BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0016.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04762923.1| L-carnitine dehydratase/bile acid-inducible p... 566 e-159 ref|YP_296029.1| L-carnitine dehydratase/bile acid-inducible pro... 566 e-159 ref|YP_367022.1| L-carnitine dehydratase/bile acid-inducible pro... 553 e-155 ref|NP_887167.1| CaiB/BaiF family protein [Bordetella bronchisep... 551 e-155 ref|YP_004127548.1| l-carnitine dehydratase/bile acid-inducible ... 547 e-154 >ref|ZP_04762923.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax delafieldii 2AN] gb|EER60284.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax delafieldii 2AN] Length = 402 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 264/393 (67%), Positives = 326/393 (82%) Query: 1 VKVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDRYIVPVTEGGEGAFFLQ 60 +KVLEGI++LD GR+IAGPFCAALL D+GADVIR+DRVGGSEDR I+PV+E GEGA FLQ Sbjct: 1 MKVLEGIKILDLGRYIAGPFCAALLGDYGADVIRVDRVGGSEDRLILPVSENGEGAQFLQ 60 Query: 61 VNRNKRSLSLDIDSPEGREVVRQLVRTADVVIANMPAKTLESLGLDYESLRQIKPDVILT 120 VNRNKRS+SL+ID PEG++V+ +LVR ADVVIANMP + L++LG+DYESLR+IKPD+ILT Sbjct: 61 VNRNKRSISLEIDQPEGQQVLHELVRRADVVIANMPPRVLQNLGIDYESLRRIKPDIILT 120 Query: 121 ATSAFGSQPAVRHKTGFDGVGQSMSGAVHMAGLPDHPMKAMVPVVDFATAMSCAMGTVLA 180 A++AFG+ PAVR + FDGVGQ++SGAVH+AGLPDHPMKAMVPVVDFATA+SCA+GTV+A Sbjct: 121 ASTAFGTAPAVRDRVAFDGVGQAISGAVHLAGLPDHPMKAMVPVVDFATALSCALGTVMA 180 Query: 181 LYERKTSGLGQEVGASLLRTGLNMSSGALIEEAVLKLDRKASLNRSPNYAPSDIFQTLDG 240 LYERK SG+GQEVGASLL+T LN SS +LIEEAVL+ DRKA++NR+ YAPSDIF+ DG Sbjct: 181 LYERKASGMGQEVGASLLQTALNFSSASLIEEAVLQADRKATMNRAAQYAPSDIFRAKDG 240 Query: 241 WLIVQVIGEVMFKRWACLMGHPEFAEDLRFRDDKARGEQGEYLCSVMAQWCAGRTRKECL 300 W I QVIG MFKRWA L+G PE +D RF+DD RG GEYL +M++WCA TR E L Sbjct: 241 WFITQVIGPAMFKRWARLIGRPELVDDPRFQDDLQRGHHGEYLSDLMSEWCAPMTRAEAL 300 Query: 301 AELEKARIPAGPVYSPREALEDETVNDAESFTWTDYPGVAGKIPLVSPPISLSRTPSSID 360 A+LE ARIPAG V SPRE L+DE+++ AE F +YPGV IP+V PPI LSRTP+++ Sbjct: 301 AKLEGARIPAGAVNSPREVLQDESISAAEPFEMMEYPGVKTPIPIVKPPIFLSRTPAAVV 360 Query: 361 RRAPTSGEHTDDVMQGLGYSAQEIASLRDSGVI 393 RR P +GEHT++V+ +GYS IA L + G++ Sbjct: 361 RRPPLAGEHTNEVLMEIGYSPDAIAQLSERGIV 393 >ref|YP_296029.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia eutropha JMP134] gb|AAZ61185.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia eutropha JMP134] Length = 393 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 266/393 (67%), Positives = 326/393 (82%) Query: 1 VKVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDRYIVPVTEGGEGAFFLQ 60 +KVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDR++ PVT GEGAFFLQ Sbjct: 1 MKVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDRFVAPVTSEGEGAFFLQ 60 Query: 61 VNRNKRSLSLDIDSPEGREVVRQLVRTADVVIANMPAKTLESLGLDYESLRQIKPDVILT 120 VNRNKRS++LD+DS EG+ VVR+L+ DVV+ANMP +T+ +LGLDYESLR++KPD+ILT Sbjct: 61 VNRNKRSITLDLDSEEGQAVVRKLLLNTDVVVANMPPRTIAALGLDYESLRKVKPDIILT 120 Query: 121 ATSAFGSQPAVRHKTGFDGVGQSMSGAVHMAGLPDHPMKAMVPVVDFATAMSCAMGTVLA 180 A+SAFG+ PAVR + GFDGVGQ+MSGAVH+ GLPDHPMK+MVPVVDF+TA+ CA+GT++A Sbjct: 121 ASSAFGADPAVRDRVGFDGVGQAMSGAVHLTGLPDHPMKSMVPVVDFSTALCCALGTMMA 180 Query: 181 LYERKTSGLGQEVGASLLRTGLNMSSGALIEEAVLKLDRKASLNRSPNYAPSDIFQTLDG 240 LYERK+SG GQEVGASLL T L +SSG+LIEEA+ L+R+A++NRSP Y PSDIF+ DG Sbjct: 181 LYERKSSGQGQEVGASLLHTALTLSSGSLIEEALRGLNRQATVNRSPTYGPSDIFRVKDG 240 Query: 241 WLIVQVIGEVMFKRWACLMGHPEFAEDLRFRDDKARGEQGEYLCSVMAQWCAGRTRKECL 300 W+I QVIG MFKRW ++G PE +D RF DD RGE GE L +M+ WCAGRTR+E L Sbjct: 241 WIIAQVIGPAMFKRWTRMVGRPELLDDPRFADDAMRGEHGEVLSDIMSDWCAGRTREEAL 300 Query: 301 AELEKARIPAGPVYSPREALEDETVNDAESFTWTDYPGVAGKIPLVSPPISLSRTPSSID 360 A LE ARIP GPV +PR+ALEDE V + +F DYPG A ++PLV+ P+SLSRT +I Sbjct: 301 AILEGARIPGGPVNTPRQALEDEVVRASGAFHGVDYPGAAAQVPLVATPVSLSRTAPAIA 360 Query: 361 RRAPTSGEHTDDVMQGLGYSAQEIASLRDSGVI 393 RR PT+GEHT++V++ GY+ EI +LR+ GVI Sbjct: 361 RRPPTAGEHTEEVLRDAGYAPGEIVALRERGVI 393 >ref|YP_367022.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia sp. 383] gb|ABB06378.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia sp. 383] Length = 393 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 264/393 (67%), Positives = 316/393 (80%) Query: 1 VKVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDRYIVPVTEGGEGAFFLQ 60 +KVLEGI+VLDFGRFIAGPFC+ALLAD+GADVIRIDRVGG EDR+IVPVTE GEGA FLQ Sbjct: 1 MKVLEGIKVLDFGRFIAGPFCSALLADYGADVIRIDRVGGGEDRFIVPVTEHGEGALFLQ 60 Query: 61 VNRNKRSLSLDIDSPEGREVVRQLVRTADVVIANMPAKTLESLGLDYESLRQIKPDVILT 120 VNRNKRS++LD+DSPEGRE+VR+LV ADVVIANMP +TL+SLGLDY SL IKPDVIL Sbjct: 61 VNRNKRSMTLDLDSPEGREIVRKLVADADVVIANMPPRTLKSLGLDYASLCAIKPDVILV 120 Query: 121 ATSAFGSQPAVRHKTGFDGVGQSMSGAVHMAGLPDHPMKAMVPVVDFATAMSCAMGTVLA 180 A++AFG+ AVR + GFDGVGQ++SGAVH+AG PD P KAMVPVVDFATA SCA+G +LA Sbjct: 121 ASNAFGNSEAVRDRVGFDGVGQALSGAVHIAGTPDRPQKAMVPVVDFATAFSCALGVMLA 180 Query: 181 LYERKTSGLGQEVGASLLRTGLNMSSGALIEEAVLKLDRKASLNRSPNYAPSDIFQTLDG 240 LYER+ SG+GQEV ASLL TGLNM+SGALIEEA+L LDR A+LNR+ YAPSDIF+ DG Sbjct: 181 LYERQRSGMGQEVSASLLCTGLNMASGALIEEALLGLDRHATLNRASGYAPSDIFKAADG 240 Query: 241 WLIVQVIGEVMFKRWACLMGHPEFAEDLRFRDDKARGEQGEYLCSVMAQWCAGRTRKECL 300 W I QVIG MFKRW L+G PE +D RF DD RGE GE+L +M+ WCA +T + L Sbjct: 241 WFITQVIGRPMFKRWTQLVGRPELLDDPRFADDTLRGEHGEFLSDIMSAWCADKTLADAL 300 Query: 301 AELEKARIPAGPVYSPREALEDETVNDAESFTWTDYPGVAGKIPLVSPPISLSRTPSSID 360 A+LEKARIPA PV SPR+ALEDETV A+ W DYPG ++P+ + P++LSRTP I Sbjct: 301 ADLEKARIPASPVNSPRQALEDETVKAADVIRWMDYPGAPKQVPIFATPVTLSRTPPEIH 360 Query: 361 RRAPTSGEHTDDVMQGLGYSAQEIASLRDSGVI 393 R P +GEHTD+++ G+G A +A LR ++ Sbjct: 361 TRPPLTGEHTDEILAGIGLDAGTVADLRARKIV 393 >ref|NP_887167.1| CaiB/BaiF family protein [Bordetella bronchiseptica RB50] emb|CAE31117.1| CaiB/BaiF family protein [Bordetella bronchiseptica RB50] Length = 393 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 266/393 (67%), Positives = 315/393 (80%) Query: 1 VKVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDRYIVPVTEGGEGAFFLQ 60 +KVLEGI+VLDFGRFIAGP+CAALLAD+GADVIRIDRV G EDRYIVPVTEGGEGA FLQ Sbjct: 1 MKVLEGIKVLDFGRFIAGPYCAALLADYGADVIRIDRVEGGEDRYIVPVTEGGEGAMFLQ 60 Query: 61 VNRNKRSLSLDIDSPEGREVVRQLVRTADVVIANMPAKTLESLGLDYESLRQIKPDVILT 120 +NRNKRS++LD+DSP+GRE+VR+LV ADVVIANMP +TL+SLGLDY +L + P +IL Sbjct: 61 LNRNKRSMTLDLDSPQGREIVRKLVAGADVVIANMPPRTLKSLGLDYATLSGVNPGIILV 120 Query: 121 ATSAFGSQPAVRHKTGFDGVGQSMSGAVHMAGLPDHPMKAMVPVVDFATAMSCAMGTVLA 180 A++AFG AVR + GFDGVGQ++SGAV+MAG PD P KAMVPVVDFAT+ +CA+GT+LA Sbjct: 121 ASNAFGDAEAVRDRVGFDGVGQALSGAVYMAGTPDQPQKAMVPVVDFATSFACALGTMLA 180 Query: 181 LYERKTSGLGQEVGASLLRTGLNMSSGALIEEAVLKLDRKASLNRSPNYAPSDIFQTLDG 240 LYERK SG GQEV ASLL TGLNM+SGALIEEA+L LDR+A+LNR+ YAPSDIF+ DG Sbjct: 181 LYERKRSGKGQEVSASLLCTGLNMASGALIEEALLGLDRQATLNRASGYAPSDIFKARDG 240 Query: 241 WLIVQVIGEVMFKRWACLMGHPEFAEDLRFRDDKARGEQGEYLCSVMAQWCAGRTRKECL 300 W I QVIG+ MFKRW L+ PE ED RF DD+ RGE GE L ++M+ WC +T E L Sbjct: 241 WFITQVIGQAMFKRWTRLVERPELFEDARFADDRLRGEHGEVLSAIMSDWCGDKTLDEAL 300 Query: 301 AELEKARIPAGPVYSPREALEDETVNDAESFTWTDYPGVAGKIPLVSPPISLSRTPSSID 360 A+LEKARIPAG V SPR+ALEDETV A W DYPG GK+P+ S P+SLSRTP I Sbjct: 301 AQLEKARIPAGRVNSPRQALEDETVRAANLIQWMDYPGAPGKVPIFSTPVSLSRTPPEIH 360 Query: 361 RRAPTSGEHTDDVMQGLGYSAQEIASLRDSGVI 393 RRAP +GEHT+ ++ LG A+ IA LR VI Sbjct: 361 RRAPLNGEHTEAILAELGVDARAIADLRQRRVI 393 >ref|YP_004127548.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC] gb|ADV00661.1| L-carnitine dehydratase/bile acid-inducible protein F [Alicycliphilus denitrificans BC] Length = 393 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 262/393 (66%), Positives = 317/393 (80%) Query: 1 VKVLEGIRVLDFGRFIAGPFCAALLADFGADVIRIDRVGGSEDRYIVPVTEGGEGAFFLQ 60 +KVLEGI+VLDFGRFIAGP+CAALLAD+GA+VIRIDRV G EDRYIVPVTEGGEGA FLQ Sbjct: 1 MKVLEGIKVLDFGRFIAGPYCAALLADYGAEVIRIDRVEGGEDRYIVPVTEGGEGAMFLQ 60 Query: 61 VNRNKRSLSLDIDSPEGREVVRQLVRTADVVIANMPAKTLESLGLDYESLRQIKPDVILT 120 +NRNKRSL+LD+ SPEGR++VR+LV ADVV+ANMP +TL+SLGLDYESL ++PD+IL Sbjct: 61 LNRNKRSLTLDLASPEGRDIVRKLVAGADVVVANMPPRTLKSLGLDYESLCAVRPDIILV 120 Query: 121 ATSAFGSQPAVRHKTGFDGVGQSMSGAVHMAGLPDHPMKAMVPVVDFATAMSCAMGTVLA 180 A +AFG+ AVR + GFDGVGQ++SGAVH+AG P P KAMVPVVDFAT+ +CA+GTVLA Sbjct: 121 APNAFGTSEAVRDRVGFDGVGQALSGAVHIAGTPGQPQKAMVPVVDFATSFACALGTVLA 180 Query: 181 LYERKTSGLGQEVGASLLRTGLNMSSGALIEEAVLKLDRKASLNRSPNYAPSDIFQTLDG 240 LYERK SG GQEV ASLL TGLNM+SGALIEEA+L LDR A+ NR+ YAPSDIF+ DG Sbjct: 181 LYERKQSGKGQEVNASLLCTGLNMASGALIEEALLGLDRPATRNRASGYAPSDIFKARDG 240 Query: 241 WLIVQVIGEVMFKRWACLMGHPEFAEDLRFRDDKARGEQGEYLCSVMAQWCAGRTRKECL 300 W I QVIG MF+ W L+G PE +D RF DD+ RGE GE+L VM+ WC+ +T ECL Sbjct: 241 WFITQVIGPAMFRNWTRLVGRPELLDDPRFADDRLRGEHGEFLSGVMSDWCSDKTLGECL 300 Query: 301 AELEKARIPAGPVYSPREALEDETVNDAESFTWTDYPGVAGKIPLVSPPISLSRTPSSID 360 A LEKARIPAG V SPR+AL+DETV A+ W DYPG ++P+ + P+SLSRTP I Sbjct: 301 ALLEKARIPAGRVNSPRQALQDETVQAADLIHWMDYPGAPRQVPIFATPVSLSRTPPEIR 360 Query: 361 RRAPTSGEHTDDVMQGLGYSAQEIASLRDSGVI 393 +RAP +GEHTD+++ G+G AQEIA LR ++ Sbjct: 361 QRAPLNGEHTDEILAGIGLGAQEIAGLRQRNIV 393