BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0128.p (278 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753801.1| D-xylose transport ATP-binding protein xylG ... 434 e-120 ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspiril... 417 e-115 ref|YP_348033.1| xylose transporter ATP-binding subunit [Pseudom... 396 e-108 ref|ZP_07259935.1| xylose transporter ATP-binding subunit [Pseud... 394 e-108 ref|YP_235957.1| xylose transporter ATP-binding subunit [Pseudom... 394 e-107 >ref|YP_004753801.1| D-xylose transport ATP-binding protein xylG [Collimonas fungivorans Ter331] gb|AEK62978.1| D-xylose transport ATP-binding protein xylG [Collimonas fungivorans Ter331] Length = 528 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 202/239 (84%), Positives = 227/239 (94%) Query: 9 GGHQQLVEIAKALNKKARLLILDEPSSSLTTSEIAVLLKIIKDLKAKGVACVYISHKLDE 68 GGHQQLVEIAKALNK+A+LLILDEPSSSLT SEIAVLL II+DLKAKGVACVYISHKLDE Sbjct: 148 GGHQQLVEIAKALNKQAKLLILDEPSSSLTASEIAVLLDIIRDLKAKGVACVYISHKLDE 207 Query: 69 VAAVCDTISVIRDGKHIATTPMEELDVDRIITQMVGREITAMYPSRDHEVGEIVFEARHM 128 VAAVCDT++VIRDGKHIATTPM++++VDRIITQMVGREI+AMYP ++HE+GE++FEARH+ Sbjct: 208 VAAVCDTVAVIRDGKHIATTPMQDMNVDRIITQMVGREISAMYPDQEHEIGEVMFEARHV 267 Query: 129 TCLDVDNPKRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYPGRCEGEVWMNGA 188 TC D DNP+RKRVDD+SFS+RRGEILGIAGLVGAGRTELVSA+FGAYPGR + EVW++G Sbjct: 268 TCHDADNPQRKRVDDISFSLRRGEILGIAGLVGAGRTELVSALFGAYPGRSQAEVWLDGV 327 Query: 189 RVDTGTPLKSIRLGLCMVPEDRKQHGIVPDLSVGQNITLTVLKNFSRGTRIDGEAELKT 247 +VDT TPLK+IRLGLCMVPEDRKQHGIVPDLSVGQNITL VLKNFSR TRID EAELKT Sbjct: 328 KVDTSTPLKAIRLGLCMVPEDRKQHGIVPDLSVGQNITLAVLKNFSRNTRIDAEAELKT 386 >ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65961.1| ABC-type D-xylose transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 518 Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust. Identities = 202/239 (84%), Positives = 217/239 (90%) Query: 9 GGHQQLVEIAKALNKKARLLILDEPSSSLTTSEIAVLLKIIKDLKAKGVACVYISHKLDE 68 GGHQQLVEIAKALNK ARLLILDEPSSSLT SEI VLLKIIKDLKA+GVACVYISHKLDE Sbjct: 148 GGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGVLLKIIKDLKARGVACVYISHKLDE 207 Query: 69 VAAVCDTISVIRDGKHIATTPMEELDVDRIITQMVGREITAMYPSRDHEVGEIVFEARHM 128 VA VCDTISVIRDGKHIATTPM+E+DVD+IITQMVGREITAMYP R+H +GE+V EAR++ Sbjct: 208 VAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVGREITAMYPERNHAIGEVVLEARNI 267 Query: 129 TCLDVDNPKRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYPGRCEGEVWMNGA 188 TC D+DNP+RKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAY GR EG+V + G Sbjct: 268 TCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYRGRYEGQVLLEGK 327 Query: 189 RVDTGTPLKSIRLGLCMVPEDRKQHGIVPDLSVGQNITLTVLKNFSRGTRIDGEAELKT 247 DT +PLKSIR GLCMVPEDRK HGIVPDL VGQNITLTVL FSRG+RIDG AELKT Sbjct: 328 PADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDVGQNITLTVLNRFSRGSRIDGSAELKT 386 >ref|YP_348033.1| xylose transporter ATP-binding subunit [Pseudomonas fluorescens Pf0-1] sp|Q3KDW2.1|XYLG_PSEPF RecName: Full=Xylose import ATP-binding protein XylG gb|ABA74044.1| xylose ABC transporter ATP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 518 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/237 (78%), Positives = 217/237 (91%) Query: 9 GGHQQLVEIAKALNKKARLLILDEPSSSLTTSEIAVLLKIIKDLKAKGVACVYISHKLDE 68 GG+QQLVEIAKALNK+ARLLILDEPSS+LT SEI VLL II+DLKAKGVACVYISHKLDE Sbjct: 148 GGYQQLVEIAKALNKQARLLILDEPSSALTRSEIEVLLDIIRDLKAKGVACVYISHKLDE 207 Query: 69 VAAVCDTISVIRDGKHIATTPMEELDVDRIITQMVGREITAMYPSRDHEVGEIVFEARHM 128 VAAVCDTISVIRDG+HIATT ME +D+ +IITQMVGRE++++YP+ H++GE++FEARH+ Sbjct: 208 VAAVCDTISVIRDGQHIATTAMENMDIPQIITQMVGREMSSLYPTEPHDIGEVIFEARHI 267 Query: 129 TCLDVDNPKRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYPGRCEGEVWMNGA 188 TC DVDNPKRKRVDDVSFS+RRGEILGIAGLVGAGRTELV+A+FGAYPGR EGEVW++G Sbjct: 268 TCYDVDNPKRKRVDDVSFSLRRGEILGIAGLVGAGRTELVTALFGAYPGRHEGEVWLDGH 327 Query: 189 RVDTGTPLKSIRLGLCMVPEDRKQHGIVPDLSVGQNITLTVLKNFSRGTRIDGEAEL 245 +DT TPLKSIR G+C+VPEDRK+ GI+PDL VGQNITL VL +FS+ TRID EAEL Sbjct: 328 PIDTRTPLKSIRAGVCLVPEDRKRQGIIPDLGVGQNITLAVLDSFSKLTRIDAEAEL 384 >ref|ZP_07259935.1| xylose transporter ATP-binding subunit [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 528 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/237 (78%), Positives = 214/237 (90%) Query: 9 GGHQQLVEIAKALNKKARLLILDEPSSSLTTSEIAVLLKIIKDLKAKGVACVYISHKLDE 68 GGHQQLVEIAKALNK+ARLLILDEPSS+LT SEI VLL II+DLKAKGVACVYISHKLDE Sbjct: 148 GGHQQLVEIAKALNKQARLLILDEPSSALTRSEIEVLLGIIRDLKAKGVACVYISHKLDE 207 Query: 69 VAAVCDTISVIRDGKHIATTPMEELDVDRIITQMVGREITAMYPSRDHEVGEIVFEARHM 128 VAAVCDTISVIRDGKHIATT M E+D+ +IITQMVGRE++ +YP+ H++GE++FEAR++ Sbjct: 208 VAAVCDTISVIRDGKHIATTAMAEMDIPKIITQMVGREMSNLYPTDAHDIGEVIFEARNI 267 Query: 129 TCLDVDNPKRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYPGRCEGEVWMNGA 188 TC DVDNPKRKRVDD+SF ++RGEILGIAGLVGAGRTELVSA+FGAYPGR GEVW++G Sbjct: 268 TCYDVDNPKRKRVDDISFVLKRGEILGIAGLVGAGRTELVSALFGAYPGRYSGEVWLDGQ 327 Query: 189 RVDTGTPLKSIRLGLCMVPEDRKQHGIVPDLSVGQNITLTVLKNFSRGTRIDGEAEL 245 VDT TPLKSIR GLCMVPEDRK+ GI+PD+ VGQNITL VL N+S+ TRID EAEL Sbjct: 328 PVDTRTPLKSIRAGLCMVPEDRKRQGIIPDMGVGQNITLAVLDNYSKMTRIDAEAEL 384 >ref|YP_235957.1| xylose transporter ATP-binding subunit [Pseudomonas syringae pv. syringae B728a] sp|Q4ZSF3.1|XYLG_PSEU2 RecName: Full=Xylose import ATP-binding protein XylG gb|AAY37919.1| xylose ABC transporter ATP-binding protein [Pseudomonas syringae pv. syringae B728a] Length = 518 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/237 (78%), Positives = 212/237 (89%) Query: 9 GGHQQLVEIAKALNKKARLLILDEPSSSLTTSEIAVLLKIIKDLKAKGVACVYISHKLDE 68 GG+QQLVEIAKALNKKARLLILDEPSS+LT SEI VLL II DLKAKGVACVYISHKLDE Sbjct: 148 GGYQQLVEIAKALNKKARLLILDEPSSALTRSEIEVLLDIIHDLKAKGVACVYISHKLDE 207 Query: 69 VAAVCDTISVIRDGKHIATTPMEELDVDRIITQMVGREITAMYPSRDHEVGEIVFEARHM 128 VAAVCDT+SVIRDGKHIATT M ++D+ +IITQMVGRE++ +YP+ H+VGE++FEARH+ Sbjct: 208 VAAVCDTVSVIRDGKHIATTAMADMDIPKIITQMVGREMSNLYPTEPHDVGEVIFEARHI 267 Query: 129 TCLDVDNPKRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYPGRCEGEVWMNGA 188 TC DVDNP+RKRVDDVSF +RRGEILGIAGLVGAGRTELVSA+FGAYPGR GEVW+NG Sbjct: 268 TCYDVDNPRRKRVDDVSFLLRRGEILGIAGLVGAGRTELVSALFGAYPGRYSGEVWLNGQ 327 Query: 189 RVDTGTPLKSIRLGLCMVPEDRKQHGIVPDLSVGQNITLTVLKNFSRGTRIDGEAEL 245 +DT TPLKSIR G+CMVPEDRK+ GI+PDL VGQNITL VL ++S TRID EAEL Sbjct: 328 AIDTRTPLKSIRAGVCMVPEDRKRQGIIPDLGVGQNITLAVLDSYSNMTRIDAEAEL 384