 ref|YP_003749701.1| extracellular solute-binding protein, family... 786 0.0 ref|ZP_02367420.1| extracellular solute-binding protein, family ... 786 0.0 ref|ZP_02468218.1| extracellular solute-binding protein, family ... 784 0.0 >ref|YP_999447.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM60429.1| extracellular solute-binding protein, family 5 [Verminephrobacter eiseniae EF01-2] Length = 521 Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/490 (82%), Positives = 448/490 (91%) Query: 34 ISTPALANKANDTLVYASDSEVENISQYHNNLREGVILAHLIWDTLVFRDPRTGEYKPQL 93 + PALA KANDTLVYASDSE NISQYHNN+REGVILAHLIWDTLV+RDPRTG+YKPQL Sbjct: 32 VPAPALAGKANDTLVYASDSEAPNISQYHNNVREGVILAHLIWDTLVWRDPRTGDYKPQL 91 Query: 94 ATAWKWESPTALVMDLRQGVQFQNGDKFSADDVVFTFNYAVSNESKAVTRQNTDWIKDVE 153 A+AWKWESPTALVMDLRQGVQFQNGD F+A+DV FTFNYAVS+ES+ +TRQN DWIK V+ Sbjct: 92 ASAWKWESPTALVMDLRQGVQFQNGDPFTAEDVAFTFNYAVSSESRVITRQNVDWIKSVD 151 Query: 154 KLGDYKVRINLKRPFPAALEYLAGPLPIYPGVYFKKLGLEGFSKAPIGTGPYKATSVVPG 213 KLGDYKVRINLK+PFPAALEYLAGPLPIYPG YF+K+GLEGF+KAPIGTGPYK SV PG Sbjct: 152 KLGDYKVRINLKQPFPAALEYLAGPLPIYPGAYFRKVGLEGFAKAPIGTGPYKVVSVTPG 211 Query: 214 QGVTLVRNPNYFKESPQGQPKIGNIKFVVIPDPETRSAQLMTGAIDWIWRVPADQAESLK 273 +GV++VRN NYFK+SPQGQPKIGNIKFVVIPDPETRSAQLMTGAIDWIWRVPADQAESLK Sbjct: 212 RGVSMVRNGNYFKDSPQGQPKIGNIKFVVIPDPETRSAQLMTGAIDWIWRVPADQAESLK 271 Query: 274 TTPKITVQSGETMRVGFLTIDATGTSGPNSPFKDLRVRQAVNYAINRKGIADNLVRGGSQ 333 +TP ITVQSGETMRVGFL IDA G S P+SPFKD+RVRQAVN+AINR+GIADNLVRGGS+ Sbjct: 272 STPGITVQSGETMRVGFLVIDAAGNSSPHSPFKDVRVRQAVNHAINRQGIADNLVRGGSK 331 Query: 334 PVYTACFRTQFGCDAKAVINYEYNPAKAKELLAAAGYPNGFDTEIYAYREREFAEAIIGD 393 PVYTACFRTQFGCD K V++Y+YNPAKAKELL AAGY NGFDT++YAYREREFAEAI+GD Sbjct: 332 PVYTACFRTQFGCDDKVVVHYDYNPAKAKELLRAAGYANGFDTDLYAYREREFAEAIVGD 391 Query: 394 LHKVGIRARLRYMKFAALLTEYRSGKTPLTFQTWASFSINDASAFTGVYFKGNADDITKD 453 LHKVGIRARL YMK A+ EYR GK P+TF W S+SIND SAFTGVYFKG++DDI KD Sbjct: 392 LHKVGIRARLHYMKHDAMQVEYRGGKAPMTFYAWGSYSINDTSAFTGVYFKGSSDDIVKD 451 Query: 454 PQLRQWLETADNSVDPAVRKTNYTKSLESISRQAFMAPMFSYSTFYAYNSQLKFQGYPDE 513 PQLRQWLETAD S DPAVRKTNY K+L ISRQA++APMFSYST+YA++S L+FQGYPDE Sbjct: 452 PQLRQWLETADTSTDPAVRKTNYAKALALISRQAYLAPMFSYSTYYAHSSALRFQGYPDE 511 Query: 514 LPRFYEASWK 523 LPRF+EASWK Sbjct: 512 LPRFHEASWK 521 >ref|YP_003776573.1| dipeptide ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64665.1| ABC-type dipeptide transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 512 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/484 (85%), Positives = 449/484 (92%) Query: 40 ANKANDTLVYASDSEVENISQYHNNLREGVILAHLIWDTLVFRDPRTGEYKPQLATAWKW 99 A KANDTLVYASDSEVENISQYHNNLREGVILAHLIWDTL++RDP+T EYKPQLATAWKW Sbjct: 29 AGKANDTLVYASDSEVENISQYHNNLREGVILAHLIWDTLIYRDPKTNEYKPQLATAWKW 88 Query: 100 ESPTALVMDLRQGVQFQNGDKFSADDVVFTFNYAVSNESKAVTRQNTDWIKDVEKLGDYK 159 ESPTALV+DLRQGVQFQNGDKFSADDVVFTFNYAVS ESKAVTRQNTDWIK V+KL DYK Sbjct: 89 ESPTALVLDLRQGVQFQNGDKFSADDVVFTFNYAVSPESKAVTRQNTDWIKSVDKLADYK 148 Query: 160 VRINLKRPFPAALEYLAGPLPIYPGVYFKKLGLEGFSKAPIGTGPYKATSVVPGQGVTLV 219 VRINLK PFPAALEYLAGPLPIYP YFKK+GLEGFSKAPIGTGPYK TSV PGQGVTLV Sbjct: 149 VRINLKGPFPAALEYLAGPLPIYPAAYFKKVGLEGFSKAPIGTGPYKVTSVTPGQGVTLV 208 Query: 220 RNPNYFKESPQGQPKIGNIKFVVIPDPETRSAQLMTGAIDWIWRVPADQAESLKTTPKIT 279 +NP YFK+SPQGQP IGNIKFVVIPDPETR+AQLMTGAIDWIWRVP DQA+SLKT PK+ Sbjct: 209 KNPGYFKDSPQGQPTIGNIKFVVIPDPETRAAQLMTGAIDWIWRVPPDQADSLKTNPKLA 268 Query: 280 VQSGETMRVGFLTIDATGTSGPNSPFKDLRVRQAVNYAINRKGIADNLVRGGSQPVYTAC 339 VQSGETMR+GF+T+D TGTS PNSPFKD+RVRQAVN+AINRKG ADNL+RGGSQPVYTAC Sbjct: 269 VQSGETMRIGFITLDTTGTSAPNSPFKDVRVRQAVNHAINRKGYADNLMRGGSQPVYTAC 328 Query: 340 FRTQFGCDAKAVINYEYNPAKAKELLAAAGYPNGFDTEIYAYREREFAEAIIGDLHKVGI 399 FRTQFGCD+ A I Y+YNPAKAKELLAAAGYPNGFDT+IYAYRERE AEAIIGDL KVGI Sbjct: 329 FRTQFGCDSNAAIKYDYNPAKAKELLAAAGYPNGFDTDIYAYREREIAEAIIGDLRKVGI 388 Query: 400 RARLRYMKFAALLTEYRSGKTPLTFQTWASFSINDASAFTGVYFKGNADDITKDPQLRQW 459 RARL YMKFAAL TEYRSGKTP++F +W SFS+ND SAF GVYFKG ADDITKDPQL+Q+ Sbjct: 389 RARLHYMKFAALQTEYRSGKTPMSFYSWGSFSMNDTSAFAGVYFKGGADDITKDPQLQQY 448 Query: 460 LETADNSVDPAVRKTNYTKSLESISRQAFMAPMFSYSTFYAYNSQLKFQGYPDELPRFYE 519 L+TAD S+DPAVRK NY+K+ E IS+QA++APMFSYST+YAYN+QL FQGYPDELPRFYE Sbjct: 449 LQTADTSIDPAVRKANYSKAQELISKQAYVAPMFSYSTYYAYNAQLNFQGYPDELPRFYE 508 Query: 520 ASWK 523 ASWK Sbjct: 509 ASWK 512 >ref|YP_003749701.1| extracellular solute-binding protein, family 5 precursor [Ralstonia solanacearum PSI07] emb|CBJ35070.1| Extracellular solute-binding protein, family 5 precursor [Ralstonia solanacearum PSI07] Length = 514 Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/512 (71%), Positives = 432/512 (84%), Gaps = 2/512 (0%) Query: 14 AWVHNARHALLLAGAAATLS--ISTPALANKANDTLVYASDSEVENISQYHNNLREGVIL 71 A V R L+ A A S +++PA A+KANDTLVYASDSEVENIS YHNNLREGV+L Sbjct: 3 AHVIPVRSFLMAATVCAVSSAFVASPAHASKANDTLVYASDSEVENISPYHNNLREGVVL 62 Query: 72 AHLIWDTLVFRDPRTGEYKPQLATAWKWESPTALVMDLRQGVQFQNGDKFSADDVVFTFN 131 A +++DTL++RDP++GEYKPQLATAWKWESPTALV+DLRQGV FQNGD+FSADDVVFTFN Sbjct: 63 ARMVFDTLLYRDPKSGEYKPQLATAWKWESPTALVLDLRQGVSFQNGDRFSADDVVFTFN 122 Query: 132 YAVSNESKAVTRQNTDWIKDVEKLGDYKVRINLKRPFPAALEYLAGPLPIYPGVYFKKLG 191 Y VS ESK VTRQN DWIK EKLGD KVR++LK PFPAALEYL+GP PI+P YFKK+G Sbjct: 123 YVVSPESKVVTRQNVDWIKSAEKLGDDKVRLHLKAPFPAALEYLSGPTPIFPAAYFKKVG 182 Query: 192 LEGFSKAPIGTGPYKATSVVPGQGVTLVRNPNYFKESPQGQPKIGNIKFVVIPDPETRSA 251 LEGFSKAP+GTGPYK T+V PGQGVT+V+NP YFK+SPQGQPKIG +KFV+IPDPETR A Sbjct: 183 LEGFSKAPVGTGPYKVTAVTPGQGVTMVKNPGYFKDSPQGQPKIGTLKFVIIPDPETRVA 242 Query: 252 QLMTGAIDWIWRVPADQAESLKTTPKITVQSGETMRVGFLTIDATGTSGPNSPFKDLRVR 311 QLMTGA+DWIWRVP+DQA++L++ P +TVQS ETMRVGFL +DA G + P SPFKD+RVR Sbjct: 243 QLMTGAVDWIWRVPSDQADALRSMPNLTVQSSETMRVGFLMMDARGAADPKSPFKDVRVR 302 Query: 312 QAVNYAINRKGIADNLVRGGSQPVYTACFRTQFGCDAKAVINYEYNPAKAKELLAAAGYP 371 QAVNYAINR+ +A NLVRGGSQ V C+RTQ GC+AK V Y Y+PAKA+ LLA AGYP Sbjct: 303 QAVNYAINREAMAKNLVRGGSQAVPVVCYRTQVGCEAKGVTVYPYDPAKARALLAQAGYP 362 Query: 372 NGFDTEIYAYREREFAEAIIGDLHKVGIRARLRYMKFAALLTEYRSGKTPLTFQTWASFS 431 NGF+T+IYAYRER+FAEA+IGDL KVGI+ARLRYMK+AAL +YR GK PLTFQTW S S Sbjct: 363 NGFETDIYAYRERDFAEAVIGDLQKVGIKARLRYMKYAALQGDYRGGKAPLTFQTWGSNS 422 Query: 432 INDASAFTGVYFKGNADDITKDPQLRQWLETADNSVDPAVRKTNYTKSLESISRQAFMAP 491 +NDASA GV+FKG ADDI KD ++ +LETAD++ D AVRK NY K+L+ I+RQA+ AP Sbjct: 423 VNDASASLGVWFKGGADDIAKDATVKTYLETADSASDAAVRKANYAKALDLIARQAYAAP 482 Query: 492 MFSYSTFYAYNSQLKFQGYPDELPRFYEASWK 523 +F+YST YAY SQL FQ YPDE+PRFY ASWK Sbjct: 483 LFTYSTSYAYTSQLSFQAYPDEVPRFYSASWK 514 >ref|ZP_02367420.1| extracellular solute-binding protein, family 5 [Burkholderia oklahomensis C6786] Length = 514 Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/495 (73%), Positives = 417/495 (84%) Query: 29 AATLSISTPALANKANDTLVYASDSEVENISQYHNNLREGVILAHLIWDTLVFRDPRTGE 88 A LS+S A A +ANDTLVYASDSE ENIS YHNNLREGVI+AH+ WDTL++RDP+TG Sbjct: 20 ALLLSLSPAAHAGRANDTLVYASDSEPENISPYHNNLREGVIIAHMAWDTLIYRDPKTGA 79 Query: 89 YKPQLATAWKWESPTALVMDLRQGVQFQNGDKFSADDVVFTFNYAVSNESKAVTRQNTDW 148 YKP LATAWKWESPT+L++DLR+ V F NGDKF+ADDVVFTFNY V+ +SK VTRQNTDW Sbjct: 80 YKPALATAWKWESPTSLIVDLRRDVTFHNGDKFTADDVVFTFNYVVAPDSKVVTRQNTDW 139 Query: 149 IKDVEKLGDYKVRINLKRPFPAALEYLAGPLPIYPGVYFKKLGLEGFSKAPIGTGPYKAT 208 I+ EK GDY+VRI LK PFPAALEYL+GP PIYP YFKK+GL+GF KAP+GTGPYK T Sbjct: 140 IQSAEKTGDYQVRIRLKAPFPAALEYLSGPTPIYPTAYFKKVGLQGFGKAPVGTGPYKIT 199 Query: 209 SVVPGQGVTLVRNPNYFKESPQGQPKIGNIKFVVIPDPETRSAQLMTGAIDWIWRVPADQ 268 +V PG GVT+V+NPNYFK+SP GQPKIG ++FVVIPDPETR+AQLMTGA+DWIWRVPADQ Sbjct: 200 AVTPGVGVTMVKNPNYFKDSPLGQPKIGTVRFVVIPDPETRAAQLMTGAVDWIWRVPADQ 259 Query: 269 AESLKTTPKITVQSGETMRVGFLTIDATGTSGPNSPFKDLRVRQAVNYAINRKGIADNLV 328 A+SLK P +TVQSGETMRVG+L++DA G S PNSPFKD RVRQAVNYAINR +A NLV Sbjct: 260 ADSLKAMPNLTVQSGETMRVGYLSMDAAGASAPNSPFKDARVRQAVNYAINRGALAKNLV 319 Query: 329 RGGSQPVYTACFRTQFGCDAKAVINYEYNPAKAKELLAAAGYPNGFDTEIYAYREREFAE 388 RGGSQPVY CFRTQFGCD V+ Y+YNPAKA+ELL AAGYPNGFDT++YAYRERE+AE Sbjct: 320 RGGSQPVYAPCFRTQFGCDTSGVVKYDYNPAKARELLKAAGYPNGFDTDLYAYREREYAE 379 Query: 389 AIIGDLHKVGIRARLRYMKFAALLTEYRSGKTPLTFQTWASFSINDASAFTGVYFKGNAD 448 A+IGDL KVGI ARL Y+++AAL T RSGKTPLTFQ W SFS+NDASAF GVYFKG D Sbjct: 380 AMIGDLRKVGINARLHYLQYAALRTAQRSGKTPLTFQAWGSFSVNDASAFVGVYFKGGPD 439 Query: 449 DITKDPQLRQWLETADNSVDPAVRKTNYTKSLESISRQAFMAPMFSYSTFYAYNSQLKFQ 508 D KD + +WL+ AD S DPAVRK NY K+L IS QA+ AP+FSYST YAY S L F+ Sbjct: 440 DSAKDATVEKWLDAADTSNDPAVRKANYAKALTRISEQAYWAPLFSYSTNYAYTSALNFK 499 Query: 509 GYPDELPRFYEASWK 523 YPDELPRFYEASWK Sbjct: 500 AYPDELPRFYEASWK 514 >ref|ZP_02468218.1| extracellular solute-binding protein, family 5 [Burkholderia thailandensis MSMB43] Length = 514 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/492 (73%), Positives = 415/492 (84%) Query: 32 LSISTPALANKANDTLVYASDSEVENISQYHNNLREGVILAHLIWDTLVFRDPRTGEYKP 91 LS+ A A +ANDTLVYASDSE ENIS YHNNLREGVI+AH+ WDTL++RDP+TG YKP Sbjct: 23 LSLPGAAHAGRANDTLVYASDSEPENISPYHNNLREGVIVAHMAWDTLIYRDPKTGAYKP 82 Query: 92 QLATAWKWESPTALVMDLRQGVQFQNGDKFSADDVVFTFNYAVSNESKAVTRQNTDWIKD 151 +LATAWKWESPT+LV+DLR+GV F NGDKF+ADDVVFTFNY V+ +SK VTRQNTDWI+ Sbjct: 83 ELATAWKWESPTSLVVDLRRGVTFHNGDKFTADDVVFTFNYVVAPDSKVVTRQNTDWIQS 142 Query: 152 VEKLGDYKVRINLKRPFPAALEYLAGPLPIYPGVYFKKLGLEGFSKAPIGTGPYKATSVV 211 EK GDY+VRI LK PFPAALEYL+GP PIYP YF+K+GL+GFSKAP+GTGPY+ +V Sbjct: 143 AEKTGDYQVRIRLKAPFPAALEYLSGPTPIYPAAYFRKVGLQGFSKAPVGTGPYRIAAVT 202 Query: 212 PGQGVTLVRNPNYFKESPQGQPKIGNIKFVVIPDPETRSAQLMTGAIDWIWRVPADQAES 271 PG GVT+V+NPNYFK+SP GQPKIG ++FVVIPDPETR+AQLMTGA+DWIWRVPADQA+S Sbjct: 203 PGVGVTMVKNPNYFKDSPLGQPKIGTVRFVVIPDPETRAAQLMTGAVDWIWRVPADQADS 262 Query: 272 LKTTPKITVQSGETMRVGFLTIDATGTSGPNSPFKDLRVRQAVNYAINRKGIADNLVRGG 331 LK P +TVQSGETMRVG+L++DA G S PNSPFKD RVRQAVNYAINR +A NLVRGG Sbjct: 263 LKAMPNLTVQSGETMRVGYLSMDAAGASAPNSPFKDARVRQAVNYAINRGALAKNLVRGG 322 Query: 332 SQPVYTACFRTQFGCDAKAVINYEYNPAKAKELLAAAGYPNGFDTEIYAYREREFAEAII 391 SQPVY CFRTQFGCD V+ Y+YNPAKA+ELL AAGYPNGFDT++YAYRERE+AEA+I Sbjct: 323 SQPVYAPCFRTQFGCDTSGVVKYDYNPAKARELLKAAGYPNGFDTDLYAYREREYAEAMI 382 Query: 392 GDLHKVGIRARLRYMKFAALLTEYRSGKTPLTFQTWASFSINDASAFTGVYFKGNADDIT 451 GDL KVGI ARL Y+++AAL T RSGKTPLTFQ W SFS+NDASAF VYFKG DD Sbjct: 383 GDLRKVGINARLHYLQYAALRTAQRSGKTPLTFQAWGSFSVNDASAFVSVYFKGGPDDTA 442 Query: 452 KDPQLRQWLETADNSVDPAVRKTNYTKSLESISRQAFMAPMFSYSTFYAYNSQLKFQGYP 511 KD + +WL AD S DPAVRKTNY K+L IS QA+ AP+FSYST YAY S L F YP Sbjct: 443 KDAAVEKWLAAADTSNDPAVRKTNYAKALARISEQAYWAPLFSYSTNYAYASALNFNAYP 502 Query: 512 DELPRFYEASWK 523 DELPRFYEASWK Sbjct: 503 DELPRFYEASWK 514