BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0003.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06845772.1| conserved hypothetical protein [Burkholderia ... 221 8e-56 ref|YP_003608769.1| hypothetical protein BC1002_5321 [Burkholder... 216 2e-54 ref|YP_004156154.1| hypothetical protein Varpa_3862 [Variovorax ... 216 3e-54 ref|ZP_03268646.1| conserved hypothetical protein [Burkholderia ... 216 3e-54 ref|ZP_06842554.1| conserved hypothetical protein [Burkholderia ... 215 5e-54 >ref|ZP_06845772.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG66582.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 280 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 125/273 (45%), Positives = 163/273 (59%), Gaps = 23/273 (8%) Query: 1 MAATMNIDTSFKEQDPLPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPR 60 +AAT++ + D +PP WHWL+F + P S +G DGHP RG FLPPV LPR Sbjct: 30 LAATLD---RTEANDTVPPLWHWLYFLPVAPMSEVGRDGHPERGG------FLPPVPLPR 80 Query: 61 RMFAGSRLDWRGDLKVGARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLEEQQ 120 RM+AG RL + LK+G R + STI ++E K+G SG +VFVTV+H + LEE+ Sbjct: 81 RMWAGGRLTFHAPLKLGDRATRTSTIANIEDKTGRSGRLVFVTVKHAIEVEGELKLEEEH 140 Query: 121 DIVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAATFNG 180 DIVYRD G R+ +A +GE + + V D V LFRYSA TFNG Sbjct: 141 DIVYRDAPQEGGRQPQPAIAP-----EGETWR--------RTVDADAVLLFRYSALTFNG 187 Query: 181 HRIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFDIGP 240 HRIHYD+PYAT VE YPGL+VHGPL+AT+LV+ + RE PG LQ F FRA PTF P Sbjct: 188 HRIHYDYPYATDVEGYPGLIVHGPLIATLLVDLVRRE-QPGATLQSFAFRALHPTFADQP 246 Query: 241 FHLHAGAGDENGRIELWSTNNVGEVAVHGWAVC 273 F + + I+LW+ ++ G + + AV Sbjct: 247 FTVCGRPSADGKTIDLWAKDHEGYLTMRATAVL 279 >ref|YP_003608769.1| hypothetical protein BC1002_5321 [Burkholderia sp. CCGE1002] gb|ADG19258.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 280 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/273 (45%), Positives = 160/273 (58%), Gaps = 23/273 (8%) Query: 1 MAATMNIDTSFKEQDPLPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPR 60 +AAT++ + S + +PP WHWL+F + P S +G DGHP RG FLPPV LPR Sbjct: 30 LAATLDREES---GNTVPPLWHWLYFLPVAPLSEVGPDGHPKRGG------FLPPVPLPR 80 Query: 61 RMFAGSRLDWRGDLKVGARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLEEQQ 120 RM+AG RL + LK+G + STI ++E K+G SG +VFVTV+H D LEE+ Sbjct: 81 RMWAGGRLTFHAPLKIGEHARRTSTIANIEDKTGRSGRLVFVTVQHTIEVDGELKLEEEH 140 Query: 121 DIVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAATFNG 180 DIVYRD G R A +GE + + + D V LFRYSA TFNG Sbjct: 141 DIVYRDAPQQGARPQQPAPAP-----EGETWR--------RTIDADAVMLFRYSALTFNG 187 Query: 181 HRIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFDIGP 240 HRIHYDHPY T VE YPGLVVHGPL+AT+LV+ + RE+ P LQ F FRA RPTF P Sbjct: 188 HRIHYDHPYVTQVEGYPGLVVHGPLIATLLVDLVRREL-PQATLQGFAFRALRPTFADQP 246 Query: 241 FHLHAGAGDENGRIELWSTNNVGEVAVHGWAVC 273 F + + I+LW+ ++ G + + A Sbjct: 247 FTVCGKPAADGKTIDLWAKDHEGYLTMRATAAL 279 >ref|YP_004156154.1| hypothetical protein Varpa_3862 [Variovorax paradoxus EPS] gb|ADU38043.1| hypothetical protein Varpa_3862 [Variovorax paradoxus EPS] Length = 299 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 128/279 (45%), Positives = 161/279 (57%), Gaps = 26/279 (9%) Query: 1 MAATMNIDTSFKEQDP-LPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLP 59 ++AT++ D + E LP WHWL+F QS +GEDGH RG FLPPV LP Sbjct: 40 LSATLDRDDAPPEAGTHLPALWHWLYFLPHHRQSEIGEDGH------AKRGGFLPPVPLP 93 Query: 60 RRMFAGSRLDWRGD--LKVGARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLE 117 RRM+AG RL+W L+VG ++E+ STI SV K+G +G++VFV VRH R L Sbjct: 94 RRMWAGGRLNWEASNPLQVGDKVERTSTIASVTHKAGRTGELVFVLVRHEVRNARGLALT 153 Query: 118 EQQDIVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAAT 177 E+ DIVYR ++ GE+ A K A ++ + PD V LFRYSA T Sbjct: 154 EEHDIVYRAAAAPGEKTPPPTPAS-------------KDAAFSREIVPDDVLLFRYSALT 200 Query: 178 FNGHRIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFD 237 FNGHRIHYD Y T VE YPGL+VHGPL+AT+LV+ L R V PG L FEFRA RPTFD Sbjct: 201 FNGHRIHYDRRYVTEVEGYPGLIVHGPLIATLLVDLLRRNV-PGAQLARFEFRAVRPTFD 259 Query: 238 IGPFHLHAG---AGDENGRIELWSTNNVGEVAVHGWAVC 273 I PF +H +N LW + G + + AV Sbjct: 260 IAPFRVHGKPTEGSSDNKTFSLWGEDADGWLTMRATAVL 298 >ref|ZP_03268646.1| conserved hypothetical protein [Burkholderia sp. H160] gb|EDZ99753.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 280 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 125/273 (45%), Positives = 162/273 (59%), Gaps = 23/273 (8%) Query: 1 MAATMNIDTSFKEQDPLPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPR 60 +AAT++ + S + +PP WHWL+F + P S +G DGHP RG FLPPV LPR Sbjct: 30 LAATLDREES---GNTVPPLWHWLYFLPVAPLSEVGPDGHPKRGG------FLPPVPLPR 80 Query: 61 RMFAGSRLDWRGDLKVGARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLEEQQ 120 RM+AG RL + LK+G R ++ STI ++E K+G SG +VFVTV+H D LEE+ Sbjct: 81 RMWAGGRLTFHAPLKIGERAQRTSTIANIEDKTGRSGRLVFVTVQHTIEVDGELKLEEEH 140 Query: 121 DIVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAATFNG 180 DIVYRD R A +GE + +RT + D V LFRYSA TFNG Sbjct: 141 DIVYRDAPQESARPQRPAPAP-----EGETW------QRT--IVADAVMLFRYSALTFNG 187 Query: 181 HRIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFDIGP 240 HRIHYDHPY T VE YPGLVVHGPL+AT+LV+ + RE+ P LQ F FRA RP F P Sbjct: 188 HRIHYDHPYVTQVEGYPGLVVHGPLIATLLVDLVRREL-PHATLQSFAFRALRPIFADQP 246 Query: 241 FHLHAGAGDENGRIELWSTNNVGEVAVHGWAVC 273 F + + I+LW+ ++ G + + A Sbjct: 247 FTVCGKPAADGKTIDLWAKDHEGYLTMRATAAL 279 >ref|ZP_06842554.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG69742.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 280 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 125/273 (45%), Positives = 159/273 (58%), Gaps = 23/273 (8%) Query: 1 MAATMNIDTSFKEQDPLPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPR 60 MAAT++ + + +PP WHWL+F I P S +G DGHP RG FLPPV LPR Sbjct: 30 MAATLDRE---ENGGTVPPLWHWLYFLPIAPMSEVGPDGHPKRGG------FLPPVPLPR 80 Query: 61 RMFAGSRLDWRGDLKVGARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLEEQQ 120 RM+AG RL + LKVG R + STI ++E K+G SG +VFVTV+H LEE+ Sbjct: 81 RMWAGGRLTFHAPLKVGERATRTSTIANIEDKTGRSGRLVFVTVQHTIEAGGELKLEEEH 140 Query: 121 DIVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAATFNG 180 DIVYRD G R LA +GE + + + P PV LFRYSA TFNG Sbjct: 141 DIVYRDAPHEGARPPQPQLAP-----EGEVWR--------RTIDPAPVMLFRYSALTFNG 187 Query: 181 HRIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFDIGP 240 HRIHYD+PY T VE YPGLVVHGPL+AT+LV+ + RE P LQ F F+A RPTF Sbjct: 188 HRIHYDYPYVTQVEGYPGLVVHGPLIATLLVDLVRRE-QPDATLQSFAFKAVRPTFAGQA 246 Query: 241 FHLHAGAGDENGRIELWSTNNVGEVAVHGWAVC 273 F + + I+LW+ ++ G + + A Sbjct: 247 FTVCGKPSADGKVIDLWAKDHEGYLTMRATAAL 279