BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0006.p         (92 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003976950.1| short chain dehydrogenase family protein 15 ...    96   2e-18
ref|ZP_06845973.1| short-chain dehydrogenase/reductase SDR [Burk...    96   2e-18
ref|YP_004124827.1| short-chain dehydrogenase/reductase sdr [Ali...    94   7e-18
ref|NP_773012.1| short-chain dehydrogenase [Bradyrhizobium japon...    94   1e-17
ref|YP_552038.1| short-chain dehydrogenase/reductase SDR [Polaro...    92   4e-17

>ref|YP_003976950.1| short chain dehydrogenase family protein 15 [Achromobacter
          xylosoxidans A8]
 gb|ADP14235.1| short chain dehydrogenase family protein 15 [Achromobacter
          xylosoxidans A8]
          Length = 304

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 58/73 (79%)

Query: 1  MLEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAG 60
          M+ GKV+ VTGAGGGIGR IALAMAQ GA +V+NDIG SL+GEG   GPAQ VV EI A 
Sbjct: 4  MVSGKVVIVTGAGGGIGRSIALAMAQAGAKVVVNDIGVSLTGEGGAEGPAQAVVKEIIAA 63

Query: 61 GGNAVANTSSVAS 73
          GG AVANT SVA+
Sbjct: 64 GGQAVANTDSVAA 76


>ref|ZP_06845973.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1]
 gb|EFG66405.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1]
          Length = 306

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 1  MLEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAG 60
          +L+GK I VTGAGGGIGR+IAL MA+ GA +V+ND+GASL+G+ +D G AQRVVDEI A 
Sbjct: 6  LLDGKSIIVTGAGGGIGREIALLMARYGASVVVNDLGASLAGDASDKGAAQRVVDEITAA 65

Query: 61 GGNAVANTSSVA 72
          GG AVAN SSVA
Sbjct: 66 GGKAVANQSSVA 77


>ref|YP_004124827.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus
          denitrificans BC]
 ref|YP_004386097.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans
          K601]
 gb|ADU97939.1| short-chain dehydrogenase/reductase SDR [Alicycliphilus
          denitrificans BC]
 gb|AEB82581.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans
          K601]
          Length = 307

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 2  LEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAGG 61
          ++GKV+ VTGAG GIGR  AL +A QGA +V+ND+GAS SGEG+DAGPAQ+VVDEI A G
Sbjct: 8  MDGKVVVVTGAGNGIGRATALLLAGQGASVVVNDLGASGSGEGSDAGPAQKVVDEITAAG 67

Query: 62 GNAVANTSSVAS 73
          G AVANT SVA+
Sbjct: 68 GVAVANTDSVAT 79


>ref|NP_773012.1| short-chain dehydrogenase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51637.1| bll6372 [Bradyrhizobium japonicum USDA 110]
          Length = 306

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 57/73 (78%)

Query: 2  LEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAGG 61
          L+GKV+ VTGAGGGIG  IAL M  +GA +V+NDIGAS+SGEG D GPAQ V  EI+A G
Sbjct: 7  LDGKVVIVTGAGGGIGHSIALLMGARGAKVVVNDIGASVSGEGADVGPAQSVATEIRAAG 66

Query: 62 GNAVANTSSVASA 74
          G AVANT SVA A
Sbjct: 67 GEAVANTDSVAEA 79


>ref|YP_552038.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666]
 gb|ABE47140.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666]
          Length = 306

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 58/73 (79%)

Query: 1  MLEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAG 60
          ML+ KV  VTGAG GIGRDIAL MA QGA +V+NDIGAS+ GEGNDA   Q+VV+EIKA 
Sbjct: 6  MLQDKVAVVTGAGRGIGRDIALMMAAQGAKVVVNDIGASVGGEGNDASHGQQVVNEIKAT 65

Query: 61 GGNAVANTSSVAS 73
          GG AV +T SV++
Sbjct: 66 GGQAVLSTDSVST 78