BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0020.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352713.1| MarR family transcriptional regulator [Janth...   157   4e-37
ref|YP_373096.1| MarR family transcriptional regulator [Burkhold...   143   1e-32
ref|YP_001810318.1| MarR family transcriptional regulator [Burkh...   142   2e-32
ref|YP_777370.1| MarR family transcriptional regulator [Burkhold...   140   5e-32
ref|ZP_02910317.1| transcriptional regulator, MarR family [Burkh...   140   8e-32

>ref|YP_001352713.1| MarR family transcriptional regulator [Janthinobacterium sp.
           Marseille]
 gb|ABR91561.1| transcriptional regulator, MarR family [Janthinobacterium sp.
           Marseille]
          Length = 147

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/138 (55%), Positives = 102/138 (73%), Gaps = 1/138 (0%)

Query: 3   STPSLTDCNLFATKQAARFITQLYERHLAPVNVTSSQVTLLAVIHERPEITMTELSEMVV 62
           STP    CN FA ++AARFITQ+YERHL    +T SQ T+L V+  RP I+M EL+E + 
Sbjct: 9   STPVANVCNCFAARKAARFITQIYERHLQKAGITGSQYTILTVVRSRPGISMLELAEELG 68

Query: 63  MDRTSLVRAIQPLSRDGYVVQK-SEAGSRKIGLSLSKAGTRKFLDALPHWRAAQKEYEEL 121
           MDRTSLVRA++PL R+ Y+V   SE  SRK+ L+LS+AG  KF ++ PHWRAAQ+E+   
Sbjct: 69  MDRTSLVRALKPLYREAYIVDAPSETDSRKMLLTLSRAGITKFEESDPHWRAAQQEWNNK 128

Query: 122 VGKDRAKFLREELMAVTQ 139
           VG +RAK LREEL+++T+
Sbjct: 129 VGSERAKALREELISLTE 146


>ref|YP_373096.1| MarR family transcriptional regulator [Burkholderia sp. 383]
 gb|ABB12452.1| transcriptional regulator, MarR family [Burkholderia sp. 383]
          Length = 154

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 97/139 (69%), Gaps = 1/139 (0%)

Query: 1   MDSTPSLTDCNLFATKQAARFITQLYERHLAPVNVTSSQVTLLAVIHERPEITMTELSEM 60
           M+ T     CN  A +QAARF+TQLYERHLAPV VT +Q +++A +  +P + M+EL++ 
Sbjct: 13  MNDTSIAHACNCLALRQAARFVTQLYERHLAPVGVTPAQFSIMANLMRQPGLLMSELADA 72

Query: 61  VVMDRTSLVRAIQPLSRDGYVV-QKSEAGSRKIGLSLSKAGTRKFLDALPHWRAAQKEYE 119
           +VMDRT+L+RA++PL RDG+V    SE  +R   LSL+K G R F  A   W+AAQ E+E
Sbjct: 73  LVMDRTTLLRALKPLQRDGFVATAASEHDARAHALSLTKLGERTFAQAKVAWQAAQDEFE 132

Query: 120 ELVGKDRAKFLREELMAVT 138
              G+DRAK LR+EL +VT
Sbjct: 133 TQFGRDRAKALRDELFSVT 151


>ref|YP_001810318.1| MarR family transcriptional regulator [Burkholderia ambifaria
           MC40-6]
 gb|ACB66102.1| transcriptional regulator, MarR family [Burkholderia ambifaria
           MC40-6]
          Length = 142

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 1/130 (0%)

Query: 10  CNLFATKQAARFITQLYERHLAPVNVTSSQVTLLAVIHERPEITMTELSEMVVMDRTSLV 69
           CN  A +QAARF+TQLYERHLAPV VT +Q +++A +  RP + M+EL++ +VMDRT+L+
Sbjct: 10  CNCLALRQAARFVTQLYERHLAPVGVTPAQFSIMANLSRRPGLVMSELADTLVMDRTTLL 69

Query: 70  RAIQPLSRDGYV-VQKSEAGSRKIGLSLSKAGTRKFLDALPHWRAAQKEYEELVGKDRAK 128
           RA++PL RDG+V    SE  +R   LSL+K G R +  A   W+AAQ E+E   G+DRAK
Sbjct: 70  RALKPLQRDGFVAAAASEHDARAHALSLTKLGERTYAQAKIAWQAAQDEFETQFGRDRAK 129

Query: 129 FLREELMAVT 138
            LR+EL ++T
Sbjct: 130 ALRDELFSLT 139


>ref|YP_777370.1| MarR family transcriptional regulator [Burkholderia ambifaria AMMD]
 gb|ABI91036.1| transcriptional regulator, MarR family [Burkholderia ambifaria
           AMMD]
          Length = 154

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 94/130 (72%), Gaps = 1/130 (0%)

Query: 10  CNLFATKQAARFITQLYERHLAPVNVTSSQVTLLAVIHERPEITMTELSEMVVMDRTSLV 69
           CN  A +QAARF+TQLYERHLAPV VT +Q +++A +  RP + M+EL++ +VMDRT+L+
Sbjct: 22  CNCLALRQAARFVTQLYERHLAPVGVTPAQFSIMANLSRRPGLVMSELADTLVMDRTTLL 81

Query: 70  RAIQPLSRDGYV-VQKSEAGSRKIGLSLSKAGTRKFLDALPHWRAAQKEYEELVGKDRAK 128
           RA++PL RDG+V    SE  +R   LSL+K G R +  A   W+AAQ E++   G+DRAK
Sbjct: 82  RALKPLQRDGFVAAAASEHDARAHALSLTKLGERTYAQAKVAWQAAQDEFDTQFGRDRAK 141

Query: 129 FLREELMAVT 138
            LR+EL ++T
Sbjct: 142 ALRDELFSLT 151


>ref|ZP_02910317.1| transcriptional regulator, MarR family [Burkholderia ambifaria
           MEX-5]
 gb|EDT38551.1| transcriptional regulator, MarR family [Burkholderia ambifaria
           MEX-5]
          Length = 142

 Score =  140 bits (352), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 94/130 (72%), Gaps = 1/130 (0%)

Query: 10  CNLFATKQAARFITQLYERHLAPVNVTSSQVTLLAVIHERPEITMTELSEMVVMDRTSLV 69
           CN  A +QAARF+TQLYERHLAPV VT +Q +++A +  RP + M+EL++ +VMDRT+L+
Sbjct: 10  CNCLALRQAARFVTQLYERHLAPVGVTPAQFSIMANLSRRPGLVMSELADTLVMDRTTLL 69

Query: 70  RAIQPLSRDGYV-VQKSEAGSRKIGLSLSKAGTRKFLDALPHWRAAQKEYEELVGKDRAK 128
           RA++PL RDG+V    SE  +R   LSL+K G R +  A   W+AAQ E++   G+DRAK
Sbjct: 70  RALKPLQRDGFVAAAASEHDARAHALSLTKLGERIYAQAKVAWQAAQDEFDTQFGRDRAK 129

Query: 129 FLREELMAVT 138
            LR+EL ++T
Sbjct: 130 ALRDELFSLT 139