BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0024.p (481 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352716.1| outer membrane protein [Janthinobacterium sp... 541 e-152 ref|ZP_08400807.1| RND efflux system outer membrane lipoprotein ... 448 e-124 ref|YP_004847585.1| cation/multidrug efflux system, outer membra... 444 e-122 ref|ZP_03697309.1| RND efflux system, outer membrane lipoprotein... 442 e-122 ref|YP_983105.1| RND efflux system outer membrane lipoprotein [P... 440 e-121 >ref|YP_001352716.1| outer membrane protein [Janthinobacterium sp. Marseille] gb|ABR91563.1| outer membrane protein [Janthinobacterium sp. Marseille] Length = 476 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 270/477 (56%), Positives = 363/477 (76%), Gaps = 11/477 (2%) Query: 7 SLRTIAGIS---LISASLAACSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASI 63 +LR + +S ++S+ L CSLAP Y++P PV+ W + E S A+ I Sbjct: 5 NLRVVVQLSYATVLSSILVGCSLAPVYERPDLPVSKTWPDQRLANE---RNSPDVTASEI 61 Query: 64 AWTDFFQDAQLKSVIAAALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQR 123 W +FF D L VI AL++NRDLR+A LNI+RARA+Y +Q AD++P++ + +GARQR Sbjct: 62 DWKEFFIDQNLSQVIQIALNNNRDLRVAALNIDRARALYGVQGADRLPSVGVGTSGARQR 121 Query: 124 LPADVNPTGKAGVNSSYFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLI 183 PAD+N G + V S+Y AG+G+ +FE+D FGR++NLS+AAL+RY+AT++A+RSAQI+LI Sbjct: 122 TPADLNDKGFSDVTSTYSAGIGITSFELDFFGRIKNLSQAALERYIATDEARRSAQIALI 181 Query: 184 AEVANTYEALVADRRLLQLTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKA 243 +EVA Y+AL AD RL QL NTL++R DS+ RQ+ L +GASSE DLRQ+ESL EAA+ Sbjct: 182 SEVAMRYQALAADHRLWQLANNTLSTRLDSHARQQSLLEQGASSELDLRQSESLLEAARV 241 Query: 244 ARAQQERRKTLDENALTVLVGHPLAADI---GTANATSAEQVLPDLPAGLPSDLLTARPD 300 A AQQ R++ +D+NAL +LVG + + G ++A A +L D+P GLPSDL++ RPD Sbjct: 242 ALAQQTRQRAVDQNALRLLVGATIDPSLLPSGMSDALPA--MLADIPVGLPSDLISTRPD 299 Query: 301 ILQQEAVLRSQNANIGAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPI 360 I Q EA+LRS+NA+IGAARAAFFPRISLTG+ G++SS+LSGLF++GSRSWSF+PQ+S+PI Sbjct: 300 IRQHEAILRSENASIGAARAAFFPRISLTGSLGTSSSELSGLFEAGSRSWSFLPQVSLPI 359 Query: 361 FEGGRNIANLNVAETDKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAES 420 F+ GRN ANLNVA+ D+ IA+A+YEK++Q+AFREVADALAG TL +E A AQE AE Sbjct: 360 FDVGRNRANLNVAKADRDIAIAEYEKSIQIAFREVADALAGTDTLKEELRASTAQERAER 419 Query: 421 ARYGFARSRYEAGYSSYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGGWK 477 RY ++ RYE+GY+SYLE+LDAQRSLFAIQQ++I +LAE+Q +I LYK LGGGWK Sbjct: 420 VRYVLSKQRYESGYASYLEFLDAQRSLFAIQQKTIVTELAEMQNKIGLYKALGGGWK 476 >ref|ZP_08400807.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] gb|EGJ09140.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] Length = 477 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 246/472 (52%), Positives = 325/472 (68%), Gaps = 17/472 (3%) Query: 9 RTIAGISLISAS-LAAC-SLAPSYQQPAFPVAAHWQNDLQKAEPAGTQS-DTRQAASIAW 65 R G++L++A+ LA C +LAP YQ+PA PVA + E GT + AA + W Sbjct: 5 RIFPGLTLVAAAVLAGCGTLAPDYQRPAAPVAGAF------PEAGGTTAPGAVAAADLPW 58 Query: 66 TDFFQDAQLKSVIAAALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLP 125 FF+D +LK ++ AL +NRDLR+A LNIE+ARA Y +Q AD P L + +G R Sbjct: 59 QQFFRDERLKRLVGIALANNRDLRVAVLNIEQARAQYGVQRADLFPTLGVGVSGNRV--- 115 Query: 126 ADVNPTGKAGVNSSYFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAE 185 + +G+NS+Y AG+ ++++E+DLFGRVR+L+ AAL YLATE+A+++ QI LIA Sbjct: 116 -----STDSGINSTYQAGLAVSSYELDLFGRVRSLNNAALASYLATEEARKAVQIGLIAS 170 Query: 186 VANTYEALVADRRLLQLTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAAR 245 VAN Y AL AD LL++T TLA+RA+S + + + GASS+ DLRQA+SL+EAA+A Sbjct: 171 VANGYLALQADDELLRVTRETLATRAESLKLTQLRFDVGASSQLDLRQAQSLYEAARATH 230 Query: 246 AQQERRKTLDENALTVLVGHPLAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQE 305 AQ R++ DENAL +L+G PL D+ A S + LP+LPAGLPS +LT RPD+LQ E Sbjct: 231 AQLLRQRAQDENALVLLLGQPLPGDLPAALPLSEQAALPELPAGLPSQVLTRRPDVLQAE 290 Query: 306 AVLRSQNANIGAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGR 365 L + NA IGAARAAFFP+I+LT GSASS+LSGLF GS W+F PQ+ +PIF+ GR Sbjct: 291 QQLIAANARIGAARAAFFPQITLTATAGSASSELSGLFKGGSTGWTFAPQLLMPIFDAGR 350 Query: 366 NIANLNVAETDKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGF 425 N ANL+ A + IAVAQY+K VQ AFREVADALAGRATL ++ A++AQ AE R Sbjct: 351 NRANLDSANAGRDIAVAQYDKAVQAAFREVADALAGRATLGEQLAALQAQVKAEQGRVEL 410 Query: 426 ARSRYEAGYSSYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGGWK 477 A RY G +SYL+ LDAQRSLFA QQ +QV+ + Q +TLY+VLGGGW+ Sbjct: 411 AELRYRNGAASYLDLLDAQRSLFAAQQSEVQVRALQAQNLVTLYRVLGGGWR 462 >ref|YP_004847585.1| cation/multidrug efflux system, outer membrane channel TolC [Pseudogulbenkiania sp. NH8B] dbj|BAK77171.1| cation/multidrug efflux system, outer membrane channel TolC [Pseudogulbenkiania sp. NH8B] Length = 488 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 234/453 (51%), Positives = 307/453 (67%) Query: 24 CSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASIAWTDFFQDAQLKSVIAAALD 83 CSLAP+YQ+PA PVA W N TQ+ AA I W +FF DA+L+ +I AL Sbjct: 18 CSLAPTYQRPAAPVAGQWPNGPAYGGDTATQATKGNAADIGWREFFADARLQKLIELALA 77 Query: 84 HNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPADVNPTGKAGVNSSYFAG 143 +NRDLR+A LN+E+ RA Y IQ AD P + G+G RQRLPAD++ +G+AGV+ Y A Sbjct: 78 NNRDLRVAMLNVEKTRAQYQIQRADLFPAIDATGSGTRQRLPADLSSSGRAGVSGKYSAS 137 Query: 144 VGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEVANTYEALVADRRLLQLT 203 VG A+E+DLFGRV++L AL++Y A+ +AQ+SAQISL++EVA Y L A ++ Sbjct: 138 VGFTAYELDLFGRVQSLKNEALEQYFASGEAQKSAQISLVSEVARQYLTLRALDEQQKVV 197 Query: 204 ENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAARAQQERRKTLDENALTVLV 263 +TL ++ SY+ K+ + G + DL A+S + AK+ A +++ ENAL +LV Sbjct: 198 TDTLTAQQSSYDLTKKRFDVGTVTALDLSTADSQVQTAKSNLASLMQQRAQAENALVLLV 257 Query: 264 GHPLAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQEAVLRSQNANIGAARAAFF 323 G PL AD+ NA A+ +L DLPAGLPSDLL RPDI Q E L++ NA+IGAARAAFF Sbjct: 258 GQPLPADLPQGNAFDAQGLLADLPAGLPSDLLERRPDIAQAEHQLKAANADIGAARAAFF 317 Query: 324 PRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGRNIANLNVAETDKKIAVAQ 383 P ISLTG++G+ASS+LS LF G +WSFIPQI++PIF+ G+N A L+V+ T KKIAVAQ Sbjct: 318 PSISLTGSYGTASSELSNLFKGGQLAWSFIPQINLPIFDWGKNAAGLDVSTTSKKIAVAQ 377 Query: 384 YEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGFARSRYEAGYSSYLEYLDA 443 YEK+VQ AFREV+DAL RA L + A +A +E+ RY A RY G S L LDA Sbjct: 378 YEKSVQSAFREVSDALTARAMLEQQIAAQEALVKSETQRYQLAELRYRNGVDSALTLLDA 437 Query: 444 QRSLFAIQQQSIQVQLAELQTRITLYKVLGGGW 476 QRSL++ QQ IQ +LA L ++TLYK LGGGW Sbjct: 438 QRSLYSAQQGLIQARLARLTNQVTLYKALGGGW 470 >ref|ZP_03697309.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gb|EEG09795.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 488 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 233/453 (51%), Positives = 308/453 (67%) Query: 24 CSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASIAWTDFFQDAQLKSVIAAALD 83 CSLAP+YQ+PA PVA W + TQ+ AA I W +FF DA+L+ +I AL Sbjct: 18 CSLAPTYQRPAAPVAGQWPSGPAYGGDTATQATKGNAADIGWREFFADARLQKLIELALA 77 Query: 84 HNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPADVNPTGKAGVNSSYFAG 143 +NRDLR+A LN+E+ RA Y IQ AD P + G+G RQRLPAD++ +G+AGV+ Y A Sbjct: 78 NNRDLRVAMLNVEKTRAQYQIQRADLFPAIDATGSGTRQRLPADLSSSGRAGVSGKYSAS 137 Query: 144 VGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEVANTYEALVADRRLLQLT 203 VG A+E+DLFGRV++L AL++Y A+ +AQ+SAQISL++EVA+ Y L A ++ Sbjct: 138 VGFTAYELDLFGRVQSLKNEALEQYFASGEAQKSAQISLVSEVASQYLTLRALDEQQKVV 197 Query: 204 ENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAARAQQERRKTLDENALTVLV 263 +TL ++ SY+ K+ + G + DL A+S + AK+ A +++ ENAL +LV Sbjct: 198 TDTLTAQQSSYDLTKKRFDVGTVTALDLSTADSQVQTAKSNLASLMQQRAQAENALVLLV 257 Query: 264 GHPLAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQEAVLRSQNANIGAARAAFF 323 G PL AD+ NA A+ +L DLPAGLPSDLL RPDI Q E L++ NA+IGAARAAFF Sbjct: 258 GQPLPADLPQGNAFDAQGLLADLPAGLPSDLLERRPDIAQAEHQLKAANADIGAARAAFF 317 Query: 324 PRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGRNIANLNVAETDKKIAVAQ 383 P ISLTG++G+ASS+LS LF G +WSFIPQI++PIF+ G+N A L+V+ T KKIAVAQ Sbjct: 318 PSISLTGSYGTASSELSNLFKGGQLAWSFIPQINLPIFDWGKNAAGLDVSTTGKKIAVAQ 377 Query: 384 YEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGFARSRYEAGYSSYLEYLDA 443 YEK+VQ AFREV+DAL RA L + A +A +E+ RY A RY G S L LDA Sbjct: 378 YEKSVQSAFREVSDALTARAMLEQQIAAQEALVKSETQRYQLAELRYRNGVDSALTLLDA 437 Query: 444 QRSLFAIQQQSIQVQLAELQTRITLYKVLGGGW 476 QRSL++ QQ IQ +LA L ++TLYK LGGGW Sbjct: 438 QRSLYSAQQGLIQARLARLTNQVTLYKALGGGW 470 >ref|YP_983105.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gb|ABM38184.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 495 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 235/462 (50%), Positives = 312/462 (67%), Gaps = 15/462 (3%) Query: 24 CSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQ---AASIAWTDFFQDAQLKSVIAA 80 CS+ P+Y++PA PVAA W A +GT Q AA I W FF D +L+ +I A Sbjct: 24 CSMIPTYERPAAPVAADWPALSATAALSGTSGTANQGIAAADIEWQSFFSDPRLRQLIDA 83 Query: 81 ALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPADVNPTGKA-GVNSS 139 +L +NRDLR+A LNIE+ARA + I+ ADQ P + G+RQ P+ + S+ Sbjct: 84 SLRNNRDLRIAVLNIEQARAQFQIRRADQYPTVNAAATGSRQ-------PSSSGDSITST 136 Query: 140 YFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEVANTYEALVADRRL 199 Y AG+ + ++E D FGRV +L EAAL +YLATE+ +++ QISL+A VANTY +L+AD L Sbjct: 137 YTAGLAMTSYEFDFFGRVASLKEAALAQYLATEEGRKTTQISLVAAVANTYLSLLADEEL 196 Query: 200 LQLTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAARAQQERRKTLDENAL 259 + +T TLA+R DS+ K + G SSE D+RQAESL EAA+ + AQ R++ LD+NAL Sbjct: 197 IAITRQTLATREDSFRLSKLRFDNGVSSELDVRQAESLIEAARVSLAQLIRQRALDQNAL 256 Query: 260 TVLVGHP----LAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQEAVLRSQNANI 315 +L+G P LA + + ++ D+PAGLPSDLLT RPD+ Q E +L + NANI Sbjct: 257 VLLLGQPATGELAVALPAGKGLADMPMMVDVPAGLPSDLLTRRPDVRQAEQLLLASNANI 316 Query: 316 GAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGRNIANLNVAET 375 GAARAAFFP+ISLT + GSASS L LF SGS W+ PQ+ +PIF+ GRN A L+ A Sbjct: 317 GAARAAFFPKISLTASAGSASSHLGDLFKSGSFGWTLAPQLLLPIFDAGRNRAGLDSANA 376 Query: 376 DKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGFARSRYEAGYS 435 + IAVAQYEK++Q AFREVADALAGRATL ++ A +AQ AE R+ + RY+ G + Sbjct: 377 GRDIAVAQYEKSIQTAFREVADALAGRATLGEQLRAQQAQANAEGVRFKLSDLRYQNGIA 436 Query: 436 SYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGGWK 477 S L+ LDAQRSLF QQ +Q +LA+LQ+++TLYKVLGGGWK Sbjct: 437 SQLDLLDAQRSLFTAQQAVVQTRLAQLQSQVTLYKVLGGGWK 478