BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0006.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08273273.1| Penicillin-binding protein 2 (PBP-2) [Oxaloba...   126   1e-27
ref|YP_004754762.1| putative Penicillin-binding protein 2 (PBP-2...   115   2e-24
ref|YP_996383.1| peptidoglycan glycosyltransferase [Verminephrob...   110   6e-23
ref|ZP_04577165.1| penicillin-binding protein 2 [Oxalobacter for...   110   7e-23
ref|YP_001351889.1| penicillin-binding protein 2 [Janthinobacter...   109   1e-22

>ref|ZP_08273273.1| Penicillin-binding protein 2 (PBP-2) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33258.1| Penicillin-binding protein 2 (PBP-2) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 648

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 77/95 (81%), Gaps = 3/95 (3%)

Query: 8   RVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIV 67
           RVF  AEY SAGK+GTAQV++IKKNEKYDAK++     D++L++AFAPADKPRIA+++IV
Sbjct: 533 RVFGKAEYVSAGKTGTAQVIAIKKNEKYDAKKIDELHHDHSLYSAFAPADKPRIAIAIIV 592

Query: 68  EX---GAEAAAPLARKAIDFYLLGKRPGDKAKAAA 99
           E    GAE AAP+ +KA+DFYLLGKRPGDK   A 
Sbjct: 593 ENGGFGAETAAPIVKKALDFYLLGKRPGDKETPAV 627


>ref|YP_004754762.1| putative Penicillin-binding protein 2 (PBP-2) (MrdA) [Collimonas
           fungivorans Ter331]
 gb|AEK63939.1| Putative Penicillin-binding protein 2 (PBP-2) (MrdA) [Collimonas
           fungivorans Ter331]
          Length = 669

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 3/91 (3%)

Query: 9   VFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIVE 68
           +FAGA Y S GK+GTAQV+ IK+ EKYD +   T L DNA +TAFAPADKPRIA++VIVE
Sbjct: 532 IFAGAGYESGGKTGTAQVLGIKQGEKYDKRHNNTRLADNAWYTAFAPADKPRIAIAVIVE 591

Query: 69  XGA---EAAAPLARKAIDFYLLGKRPGDKAK 96
            G     AAAP+ RKA+DFY+LGKRPGD  K
Sbjct: 592 NGGFGAAAAAPIVRKALDFYMLGKRPGDSGK 622


>ref|YP_996383.1| peptidoglycan glycosyltransferase [Verminephrobacter eiseniae
           EF01-2]
 gb|ABM57365.1| peptidoglycan glycosyltransferase [Verminephrobacter eiseniae
           EF01-2]
          Length = 650

 Score =  110 bits (276), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 76/104 (73%), Gaps = 3/104 (2%)

Query: 7   ARVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVI 66
           ARVFAGA YTSAGK+GTAQ VS+  N KY+AK LA HL D+ALFTAFAPA+ P IAL++I
Sbjct: 528 ARVFAGAAYTSAGKTGTAQAVSLGPNVKYNAKALAEHLRDHALFTAFAPAEAPSIALALI 587

Query: 67  VEX---GAEAAAPLARKAIDFYLLGKRPGDKAKAAAKDAEAATP 107
           VE    G+  AAP+AR+  D++L+G+ P ++  AA +   A  P
Sbjct: 588 VENAGFGSAHAAPIARRVFDYWLMGEYPSEEDIAAVQKGLAGAP 631


>ref|ZP_04577165.1| penicillin-binding protein 2 [Oxalobacter formigenes HOxBLS]
 gb|EEO28127.1| penicillin-binding protein 2 [Oxalobacter formigenes HOxBLS]
          Length = 656

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 70/96 (72%), Gaps = 3/96 (3%)

Query: 7   ARVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVI 66
           ARVF GA Y S GK+GTAQV+ I KNEKY+A  LA H  D+AL+TAFAP D P+I +++I
Sbjct: 528 ARVFGGAGYVSGGKTGTAQVIGIGKNEKYNAAALAEHKRDHALYTAFAPVDNPKIVIALI 587

Query: 67  VEX---GAEAAAPLARKAIDFYLLGKRPGDKAKAAA 99
           VE    GA AAAP+A+KA+D++ LGKRP  +    A
Sbjct: 588 VENAGFGASAAAPIAKKAMDYFFLGKRPATEVTGHA 623


>ref|YP_001351889.1| penicillin-binding protein 2 [Janthinobacterium sp. Marseille]
 gb|ABR89646.1| penicillin-binding protein 2 [Janthinobacterium sp. Marseille]
          Length = 637

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 80/97 (82%), Gaps = 3/97 (3%)

Query: 7   ARVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVI 66
           AR FA AEY SAGK+GTAQV++IKKNEKYDA +++    D+AL+TAFAPAD PRIAL++I
Sbjct: 530 ARAFARAEYVSAGKTGTAQVIAIKKNEKYDASKISDRHHDHALYTAFAPADNPRIALAII 589

Query: 67  VEX---GAEAAAPLARKAIDFYLLGKRPGDKAKAAAK 100
           VE    G  AAAP+A++A+DFYLLGKRP DKA+A AK
Sbjct: 590 VENGGFGGAAAAPIAKQAMDFYLLGKRPEDKAQAPAK 626