BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0134.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN58875.1| D-xylose 1-dehydrogenase [uncultured bacterium BL...   149   2e-34
ref|YP_003777871.1| short-chain dehydrogenase [Herbaspirillum se...   144   3e-33
ref|YP_556561.1| D-xylose dehydrogenase [Burkholderia xenovorans...   144   4e-33
ref|YP_003609678.1| short-chain dehydrogenase/reductase SDR [Bur...   141   4e-32
ref|ZP_03268311.1| short-chain dehydrogenase/reductase SDR [Burk...   140   7e-32

>gb|ACN58875.1| D-xylose 1-dehydrogenase [uncultured bacterium BLR13]
          Length = 288

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 73/83 (87%)

Query: 45  GLARDLGVHGIRVNCIIPGAVRTPRQMRLWHSPEEEAKILASQCLHTRVDPHDVAALALF 104
           GLARDLG  GIRVNCIIPG+VRTPRQM LWH+PE E  IL +QCLH RV+P DVAA+ALF
Sbjct: 206 GLARDLGADGIRVNCIIPGSVRTPRQMALWHTPEGEQDILNAQCLHERVEPEDVAAMALF 265

Query: 105 LASDSASKCSGRDYFVDAGWYGA 127
           LASD+A +CSGRDYFVDAGWYGA
Sbjct: 266 LASDNAGRCSGRDYFVDAGWYGA 288


>ref|YP_003777871.1| short-chain dehydrogenase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65963.1| short-chain dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 263

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/83 (77%), Positives = 74/83 (89%)

Query: 45  GLARDLGVHGIRVNCIIPGAVRTPRQMRLWHSPEEEAKILASQCLHTRVDPHDVAALALF 104
           G+ARD G  G+RVN IIPGA+RTPRQ  LWH+PEEEAKILA+QCL TRVDPHDVAALALF
Sbjct: 181 GMARDFGRDGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALF 240

Query: 105 LASDSASKCSGRDYFVDAGWYGA 127
           L+SDS +KC+GR+Y+VDAGW GA
Sbjct: 241 LSSDSGAKCTGREYYVDAGWLGA 263


>ref|YP_556561.1| D-xylose dehydrogenase [Burkholderia xenovorans LB400]
 gb|ABE37211.1| D-xylose dehydrogenase [Burkholderia xenovorans LB400]
          Length = 268

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/82 (79%), Positives = 72/82 (87%)

Query: 45  GLARDLGVHGIRVNCIIPGAVRTPRQMRLWHSPEEEAKILASQCLHTRVDPHDVAALALF 104
           GLARDLG  GIRVNCIIPGAVRTPRQM+LW SPE EAK++ASQCL  R++P  VA +ALF
Sbjct: 186 GLARDLGAAGIRVNCIIPGAVRTPRQMQLWQSPESEAKLVASQCLRLRIEPEHVARMALF 245

Query: 105 LASDSASKCSGRDYFVDAGWYG 126
           LASD AS+CSGRDYFVDAGWYG
Sbjct: 246 LASDDASRCSGRDYFVDAGWYG 267


>ref|YP_003609678.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002]
 gb|ADG20167.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002]
          Length = 255

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 71/82 (86%)

Query: 45  GLARDLGVHGIRVNCIIPGAVRTPRQMRLWHSPEEEAKILASQCLHTRVDPHDVAALALF 104
           GLARDLG  GIRVNCIIPGAV+TPRQM+LW S E EAK++ASQCL  R++P  VA +ALF
Sbjct: 173 GLARDLGNAGIRVNCIIPGAVKTPRQMQLWQSAESEAKVVASQCLQLRIEPEHVARMALF 232

Query: 105 LASDSASKCSGRDYFVDAGWYG 126
           LASD AS+CSGRDYFVDAGWYG
Sbjct: 233 LASDDASRCSGRDYFVDAGWYG 254


>ref|ZP_03268311.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160]
 gb|EEA00119.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160]
          Length = 255

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 71/82 (86%)

Query: 45  GLARDLGVHGIRVNCIIPGAVRTPRQMRLWHSPEEEAKILASQCLHTRVDPHDVAALALF 104
           GLARDLG  GIRVNCIIPGAV+TPRQM+LW S E EAK++ASQCL  R++P  VA +ALF
Sbjct: 173 GLARDLGGVGIRVNCIIPGAVKTPRQMQLWQSAESEAKVVASQCLQLRIEPEHVARMALF 232

Query: 105 LASDSASKCSGRDYFVDAGWYG 126
           LASD AS+CSGRDYFVDAGWYG
Sbjct: 233 LASDDASRCSGRDYFVDAGWYG 254