BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0094.p (541 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001355234.1| methyl-accepting chemotaxis protein [Janthin... 464 e-128 ref|YP_001355274.1| methyl-accepting chemotaxis protein [Janthin... 439 e-121 ref|YP_001352200.1| methyl-accepting chemotaxis protein [Janthin... 421 e-115 ref|YP_522744.1| methyl-accepting chemotaxis sensory transducer ... 410 e-112 ref|ZP_08407032.1| methyl-accepting chemotaxis sensory transduce... 403 e-110 >ref|YP_001355234.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89943.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 566 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 272/540 (50%), Positives = 369/540 (68%), Gaps = 14/540 (2%) Query: 4 LSHLNIGQRLGLGFGVVILLMLGLTVIGVYRLNQINGNIRSIANDFYPRTVMANTVKGAL 63 + +L IGQRL L FG V+ +++ L VI RL++++ I ++ND YP+TV A+ +K L Sbjct: 1 MKNLKIGQRLALSFGSVVAVLIVLAVIAFTRLDKLDAAIGMVSNDRYPKTVNAHIIKDTL 60 Query: 64 DETARSMRNLLFMSTVDEIKGELNAITRAGAVIDETLKRFARDTPSAEGKRMLDAVNAAR 123 +ETAR+MRN L M+ +IKGEL+ I + I E L + R S +G+ + A+ AR Sbjct: 61 NETARNMRNALLMTDAAQIKGELDTIEKGSVTIAEALDKLDRTIKSEKGRTYIKALTDAR 120 Query: 124 AQYTPVLDNFLAAVKDGQVEQARDLILPEIAPYQAAYFKALDNLIAFQGRGMEQAGQEAE 183 ++TPV D F+A V G +A+ L+ E+ P Q Y LD L+ FQ M +AG++A Sbjct: 121 GRFTPVKDKFVALVAQGMRAEAQILLFAEVRPAQLEYMLGLDRLVEFQSNLMHKAGEDAH 180 Query: 184 RVSGAASVLMIAMATIASLLAVLVGYSVMRSITRPLNAAINIAERVAGGDLSVRVENSAH 243 VS A L+ ++ IA +++ +G+ RSITRPL+ A+ +A +VA GDL+ + ++ Sbjct: 181 EVSANAQQLVGILSVIAVIISAFLGFLATRSITRPLSQAVGLARKVADGDLTGTIVVTSK 240 Query: 244 DETGKLLTALQGMRDGLLNAVTQVRDGSDAISVAAREIAAGNANLSARTELQASTLEETA 303 DETG+LL ALQ M +GL+ VTQVR G+D I+ A+ +IA GN +LS+RTE QAS+LEETA Sbjct: 241 DETGQLLQALQDMNNGLVRIVTQVRMGTDTIATASSQIATGNLDLSSRTEEQASSLEETA 300 Query: 304 SSM----------LXNARQANQLVMNASQVATQGGDVVTQVVNTMREIKDSSRQIVEIIS 353 SSM NARQ+NQL + AS+VA +GG VV+QVV TM I DS+ +IV+II Sbjct: 301 SSMEELTSTVKQNADNARQSNQLALTASEVAVRGGAVVSQVVETMGSINDSANKIVDIIG 360 Query: 354 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRGLAQRSASAAKEIAGLIQNSVK 413 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSASAAKEI LI +SV+ Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKTLIDDSVE 420 Query: 414 KVDAGSTLVDQAGNTMQDIVRSVKHVADIMTEISAASDEQSAGIRQVNDAIEQIDDMTQQ 473 KV+ GS LV AG TM ++V SV+ V DIM EI+AAS EQ+ GI Q+N A+ Q+D +TQQ Sbjct: 421 KVNNGSRLVHDAGTTMAEVVESVRRVTDIMGEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 474 NSALVEQAAAAAQSMHDQSMALGRAVSIFKIEAPGDIQTIGIGGSHAEPAPARISYQEPA 533 N+ALVE+AAAAA+S+ DQ+ L + VS+FK++A + + + APA +PA Sbjct: 481 NAALVEEAAAAAESLQDQANNLSQVVSVFKLDANA----VALQATSRVAAPASRPVSKPA 536 >ref|YP_001355274.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89882.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 571 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 251/515 (48%), Positives = 351/515 (68%), Gaps = 10/515 (1%) Query: 4 LSHLNIGQRLGLGFGVVILLMLGLTVIGVYRLNQINGNIRSIANDFYPRTVMANTVKGAL 63 + +L IGQRL L FG +++L++ L + R+ +N I + D YP+TV+AN +K L Sbjct: 1 MKNLKIGQRLSLSFGSMVILLVVLATLAFTRIGGLNDAISEVDGDRYPKTVLANVMKDDL 60 Query: 64 DETARSMRNLLFMSTVDEIKGELNAITRAGAVIDETLKRFARDTPSAEGKRMLDAVNAAR 123 ++ AR+MRN L M+ I+ EL I +A ++ L + S G++ + + A R Sbjct: 61 NQIARNMRNALLMTEKAAIQAELTQIGKATDSLNNALVELEKTVRSERGRQTIAGLQADR 120 Query: 124 AQYTPVLDNFLAAVKDGQVEQARDLILPEIAPYQAAYFKALDNLIAFQGRGMEQAGQEAE 183 +++ P+ D+F+ G ++A L+ E+ P Q +Y ++D LI +Q M+++G EA Sbjct: 121 SKFLPLKDDFIKLASAGIKDEAVALLFAEVRPAQLSYLASIDKLIDYQNELMKKSGAEAN 180 Query: 184 RVSGAASVLMIAMATIASLLAVLVGYSVMRSITRPLNAAINIAERVAGGDLSVRVENSAH 243 + +L+ + IA L+A + RSITRPL+ A+ +A +VA GDL+ + + Sbjct: 181 AKASQTQLLIGIFSIIAVLIAAVFAVLATRSITRPLSQAVVLARKVADGDLTGSIVVESK 240 Query: 244 DETGKLLTALQGMRDGLLNAVTQVRDGSDAISVAAREIAAGNANLSARTELQASTLEETA 303 DETG+LL AL+ M +GLL VTQVR G+D I+ A+ +IA GN +LS+RTE QAS+LEETA Sbjct: 241 DETGQLLQALKDMNEGLLKIVTQVRLGTDTIASASHQIATGNLDLSSRTEQQASSLEETA 300 Query: 304 SSM----------LXNARQANQLVMNASQVATQGGDVVTQVVNTMREIKDSSRQIVEIIS 353 SSM NARQ+NQL ++AS+VA +GG VV++VV+TM EI DS+++IV+II Sbjct: 301 SSMEELTSTVKQNAENARQSNQLALSASEVAVRGGAVVSKVVDTMGEINDSAKKIVDIIG 360 Query: 354 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRGLAQRSASAAKEIAGLIQNSVK 413 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSASAAKEI LI +SV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIGDSVD 420 Query: 414 KVDAGSTLVDQAGNTMQDIVRSVKHVADIMTEISAASDEQSAGIRQVNDAIEQIDDMTQQ 473 KV GS LVD AG TM+++V SVK V DIM+EI+AAS EQ+ GI Q+N A+ Q+D +TQQ Sbjct: 421 KVSIGSRLVDDAGATMREVVESVKRVTDIMSEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 474 NSALVEQAAAAAQSMHDQSMALGRAVSIFKIEAPG 508 N+ALVE+AAAAA+S+ Q+ L + V +FK++ G Sbjct: 481 NAALVEEAAAAAESLQGQASHLSQVVGVFKLDGHG 515 >ref|YP_001352200.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89954.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 542 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 247/515 (47%), Positives = 341/515 (66%), Gaps = 10/515 (1%) Query: 1 MKKLSHLNIGQRLGLGFGVVILLMLGLTVIGVYRLNQINGNIRSIANDFYPRTVMANTVK 60 MK ++++ I Q+L L FGVV L++ +T++ +L Q+N +I+ I+ D YP+T++AN+V+ Sbjct: 1 MKMIANMKIRQKLTLSFGVVFALLVVITLLSNIQLGQLNNSIKLISKDRYPKTILANSVQ 60 Query: 61 GALDETARSMRNLLFMSTVDEIKGELNAITRAGAVIDETLKRFARDTPSAEGKRMLDAVN 120 +++ A ++R+++ S +IK ++ + ++E L++ + E R + A Sbjct: 61 IEVNKIALNLRDIMLSSDPAKIKQLVSDTQASDKKMNEGLEQLRAVAQTEEDNRYVSAAI 120 Query: 121 AARAQYTPVLDNFLAAVKDGQVEQARDLILPEIAPYQAAYFKALDNLIAFQGRGMEQAGQ 180 AR QY P D L +DG+ +A+ + P Q YF ALD + +QG M AG Sbjct: 121 VARDQYVPARDTLLQLAQDGKTAEAKTYLDQVFMPVQVKYFIALDAMFDYQGSLMNVAGD 180 Query: 181 EAERVSGAASVLMIAMATIASLLAVLVGYSVMRSITRPLNAAINIAERVAGGDLSVRVEN 240 A S A ++ +A I+ LL++ VG+ V RSITRPLN A+ +A RVA GDLS V Sbjct: 181 AASATSVQARTIINILAGISLLLSIAVGWWVTRSITRPLNTAVGVARRVAQGDLSGPVFV 240 Query: 241 SAHDETGKLLTALQGMRDGLLNAVTQVRDGSDAISVAAREIAAGNANLSARTELQASTLE 300 +E G+L+ AL+ M D L + VTQVR+G+ I+ A+ EIA GN +LS+RTE QAS+LE Sbjct: 241 KTTNEVGQLMAALKTMNDNLHHIVTQVRNGTGTIANASGEIARGNMDLSSRTEQQASSLE 300 Query: 301 ETASSM----------LXNARQANQLVMNASQVATQGGDVVTQVVNTMREIKDSSRQIVE 350 ETAS+M NA+QANQL +A++VA QGG VV +V+ TM I SS++I + Sbjct: 301 ETASAMEELTSTVRENADNAQQANQLAASATKVARQGGSVVHEVIATMAAINTSSKKIAD 360 Query: 351 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRGLAQRSASAAKEIAGLIQN 410 I VID IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA+AA EI LI + Sbjct: 361 ITGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSATAAMEIKALIDD 420 Query: 411 SVKKVDAGSTLVDQAGNTMQDIVRSVKHVADIMTEISAASDEQSAGIRQVNDAIEQIDDM 470 SV KVD GS LV QAG T+ ++V SV ++ I+ IS AS EQSAGI QV AI QID+ Sbjct: 421 SVAKVDNGSKLVQQAGLTIDEVVTSVGSLSGIVAAISNASQEQSAGIEQVGQAIVQIDEG 480 Query: 471 TQQNSALVEQAAAAAQSMHDQSMALGRAVSIFKIE 505 TQQN+ALVEQ+AAAAQS+ +Q+ L + VSIFK++ Sbjct: 481 TQQNAALVEQSAAAAQSLREQADQLMQLVSIFKLD 515 >ref|YP_522744.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69213.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 537 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 237/512 (46%), Positives = 339/512 (66%), Gaps = 10/512 (1%) Query: 3 KLSHLNIGQRLGLGFGVVILLMLGLTVIGVYRLNQINGNIRSIANDFYPRTVMANTVKGA 62 KL ++ I RL LGFG + LL+ + + ++++ +N + + P+ V+ N +KG Sbjct: 2 KLDNMKIATRLILGFGTLGLLIAFMGAVAQFKVSMMNQLFAQVIAERIPKIVLINDIKGD 61 Query: 63 LDETARSMRNLLFMSTVDEIKGELNAITRAGAVIDETLKRFARDTPSAEGKRMLDAVNAA 122 + A ++RN++ +S D+I E I A A I E LK+ A+G+ +L V A Sbjct: 62 VTLIADALRNMIILSDTDKITKEGARIPAARARIGERLKQLDTQITEAQGRAVLAKVTAT 121 Query: 123 RAQYTPVLDNFLAAVKDGQVEQARDLILPEIAPYQAAYFKALDNLIAFQGRGMEQAGQEA 182 R+QY P+ + GQV +A+ ++L ++ P Q AYF+ALD L+ +Q ++Q+ Sbjct: 122 RSQYDPLEAETMDLAAGGQVFEAKAMLLDKVRPAQQAYFEALDGLLKYQNTLLDQSTAAT 181 Query: 183 ERVSGAASVLMIAMATIASLLAVLVGYSVMRSITRPLNAAINIAERVAGGDLSVRVENSA 242 + + + +++ A IA + +L+ ++RSITRP+ A+ +A VA GDLS++ + S Sbjct: 182 QTAAASMPLVIGATLVIALAVGILLAVWIIRSITRPILQAVQLARGVAAGDLSMQFDASG 241 Query: 243 HDETGKLLTALQGMRDGLLNAVTQVRDGSDAISVAAREIAAGNANLSARTELQASTLEET 302 +E +LL AL+ M+ GL+ V +V G+ ++S A+ EIA GN +LSARTE QAS+LEET Sbjct: 242 KNEISQLLQALKEMQTGLVQVVCKVLQGAQSVSSASAEIAQGNHDLSARTESQASSLEET 301 Query: 303 ASSM----------LXNARQANQLVMNASQVATQGGDVVTQVVNTMREIKDSSRQIVEII 352 +SM +A QANQL MNAS VA GG VV QVV TM+ I D+S++I +II Sbjct: 302 TASMEELNSNVKHNADSAAQANQLAMNASTVAVTGGQVVAQVVQTMKGINDASKKISDII 361 Query: 353 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRGLAQRSASAAKEIAGLIQNSV 412 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LA RSA AAKEI LI SV Sbjct: 362 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKSLINASV 421 Query: 413 KKVDAGSTLVDQAGNTMQDIVRSVKHVADIMTEISAASDEQSAGIRQVNDAIEQIDDMTQ 472 ++V+ GSTLVDQAG TM ++V +++ V DIM+EISAAS +QSAG+ QV +A+ Q+D +TQ Sbjct: 422 ERVEQGSTLVDQAGATMTEVVSAIRRVTDIMSEISAASHQQSAGVSQVGEAVNQMDQVTQ 481 Query: 473 QNSALVEQAAAAAQSMHDQSMALGRAVSIFKI 504 QN+ALVE+ AAAA S+ Q+ L + V++FK+ Sbjct: 482 QNAALVEEMAAAASSLRTQAQDLVQVVAVFKL 513 >ref|ZP_08407032.1| methyl-accepting chemotaxis sensory transducer [Hylemonella gracilis ATCC 19624] gb|EGI75850.1| methyl-accepting chemotaxis sensory transducer [Hylemonella gracilis ATCC 19624] Length = 607 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 249/558 (44%), Positives = 352/558 (63%), Gaps = 28/558 (5%) Query: 1 MKKLSHLNIGQRLGLGFGVVILLMLGLTVIGVYRLNQINGNIRSIANDFYPRTVMANTVK 60 M +HL IG RL L ++ LL++G+ + + R I + I N N ++ Sbjct: 1 MDYFNHLKIGTRLALTLTILTLLLIGVGLQSIVRSADIQKGLEDIVNRRMVIIEEVNELR 60 Query: 61 GALDETARSMRNLLFMSTVDEIKGELNAITRAGAVIDETLKRFARDTPSAEGKRMLDAVN 120 +++ ARS+RNL + D+IK EL + + + E + R + S +G+ +L Sbjct: 61 LEVNQQARSIRNLAIFTNPDQIKAELAELAESRRQVTELVARVDANVQSPKGRELLKLAA 120 Query: 121 AARAQYTPVLDNFLAAVKDGQVEQARDLILPEIAPYQAAYFKALDNLIAFQGRGMEQAGQ 180 R ++ +D ++A ++DGQ + A +L ++ P Q AY K LD I FQ AG+ Sbjct: 121 DERVKFRDGVDRYVALLQDGQRDAAIAYLLSDVRPVQLAYLKTLDQQIEFQKSLSHDAGE 180 Query: 181 ------EAERVSGAASVLMIAMATIASLLAVLVGYSVMRSITRPLNAAINIAERVAGGDL 234 E RVS A +++ IA ++A +G ++RSITRP+ A+N+A+ VA GDL Sbjct: 181 TAISEVETLRVSVAVAIV------IALVVAFSLGVWIVRSITRPIEEAVNLAQAVAAGDL 234 Query: 235 SVRVENSAHDETGKLLTALQGMRDGLLNAVTQVRDGSDAISVAAREIAAGNANLSARTEL 294 S V+++ DETG+LL AL M+ L V VR GS++++ A+ +IA GN +LSARTE Sbjct: 235 SREVKSTRRDETGQLLQALGAMQQSLSKVVGIVRQGSESVATASAQIAQGNQDLSARTES 294 Query: 295 QASTLEETASSM----------LXNARQANQLVMNASQVATQGGDVVTQVVNTMREIKDS 344 QAS+LEETA+SM N+RQANQL AS VA QGG+VVTQVV TM+ I +S Sbjct: 295 QASSLEETAASMEELGSTVTQNADNSRQANQLAQKASSVAVQGGEVVTQVVETMKGISES 354 Query: 345 SRQIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRGLAQRSASAAKEI 404 S++I +IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LA RSA AAKEI Sbjct: 355 SKKISDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAGRSAEAAKEI 414 Query: 405 AGLIQNSVKKVDAGSTLVDQAGNTMQDIVRSVKHVADIMTEISAASDEQSAGIRQVNDAI 464 LI +SV +VDAG+ LVDQAG+TMQ++V S++ V D+M +ISAAS EQS G+ Q+ +A+ Sbjct: 415 KALISDSVTRVDAGAALVDQAGSTMQEVVHSIRRVTDLMGDISAASTEQSQGVAQIGEAV 474 Query: 465 EQIDDMTQQNSALVEQAAAAAQSMHDQSMALGRAVSIFKIEAPGDIQTIGIGGS--HAE- 521 +Q+D +TQQN+ALVE+ +AAA S+ Q+ L AV++FK+ +++ +G HA+ Sbjct: 475 QQMDQVTQQNAALVEEMSAAANSLKTQARELVDAVAVFKLAHGAELRASALGPMPVHAQA 534 Query: 522 ---PAPARISYQEPAPCR 536 P P + + P R Sbjct: 535 LSTPRPVQHTSSAREPAR 552