BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0007.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004153733.1| short-chain dehydrogenase/reductase sdr [Var... 393 e-107 ref|ZP_06845973.1| short-chain dehydrogenase/reductase SDR [Burk... 392 e-107 ref|YP_002943222.1| short-chain dehydrogenase/reductase SDR [Var... 390 e-107 ref|YP_984451.1| short-chain dehydrogenase/reductase SDR [Acidov... 390 e-107 ref|YP_004124837.1| short-chain dehydrogenase/reductase sdr [Ali... 390 e-106 >ref|YP_004153733.1| short-chain dehydrogenase/reductase sdr [Variovorax paradoxus EPS] gb|ADU35622.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus EPS] Length = 301 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/222 (80%), Positives = 203/222 (91%) Query: 1 LFEQAIAAFGRVDGVVNNAGILRDRIFHKMSEEEWDAVLKVHLYGAYYMSRACAAHFKEQ 60 + E A+ +FGR+D VVNNAGILRDR FHKMS +EWDAVLKVHLYGAYY+SRA A HFKEQ Sbjct: 80 IVECAVESFGRIDAVVNNAGILRDRFFHKMSMDEWDAVLKVHLYGAYYVSRAAATHFKEQ 139 Query: 61 NSGSMVHMTSTSGLIGNFGQANYSAAKLGVTALSKSIALDMQKFNVRSNCIAPFAWSRMV 120 N+G+MVHMTSTSGLIGNFGQANY+AAKLG+ ALSKSIALDM KFNVRSNCIAPFAWSRM+ Sbjct: 140 NAGAMVHMTSTSGLIGNFGQANYAAAKLGIVALSKSIALDMLKFNVRSNCIAPFAWSRMI 199 Query: 121 SSVPTDTPEQQARVDKIKQMTPAKIAPLAVYLASERAAQVNGQVFTVRNNEIFLMSQPRP 180 ++PTDT EQ+ARVDKIKQMTPAK+APLAVYLAS+ A+ VNGQ+F+VRNNEI L+SQPRP Sbjct: 200 GAIPTDTDEQRARVDKIKQMTPAKVAPLAVYLASDAASAVNGQIFSVRNNEISLISQPRP 259 Query: 181 VRSVHRSEGWTPESIAEHGMPALAGSFFPLDRSGDIFTWDPV 222 VRSVHRSEGWTP+SIAEH MPA+ SF+PLDRS D+F+WDPV Sbjct: 260 VRSVHRSEGWTPQSIAEHAMPAMRASFYPLDRSADVFSWDPV 301 >ref|ZP_06845973.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1] gb|EFG66405.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1] Length = 306 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 179/222 (80%), Positives = 201/222 (90%) Query: 1 LFEQAIAAFGRVDGVVNNAGILRDRIFHKMSEEEWDAVLKVHLYGAYYMSRACAAHFKEQ 60 + + A+ AFGR+D VVNNAGILRDR FHKMS ++WDAV+KVHLYGAYY+SRA A+ FKEQ Sbjct: 85 IVDTALQAFGRLDSVVNNAGILRDRFFHKMSSDDWDAVIKVHLYGAYYVSRAAASIFKEQ 144 Query: 61 NSGSMVHMTSTSGLIGNFGQANYSAAKLGVTALSKSIALDMQKFNVRSNCIAPFAWSRMV 120 SGS++HMTSTSGLIGNFGQANYSAAKLGV ALSKSIALDMQKFNVRSNCIAPFAWSRM+ Sbjct: 145 ESGSLIHMTSTSGLIGNFGQANYSAAKLGVVALSKSIALDMQKFNVRSNCIAPFAWSRMI 204 Query: 121 SSVPTDTPEQQARVDKIKQMTPAKIAPLAVYLASERAAQVNGQVFTVRNNEIFLMSQPRP 180 SS+PTDTPEQQARV K++QMTPAKIAPLA YLAS+ +A+V+GQ+F VRNNEIFLMSQPRP Sbjct: 205 SSIPTDTPEQQARVAKMQQMTPAKIAPLAGYLASDASAEVSGQIFAVRNNEIFLMSQPRP 264 Query: 181 VRSVHRSEGWTPESIAEHGMPALAGSFFPLDRSGDIFTWDPV 222 RSV RSEGWT ESIAEH MPAL S +PLDRSGD+FTWDPV Sbjct: 265 ARSVQRSEGWTIESIAEHAMPALKASLYPLDRSGDVFTWDPV 306 >ref|YP_002943222.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS17956.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 301 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 177/222 (79%), Positives = 201/222 (90%) Query: 1 LFEQAIAAFGRVDGVVNNAGILRDRIFHKMSEEEWDAVLKVHLYGAYYMSRACAAHFKEQ 60 + E A+ +FGR+D VVNNAGILRDR FHKMS +EWDAVLKVHLYGAYY+SRA A HFKEQ Sbjct: 80 IVECAVESFGRIDAVVNNAGILRDRFFHKMSVDEWDAVLKVHLYGAYYVSRAAATHFKEQ 139 Query: 61 NSGSMVHMTSTSGLIGNFGQANYSAAKLGVTALSKSIALDMQKFNVRSNCIAPFAWSRMV 120 NSG+MVHMTSTSGLIGN+GQANY+AAKLG+ ALSKSIALDM KFNVRSNCIAPFAWSRM+ Sbjct: 140 NSGAMVHMTSTSGLIGNYGQANYAAAKLGIVALSKSIALDMLKFNVRSNCIAPFAWSRMI 199 Query: 121 SSVPTDTPEQQARVDKIKQMTPAKIAPLAVYLASERAAQVNGQVFTVRNNEIFLMSQPRP 180 ++PTDT EQ+ARVDKIKQMTPAK+APLAVYLAS+ A VNGQ+F+VRNNEI L+SQPRP Sbjct: 200 GAIPTDTDEQRARVDKIKQMTPAKVAPLAVYLASDAAGAVNGQIFSVRNNEISLISQPRP 259 Query: 181 VRSVHRSEGWTPESIAEHGMPALAGSFFPLDRSGDIFTWDPV 222 VRS+HRSEGWTP+SIAEH MPA+ SF PLDRS D+F+WDPV Sbjct: 260 VRSIHRSEGWTPQSIAEHAMPAMRASFHPLDRSADVFSWDPV 301 >ref|YP_984451.1| short-chain dehydrogenase/reductase SDR [Acidovorax sp. JS42] gb|ABM40375.1| short-chain dehydrogenase/reductase SDR [Acidovorax sp. JS42] Length = 305 Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust. Identities = 180/222 (81%), Positives = 199/222 (89%) Query: 1 LFEQAIAAFGRVDGVVNNAGILRDRIFHKMSEEEWDAVLKVHLYGAYYMSRACAAHFKEQ 60 + + A+ FGR+DGVVNNAGILRDR FHKMS +EWDAVLKVHLYG+YYMSRA A HFKEQ Sbjct: 84 IIQCALDHFGRIDGVVNNAGILRDRFFHKMSLDEWDAVLKVHLYGSYYMSRAAANHFKEQ 143 Query: 61 NSGSMVHMTSTSGLIGNFGQANYSAAKLGVTALSKSIALDMQKFNVRSNCIAPFAWSRMV 120 SG+ VHMTSTSGLIGNFGQANYSAAKLG+ ALSKSIALDMQKF+VRSNCIAPFAWSRM+ Sbjct: 144 ESGAFVHMTSTSGLIGNFGQANYSAAKLGLVALSKSIALDMQKFHVRSNCIAPFAWSRMI 203 Query: 121 SSVPTDTPEQQARVDKIKQMTPAKIAPLAVYLASERAAQVNGQVFTVRNNEIFLMSQPRP 180 S+PTDTPEQQARV KI+QMTP KIAPLAVYL S++A VN QVF VRNNEIFLMSQPRP Sbjct: 204 GSIPTDTPEQQARVAKIQQMTPNKIAPLAVYLLSDQAQDVNAQVFAVRNNEIFLMSQPRP 263 Query: 181 VRSVHRSEGWTPESIAEHGMPALAGSFFPLDRSGDIFTWDPV 222 +RSVHRSEGWTPE IAEHGMPAL SF P++RSGD+F+WDPV Sbjct: 264 LRSVHRSEGWTPEFIAEHGMPALKASFVPMERSGDVFSWDPV 305 >ref|YP_004124837.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC] ref|YP_004386107.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gb|ADU97949.1| short-chain dehydrogenase/reductase SDR [Alicycliphilus denitrificans BC] gb|AEB82591.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 305 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/222 (81%), Positives = 198/222 (89%) Query: 1 LFEQAIAAFGRVDGVVNNAGILRDRIFHKMSEEEWDAVLKVHLYGAYYMSRACAAHFKEQ 60 + + A+ FGR+DGVVNNAGILRDR FHKMS +EWDAV+KVHLYG+YYM+RA A HFKEQ Sbjct: 84 IVQCALDHFGRIDGVVNNAGILRDRFFHKMSLDEWDAVVKVHLYGSYYMARAAANHFKEQ 143 Query: 61 NSGSMVHMTSTSGLIGNFGQANYSAAKLGVTALSKSIALDMQKFNVRSNCIAPFAWSRMV 120 SG+ VHMTSTSGLIGNFGQANYSAAKLG+ ALSKSIALDMQKFNVRSNCIAPFAWSRM+ Sbjct: 144 ESGAFVHMTSTSGLIGNFGQANYSAAKLGLVALSKSIALDMQKFNVRSNCIAPFAWSRMI 203 Query: 121 SSVPTDTPEQQARVDKIKQMTPAKIAPLAVYLASERAAQVNGQVFTVRNNEIFLMSQPRP 180 S+PTDTPEQQARV KI+QMTP KIAPLAVYL S+ A VN QVF VRNNEIFLMSQPRP Sbjct: 204 GSIPTDTPEQQARVAKIQQMTPNKIAPLAVYLLSDAAKDVNAQVFAVRNNEIFLMSQPRP 263 Query: 181 VRSVHRSEGWTPESIAEHGMPALAGSFFPLDRSGDIFTWDPV 222 VRSVHRSEGWTPE IAEHGMPAL SF P++RSGD+F+WDPV Sbjct: 264 VRSVHRSEGWTPEFIAEHGMPALKSSFVPMERSGDVFSWDPV 305