BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0127.p         (134 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspiril...   214   3e-54
gb|EGD03111.1| xylose transporter ATP-binding subunit [Burkholde...   207   6e-52
ref|ZP_02379538.1| D-xylose ABC transporter, ATPase subunit [Bur...   206   9e-52
ref|YP_626335.1| xylose transporter ATP-binding subunit [Burkhol...   205   2e-51
ref|YP_001773936.1| D-xylose ABC transporter, ATPase subunit [Bu...   205   2e-51

>ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65961.1| ABC-type D-xylose transport system, ATPase component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 518

 Score =  214 bits (545), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/114 (88%), Positives = 108/114 (94%)

Query: 1   MKGIVKQFDGVRALDGIDLKIKVGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIRWD 60
           MKGIVK F GVRAL+GID+KI+ GECVGLCGENGAGKSTLMKILSGVYPHGTW+GEI WD
Sbjct: 8   MKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEILWD 67

Query: 61  GQPLIANSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHELTLLGGRMNYPAM 114
           G+PL A+SVRDTEAAGIVIIHQELMLVPELSVAENIFMGHE+TL GGRMNYPAM
Sbjct: 68  GKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAM 121


>gb|EGD03111.1| xylose transporter ATP-binding subunit [Burkholderia sp. TJI49]
          Length = 519

 Score =  207 bits (526), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 94/114 (82%), Positives = 107/114 (93%)

Query: 1   MKGIVKQFDGVRALDGIDLKIKVGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIRWD 60
           M+GIVK+FDGV+ALDGIDL ++ GECVGLCGENGAGKSTLMK+LSGVYPHGTWDGEIRW+
Sbjct: 8   MRGIVKEFDGVKALDGIDLTVRPGECVGLCGENGAGKSTLMKVLSGVYPHGTWDGEIRWE 67

Query: 61  GQPLIANSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHELTLLGGRMNYPAM 114
           G PL+A+ VRDTE AGIVIIHQELMLVPELSVAENIF+G+E+TL GGRM+Y AM
Sbjct: 68  GAPLVASGVRDTERAGIVIIHQELMLVPELSVAENIFLGNEITLPGGRMHYAAM 121


>ref|ZP_02379538.1| D-xylose ABC transporter, ATPase subunit [Burkholderia ubonensis
           Bu]
          Length = 519

 Score =  206 bits (524), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 94/114 (82%), Positives = 106/114 (92%)

Query: 1   MKGIVKQFDGVRALDGIDLKIKVGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIRWD 60
           M+GIVK FDGV+ALDGIDL ++ GECVGLCGENGAGKSTLMK+LSGVYPHGTWDGEIRW+
Sbjct: 8   MRGIVKDFDGVKALDGIDLTVRPGECVGLCGENGAGKSTLMKVLSGVYPHGTWDGEIRWE 67

Query: 61  GQPLIANSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHELTLLGGRMNYPAM 114
           G PL+A+ VRDTE AGIVIIHQELMLVPELSVAENIF+G+E+TL GGRM+Y AM
Sbjct: 68  GAPLVASGVRDTERAGIVIIHQELMLVPELSVAENIFLGNEITLPGGRMHYAAM 121


>ref|YP_626335.1| xylose transporter ATP-binding subunit [Burkholderia cenocepacia AU
           1054]
 ref|YP_840359.1| xylose transporter ATP-binding subunit [Burkholderia cenocepacia
           HI2424]
 sp|Q1BG93.1|XYLG_BURCA RecName: Full=Xylose import ATP-binding protein XylG
 sp|A0KE53.1|XYLG_BURCH RecName: Full=Xylose import ATP-binding protein XylG
 gb|ABF81362.1| xylose ABC transporter ATP-binding protein [Burkholderia
           cenocepacia AU 1054]
 gb|ABK13466.1| xylose ABC transporter ATP-binding protein [Burkholderia
           cenocepacia HI2424]
          Length = 519

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/114 (82%), Positives = 105/114 (92%)

Query: 1   MKGIVKQFDGVRALDGIDLKIKVGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIRWD 60
           M+GIVK FDGV+ALDGIDL ++ GECVGLCGENGAGKSTLMK+LSGVYPHGTWDGEIRW+
Sbjct: 8   MRGIVKAFDGVKALDGIDLTVRPGECVGLCGENGAGKSTLMKVLSGVYPHGTWDGEIRWE 67

Query: 61  GQPLIANSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHELTLLGGRMNYPAM 114
           G PL A+ VRDTE AGIVIIHQELMLVPELSVAENIF+G+E+TL GGRMN+ AM
Sbjct: 68  GAPLAASGVRDTERAGIVIIHQELMLVPELSVAENIFLGNEITLPGGRMNFAAM 121


>ref|YP_001773936.1| D-xylose ABC transporter, ATPase subunit [Burkholderia cenocepacia
           MC0-3]
 gb|ACA95441.1| D-xylose ABC transporter, ATPase subunit [Burkholderia cenocepacia
           MC0-3]
          Length = 519

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/114 (82%), Positives = 105/114 (92%)

Query: 1   MKGIVKQFDGVRALDGIDLKIKVGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIRWD 60
           M+GIVK FDGV+ALDGIDL ++ GECVGLCGENGAGKSTLMK+LSGVYPHGTWDGEIRW+
Sbjct: 8   MRGIVKAFDGVKALDGIDLTVRPGECVGLCGENGAGKSTLMKVLSGVYPHGTWDGEIRWE 67

Query: 61  GQPLIANSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHELTLLGGRMNYPAM 114
           G PL A+ VRDTE AGIVIIHQELMLVPELSVAENIF+G+E+TL GGRMN+ AM
Sbjct: 68  GAPLAASGVRDTERAGIVIIHQELMLVPELSVAENIFLGNEITLPGGRMNFAAM 121