BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0005.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001351889.1| penicillin-binding protein 2 [Janthinobacter... 569 e-160 ref|YP_003778039.1| cell division protein FtsI [Herbaspirillum s... 566 e-159 ref|ZP_08273273.1| Penicillin-binding protein 2 (PBP-2) [Oxaloba... 564 e-159 ref|YP_001098535.1| putative penicillin-binding protein 2 (PBP-2... 561 e-158 ref|YP_004754762.1| putative Penicillin-binding protein 2 (PBP-2... 516 e-144 >ref|YP_001351889.1| penicillin-binding protein 2 [Janthinobacterium sp. Marseille] gb|ABR89646.1| penicillin-binding protein 2 [Janthinobacterium sp. Marseille] Length = 637 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 263/315 (83%), Positives = 288/315 (91%) Query: 3 SAGGRAVRTLSRTPASPGQNLILSIDIELQKVIEEAFGDRKGALVAIDPATGDILAYVSQ 62 SAGGR +RTLSRT A+PG NLILSIDIELQKV+E+AFGDR+GAL+AI+P+TGD+LAYVS Sbjct: 228 SAGGRPIRTLSRTAATPGDNLILSIDIELQKVVEQAFGDRRGALIAIEPSTGDVLAYVSM 287 Query: 63 PSFDPNVFVEGIDQQTWDELNNSPDRPLINRPLSGTYPPGSTYKPFMALAALELGKRKPT 122 P+FDPN+FVEGIDQQ WD LNNSPD PL+NRPLSG YPPGSTYKPFMALAALELGKRKP+ Sbjct: 288 PTFDPNLFVEGIDQQNWDALNNSPDHPLLNRPLSGAYPPGSTYKPFMALAALELGKRKPS 347 Query: 123 DSIRDPGFFWLGNHKFRDDKEGGHGVVDMYRSIVVSCDTYYYMLANDLGVDAIHDFMKPF 182 D+I DPG+FW GNHKFRDDKEGGHG VDMY+SIV SCDTYYYMLANDLGVDAIHDFMKPF Sbjct: 348 DAISDPGYFWFGNHKFRDDKEGGHGFVDMYKSIVQSCDTYYYMLANDLGVDAIHDFMKPF 407 Query: 183 GFGQVTGIDLEHERKGLLPSTTWKRNAYRKPEQRKWYAGETISLGIGQGYNAFTPIQMAH 242 GFGQ TGIDL ER G+LPST WK AYRKPEQ+KWYAGETIS+GIGQGYN+FTP+Q+AH Sbjct: 408 GFGQKTGIDLRFERTGVLPSTAWKAAAYRKPEQKKWYAGETISIGIGQGYNSFTPLQLAH 467 Query: 243 ATATLANNGIVMKPHLVKMIEDGVTHGRTVTVPKESYRIPLKQENIDVIKQAMVGVNKEG 302 ATA LANNG+VMKPHLVKMIE+G T RT+TVPKESYRIPLKQENIDVIK AMVGVNKEG Sbjct: 468 ATAVLANNGVVMKPHLVKMIENGTTRQRTLTVPKESYRIPLKQENIDVIKNAMVGVNKEG 527 Query: 303 TGARVFAGAEYTSAG 317 TGAR FA AEY SAG Sbjct: 528 TGARAFARAEYVSAG 542 >ref|YP_003778039.1| cell division protein FtsI [Herbaspirillum seropedicae SmR1] gb|ADJ66131.1| cell division protein FtsI (peptidoglycan synthetase) protein [Herbaspirillum seropedicae SmR1] Length = 656 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 260/315 (82%), Positives = 294/315 (93%) Query: 3 SAGGRAVRTLSRTPASPGQNLILSIDIELQKVIEEAFGDRKGALVAIDPATGDILAYVSQ 62 SA GRAVR+LSRTPA+PG+NLILSIDIELQKV+EEAFGD+KGALVAI+PATGDILAYVSQ Sbjct: 228 SASGRAVRSLSRTPATPGKNLILSIDIELQKVVEEAFGDQKGALVAINPATGDILAYVSQ 287 Query: 63 PSFDPNVFVEGIDQQTWDELNNSPDRPLINRPLSGTYPPGSTYKPFMALAALELGKRKPT 122 PS+DPN+FVEGIDQQ+WDELN SPDRPL+NRPLSG Y PGSTYKPFMALAALELGKR+P Sbjct: 288 PSYDPNLFVEGIDQQSWDELNKSPDRPLLNRPLSGLYSPGSTYKPFMALAALELGKRRPQ 347 Query: 123 DSIRDPGFFWLGNHKFRDDKEGGHGVVDMYRSIVVSCDTYYYMLANDLGVDAIHDFMKPF 182 D+IRDPG+F LGNH+FRDDKEGGHGVVDMYRS+VVSCDTYYYMLAND+GV+AIHDFMKPF Sbjct: 348 DAIRDPGYFILGNHRFRDDKEGGHGVVDMYRSVVVSCDTYYYMLANDMGVNAIHDFMKPF 407 Query: 183 GFGQVTGIDLEHERKGLLPSTTWKRNAYRKPEQRKWYAGETISLGIGQGYNAFTPIQMAH 242 GFGQ+TGIDLEHE++G+LPST WKR A+RKPEQ++W AG+T+SLGIGQGYN+FTP+Q+A Sbjct: 408 GFGQITGIDLEHEKRGILPSTEWKRTAFRKPEQKRWIAGDTVSLGIGQGYNSFTPLQLAQ 467 Query: 243 ATATLANNGIVMKPHLVKMIEDGVTHGRTVTVPKESYRIPLKQENIDVIKQAMVGVNKEG 302 ATA LANNG+VMKPHLVK++EDGVTH RT TVPKESYRIP+KQENID IK+AMVGV KEG Sbjct: 468 ATAILANNGVVMKPHLVKIVEDGVTHERTETVPKESYRIPMKQENIDFIKRAMVGVVKEG 527 Query: 303 TGARVFAGAEYTSAG 317 TGA F GA Y S G Sbjct: 528 TGAAAFRGAPYESGG 542 >ref|ZP_08273273.1| Penicillin-binding protein 2 (PBP-2) [Oxalobacteraceae bacterium IMCC9480] gb|EGF33258.1| Penicillin-binding protein 2 (PBP-2) [Oxalobacteraceae bacterium IMCC9480] Length = 648 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 264/317 (83%), Positives = 291/317 (91%), Gaps = 2/317 (0%) Query: 3 SAGGRAVRTLSRTPASPGQNLILSIDIELQKVIEEAFGDRKGALVAIDPATGDILAYVSQ 62 SAGGRAVRTLSRTPASPG NLILSIDIELQKV+EEAFGD +GALVAI+P+TGDILAYVS Sbjct: 228 SAGGRAVRTLSRTPASPGNNLILSIDIELQKVVEEAFGDHRGALVAIEPSTGDILAYVSM 287 Query: 63 PSFDPNVFVEGIDQQTWDELNNSPDRPLINRPLSGTYPPGSTYKPFMALAALELGKRKPT 122 P+FDPN+FVEGIDQQ+W++LN S +RPL+NRPLSGTYPPGSTYKPFMALAALELGKRKP Sbjct: 288 PTFDPNLFVEGIDQQSWEQLNTSLERPLLNRPLSGTYPPGSTYKPFMALAALELGKRKPE 347 Query: 123 DSIRDPGFFWLGNHKFRDDKEGGHGVVDMYRSIVVSCDTYYYMLANDLGVDAIHDFMKPF 182 D+I DPGFF LGNH+FRDDKEGGHG+VDM RSIV SCDTYYY+LANDLGVDAIHDFMKPF Sbjct: 348 DTISDPGFFVLGNHRFRDDKEGGHGMVDMRRSIVASCDTYYYLLANDLGVDAIHDFMKPF 407 Query: 183 GFGQVTGIDLEHERKGLLPSTTWKRNAYRKPEQRKWYAGETISLGIGQGYNAFTPIQMAH 242 GFG++TGIDLEHERKGLLPST+WKR AYRK EQ+KWYAGETISLGIGQGYN+FTP+QMAH Sbjct: 408 GFGELTGIDLEHERKGLLPSTSWKRTAYRKREQQKWYAGETISLGIGQGYNSFTPLQMAH 467 Query: 243 ATATLANNGIVMKPHLVKMIEDGVTHGRTVTVPKESYRIPLKQENIDVIKQAMVGVNKE- 301 A ATLANNG+VMKPHLVK+IE+G+T RTVTVPKESYRIPLKQ NID++K AMVGV E Sbjct: 468 AIATLANNGVVMKPHLVKIIENGITRERTVTVPKESYRIPLKQANIDIVKNAMVGVTSEA 527 Query: 302 -GTGARVFAGAEYTSAG 317 GT RVF AEY SAG Sbjct: 528 GGTSYRVFGKAEYVSAG 544 >ref|YP_001098535.1| putative penicillin-binding protein 2 (PBP-2) (MrdA) [Herminiimonas arsenicoxydans] emb|CAL60406.1| Putative Penicillin-binding protein 2 (PBP-2) (MrdA) [Herminiimonas arsenicoxydans] Length = 635 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 257/315 (81%), Positives = 288/315 (91%) Query: 3 SAGGRAVRTLSRTPASPGQNLILSIDIELQKVIEEAFGDRKGALVAIDPATGDILAYVSQ 62 SAGGR +RTLSRT A+PG NLILSIDIELQKV+E+AFG+R+GAL+AI+P+TGD+LAYVS Sbjct: 228 SAGGRPIRTLSRTAATPGDNLILSIDIELQKVVEQAFGNRRGALIAIEPSTGDVLAYVSM 287 Query: 63 PSFDPNVFVEGIDQQTWDELNNSPDRPLINRPLSGTYPPGSTYKPFMALAALELGKRKPT 122 P+FDPN+FVEGIDQQ WD LNNSPD PL+NRPLSG YPPGSTYKPFMALAALELGKRKP+ Sbjct: 288 PTFDPNLFVEGIDQQNWDALNNSPDHPLLNRPLSGAYPPGSTYKPFMALAALELGKRKPS 347 Query: 123 DSIRDPGFFWLGNHKFRDDKEGGHGVVDMYRSIVVSCDTYYYMLANDLGVDAIHDFMKPF 182 D+I DPG+FW GNHKFRDDKEGGHG+VDMY+SIV SCDTYYY+LANDLGVDAIHDFMKPF Sbjct: 348 DAIADPGYFWFGNHKFRDDKEGGHGMVDMYKSIVQSCDTYYYLLANDLGVDAIHDFMKPF 407 Query: 183 GFGQVTGIDLEHERKGLLPSTTWKRNAYRKPEQRKWYAGETISLGIGQGYNAFTPIQMAH 242 GFGQ TGIDL ER G+LPST WK AY+KPEQ++WYAGETIS+GIGQGYN FTP+Q+AH Sbjct: 408 GFGQKTGIDLRFERTGVLPSTAWKAAAYKKPEQKRWYAGETISIGIGQGYNTFTPLQLAH 467 Query: 243 ATATLANNGIVMKPHLVKMIEDGVTHGRTVTVPKESYRIPLKQENIDVIKQAMVGVNKEG 302 ATATLANNG+VMKPHLV+ IE+GVT RT+TVPKESYRIPLKQENID+IK AMVGVNKEG Sbjct: 468 ATATLANNGVVMKPHLVREIENGVTRQRTLTVPKESYRIPLKQENIDIIKHAMVGVNKEG 527 Query: 303 TGARVFAGAEYTSAG 317 TGAR FA AEY S G Sbjct: 528 TGARAFARAEYVSGG 542 >ref|YP_004754762.1| putative Penicillin-binding protein 2 (PBP-2) (MrdA) [Collimonas fungivorans Ter331] gb|AEK63939.1| Putative Penicillin-binding protein 2 (PBP-2) (MrdA) [Collimonas fungivorans Ter331] Length = 669 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 242/315 (76%), Positives = 273/315 (86%) Query: 3 SAGGRAVRTLSRTPASPGQNLILSIDIELQKVIEEAFGDRKGALVAIDPATGDILAYVSQ 62 +A GRAVR++S A+PG NLILSIDIELQKV EEAFGDR+GALVAI+P+TGD+LAYVSQ Sbjct: 228 AASGRAVRSMSHVSATPGNNLILSIDIELQKVAEEAFGDRRGALVAIEPSTGDVLAYVSQ 287 Query: 63 PSFDPNVFVEGIDQQTWDELNNSPDRPLINRPLSGTYPPGSTYKPFMALAALELGKRKPT 122 PSFDPN+FVEGIDQQ+WDELNNSPD PLINRP+SGTY PGSTYKPFMALAALELGKR + Sbjct: 288 PSFDPNLFVEGIDQQSWDELNNSPDHPLINRPMSGTYAPGSTYKPFMALAALELGKRTTS 347 Query: 123 DSIRDPGFFWLGNHKFRDDKEGGHGVVDMYRSIVVSCDTYYYMLANDLGVDAIHDFMKPF 182 +I D G+F LG H+FRDDK GGHG VDMY+SIV SCDTYYYMLANDLG D IHDFMKPF Sbjct: 348 FAINDIGYFMLGGHQFRDDKVGGHGRVDMYKSIVESCDTYYYMLANDLGPDTIHDFMKPF 407 Query: 183 GFGQVTGIDLEHERKGLLPSTTWKRNAYRKPEQRKWYAGETISLGIGQGYNAFTPIQMAH 242 GFGQ+TGIDLEHE++G+LPST WKR Y++ +KW G+TISLGIGQG+NAFTP+QMAH Sbjct: 408 GFGQLTGIDLEHEQRGILPSTDWKRKYYKRVAAQKWVGGDTISLGIGQGFNAFTPLQMAH 467 Query: 243 ATATLANNGIVMKPHLVKMIEDGVTHGRTVTVPKESYRIPLKQENIDVIKQAMVGVNKEG 302 A ATL N+G+VMKPHLVK+IEDG T RT TVPKESYRIPLKQENID IK+AMVGV EG Sbjct: 468 AVATLVNDGVVMKPHLVKIIEDGATRTRTQTVPKESYRIPLKQENIDFIKKAMVGVTHEG 527 Query: 303 TGARVFAGAEYTSAG 317 TG +FAGA Y S G Sbjct: 528 TGRAIFAGAGYESGG 542