BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0084.p (360 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774866.1| anaerobic formate dehydrogenase [Herbaspiril... 518 e-145 ref|ZP_06838849.1| oxidoreductase alpha (molybdopterin) subunit ... 471 e-130 ref|YP_554008.1| oxidoreductase alpha (molybdopterin) subunit [B... 467 e-129 ref|YP_001889035.1| oxidoreductase alpha (molybdopterin) subunit... 461 e-127 ref|YP_555360.1| oxidoreductase alpha (molybdopterin) subunit [B... 441 e-122 >ref|YP_003774866.1| anaerobic formate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62958.1| anaerobic formate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 246/338 (72%), Positives = 281/338 (83%) Query: 1 MVPKEKLKQQYCFDVPEKKGLNTVEACEEILKEKISAFFMLGGNFVRAIPDHGRMEPAWR 60 +VP +KL+ Y F+ P +KGLNTVEACE+I ++SAFFMLGGNFVRAIPDHG ME AWR Sbjct: 445 LVPNDKLRALYHFEPPMEKGLNTVEACEKIRDGELSAFFMLGGNFVRAIPDHGVMEAAWR 504 Query: 61 KIPLTVQVVTRLNRSSVIHGRRSYLLPCLGRIEIDQQAGGAQAVSVEDSTGCMHGSRGMV 120 K+PLTVQVVT NRS VIHG+ SY+LPCLGRIEID+Q GG QAVSVEDSTGCMHGSRG Sbjct: 505 KLPLTVQVVTHFNRSCVIHGQTSYVLPCLGRIEIDRQRGGEQAVSVEDSTGCMHGSRGRA 564 Query: 121 KPASEHLLSEVAIVAEIAKRILIPNPRVNWTAWRADYSRIRNAIAETYPEIFHDFNERMW 180 +PAS HLLSE AIVAE+AKR+L NP+V+W W DY+RIR+AI TYP+IF DFN RMW Sbjct: 565 EPASPHLLSEPAIVAELAKRLLPFNPQVDWDGWVGDYARIRDAIEATYPDIFRDFNARMW 624 Query: 181 TPGGFARPLAARERKWKTENGKANFITPDSFDEDPDMPADGPDVLRLMTTRGDSQFNTTV 240 PGGFARPLAARER+WKT NG+ANF+TPD FD DPDMP D P+VLRLMTTRGDSQFNTTV Sbjct: 625 NPGGFARPLAARERQWKTPNGRANFMTPDGFDPDPDMPGDAPEVLRLMTTRGDSQFNTTV 684 Query: 241 YGLDDRFRGVHGTRHMLLMHVADIERLGLAEGDMVTAATVSQDGIARSVDNLRVHAFDIP 300 Y LDDRFRGV GTR +LLM++ D+++ GLA GD V A TVS DG+ R V +LRV FDIP Sbjct: 685 YSLDDRFRGVWGTRRVLLMNLRDLQQHGLAAGDFVCAETVSADGVERRVPHLRVEPFDIP 744 Query: 301 AGCIMGYFPELNPLIPLAHHARDSKVPAAKSIPVRLTP 338 GC+MGYFPELN LIPL HHAR SKVPAAKS+P+RL P Sbjct: 745 VGCVMGYFPELNRLIPLFHHARGSKVPAAKSVPIRLIP 782 >ref|ZP_06838849.1| oxidoreductase alpha (molybdopterin) subunit [Burkholderia sp. Ch1-1] gb|EFG73295.1| oxidoreductase alpha (molybdopterin) subunit [Burkholderia sp. Ch1-1] Length = 786 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 225/336 (66%), Positives = 262/336 (77%) Query: 1 MVPKEKLKQQYCFDVPEKKGLNTVEACEEILKEKISAFFMLGGNFVRAIPDHGRMEPAWR 60 + P +KLKQ Y F+ P KGL TVEAC +L K+ AF LGGNF AIPDH M+PAWR Sbjct: 440 LAPLDKLKQLYGFEPPRDKGLTTVEACRGVLDGKVKAFIGLGGNFQVAIPDHHVMDPAWR 499 Query: 61 KIPLTVQVVTRLNRSSVIHGRRSYLLPCLGRIEIDQQAGGAQAVSVEDSTGCMHGSRGMV 120 ++ LTVQ+ T+LNRS ++HG +YLLPCLGRIEID+QAGG Q VSVEDST C+HGS G+ Sbjct: 500 RLRLTVQIATKLNRSHLLHGEVAYLLPCLGRIEIDRQAGGEQWVSVEDSTACVHGSHGLA 559 Query: 121 KPASEHLLSEVAIVAEIAKRILIPNPRVNWTAWRADYSRIRNAIAETYPEIFHDFNERMW 180 +PA + LLSE AIVA IAK +L NP V+W AW DY+ +R AI TYP+ F DFN+R Sbjct: 560 EPAGDMLLSEPAIVAGIAKALLPRNPNVDWDAWVNDYALVREAIERTYPDQFKDFNQRFR 619 Query: 181 TPGGFARPLAARERKWKTENGKANFITPDSFDEDPDMPADGPDVLRLMTTRGDSQFNTTV 240 PGGF RPLAA ERKW TE+GKANFI PD+ DED DMP+ GPDVLRLMTTRGDSQFNTTV Sbjct: 620 QPGGFHRPLAACERKWNTESGKANFIVPDTLDEDADMPSRGPDVLRLMTTRGDSQFNTTV 679 Query: 241 YGLDDRFRGVHGTRHMLLMHVADIERLGLAEGDMVTAATVSQDGIARSVDNLRVHAFDIP 300 YG DDRFRGVHGTR +LLMH D+ RLGLAEG V +T S DGIAR VD + VHAFDIP Sbjct: 680 YGPDDRFRGVHGTRDVLLMHQDDMTRLGLAEGAAVCISTDSNDGIAREVDGMHVHAFDIP 739 Query: 301 AGCIMGYFPELNPLIPLAHHARDSKVPAAKSIPVRL 336 GC+MGY+PE N LIPL+HHA+ S+VPA+KSIPVRL Sbjct: 740 PGCVMGYYPECNRLIPLSHHAKSSQVPASKSIPVRL 775 >ref|YP_554008.1| oxidoreductase alpha (molybdopterin) subunit [Burkholderia xenovorans LB400] gb|ABE34658.1| Oxidoreductase alpha (molybdopterin) subunit [Burkholderia xenovorans LB400] Length = 786 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 222/336 (66%), Positives = 262/336 (77%) Query: 1 MVPKEKLKQQYCFDVPEKKGLNTVEACEEILKEKISAFFMLGGNFVRAIPDHGRMEPAWR 60 + P +KLK+ Y F+ P KG+ TVEAC +L K+ AF LGGNF AIPDH M+PAWR Sbjct: 440 LAPLDKLKELYGFEPPRDKGMTTVEACRGVLDGKVKAFIGLGGNFQVAIPDHHVMDPAWR 499 Query: 61 KIPLTVQVVTRLNRSSVIHGRRSYLLPCLGRIEIDQQAGGAQAVSVEDSTGCMHGSRGMV 120 ++ LTVQ+ T+LNRS ++HG +YLLPCLGRIEID+QA G Q VSVEDST C+HGS G+ Sbjct: 500 RLRLTVQIATKLNRSHLLHGEVAYLLPCLGRIEIDRQASGEQWVSVEDSTACVHGSHGLA 559 Query: 121 KPASEHLLSEVAIVAEIAKRILIPNPRVNWTAWRADYSRIRNAIAETYPEIFHDFNERMW 180 +PA + LLSE AIVA IAK +L NP V+W AW DY+ +R AI TYP+ F DFN+R Sbjct: 560 EPAGDMLLSEPAIVAGIAKALLPRNPDVDWDAWVNDYALVREAIERTYPDQFKDFNQRFR 619 Query: 181 TPGGFARPLAARERKWKTENGKANFITPDSFDEDPDMPADGPDVLRLMTTRGDSQFNTTV 240 PGGF RPLAA RKW TE+GKANFI PD+ DED DMP+ GPDVLRLMTTRGDSQFNTTV Sbjct: 620 QPGGFHRPLAACGRKWNTESGKANFIVPDTLDEDADMPSRGPDVLRLMTTRGDSQFNTTV 679 Query: 241 YGLDDRFRGVHGTRHMLLMHVADIERLGLAEGDMVTAATVSQDGIARSVDNLRVHAFDIP 300 YGLDDRFRGVHGTR +LLMH D+ RLGLAEGD V +T S DG+ R VD +RVHAFDIP Sbjct: 680 YGLDDRFRGVHGTRDVLLMHQDDMTRLGLAEGDAVCVSTDSNDGVPREVDGMRVHAFDIP 739 Query: 301 AGCIMGYFPELNPLIPLAHHARDSKVPAAKSIPVRL 336 GCIMGY+PE N LIPL+HHA+ S+VPA+KS+PVRL Sbjct: 740 PGCIMGYYPECNRLIPLSHHAKASQVPASKSVPVRL 775 >ref|YP_001889035.1| oxidoreductase alpha (molybdopterin) subunit [Burkholderia phytofirmans PsJN] gb|ACD19665.1| oxidoreductase alpha (molybdopterin) subunit [Burkholderia phytofirmans PsJN] Length = 788 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 216/336 (64%), Positives = 262/336 (77%) Query: 1 MVPKEKLKQQYCFDVPEKKGLNTVEACEEILKEKISAFFMLGGNFVRAIPDHGRMEPAWR 60 + P +KLK+ Y F+ P KG+ TVEAC +L K+ AF LGGNF AIPDH M+PAW+ Sbjct: 443 LAPLDKLKELYGFEPPRNKGMTTVEACRGVLDGKVKAFIGLGGNFQVAIPDHHVMDPAWQ 502 Query: 61 KIPLTVQVVTRLNRSSVIHGRRSYLLPCLGRIEIDQQAGGAQAVSVEDSTGCMHGSRGMV 120 ++ LTVQ+ T+LNRS ++HG +YLLPCLGRIEID+QA G Q VSVEDST C+HGS G+ Sbjct: 503 RLRLTVQIATKLNRSHLLHGEVAYLLPCLGRIEIDRQASGEQWVSVEDSTACVHGSHGLA 562 Query: 121 KPASEHLLSEVAIVAEIAKRILIPNPRVNWTAWRADYSRIRNAIAETYPEIFHDFNERMW 180 +PA + LLSE AIVA +AK +L NP+++W AW DYS +R+AI TYP+ F DFN R Sbjct: 563 EPAGDMLLSEPAIVAGLAKALLPRNPKIDWDAWVDDYSLVRDAIERTYPDQFKDFNRRFR 622 Query: 181 TPGGFARPLAARERKWKTENGKANFITPDSFDEDPDMPADGPDVLRLMTTRGDSQFNTTV 240 PGGF RPLAA ERKWKTE+GKANFI P++ DED DMP+ GPDVLRLMT RGDSQFNTTV Sbjct: 623 EPGGFHRPLAACERKWKTESGKANFIVPETLDEDADMPSRGPDVLRLMTARGDSQFNTTV 682 Query: 241 YGLDDRFRGVHGTRHMLLMHVADIERLGLAEGDMVTAATVSQDGIARSVDNLRVHAFDIP 300 YGLDDRFRGV+G+R++LLMH D+ + G AEGD V +TVS DG+ R VD + VHAFDIP Sbjct: 683 YGLDDRFRGVYGSRNVLLMHQDDMTQRGFAEGDAVCISTVSNDGVTREVDGMHVHAFDIP 742 Query: 301 AGCIMGYFPELNPLIPLAHHARDSKVPAAKSIPVRL 336 GCIMGY+PE N LIPL+HHA S+VPA+KSIPVRL Sbjct: 743 PGCIMGYYPECNRLIPLSHHAESSQVPASKSIPVRL 778 >ref|YP_555360.1| oxidoreductase alpha (molybdopterin) subunit [Burkholderia xenovorans LB400] gb|ABE36010.1| Oxidoreductase alpha (molybdopterin) subunit [Burkholderia xenovorans LB400] Length = 764 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 209/341 (61%), Positives = 259/341 (75%), Gaps = 1/341 (0%) Query: 1 MVPKEKLKQQYCFDVPEKKGLNTVEACEEILKEKISAFFMLGGNFVRAIPDHGRMEPAWR 60 + P +KL +QY F P K+G+ TV+AC+ ++ K+ A F LGGN VR++PD +EPAWR Sbjct: 424 LAPLDKLAEQYHFTPPRKEGMATVDACKGVIDGKVRAVFQLGGNLVRSVPDRYAIEPAWR 483 Query: 61 KIPLTVQVVTRLNRSSVIHGRRSYLLPCLGRIEIDQQAGGAQAVSVEDSTGCMHGSRGMV 120 K+ LTV + T+LNRS ++HG SYLLPCL RIEID++ G AQAV++EDSTGCMHGS G+ Sbjct: 484 KLRLTVSIATKLNRSHLVHGEVSYLLPCLSRIEIDERMGNAQAVAMEDSTGCMHGSHGVA 543 Query: 121 KPASEHLLSEVAIVAEIAKRILIPNPRVNWTAWRADYSRIRNAIAETYPEIFHDFNERMW 180 +PAS+ LLSE AIVA IAK L + V+W AW DY+ +R+AIAETYPEIFHDFN RMW Sbjct: 544 QPASDQLLSEPAIVAGIAKAAL-DSTSVDWDAWSNDYALVRDAIAETYPEIFHDFNARMW 602 Query: 181 TPGGFARPLAARERKWKTENGKANFITPDSFDEDPDMPADGPDVLRLMTTRGDSQFNTTV 240 TPGGF RPL ARERKW+T++GKA F+ P + +EDPDMP PD LRL T R DSQFNTT+ Sbjct: 603 TPGGFHRPLPARERKWETKSGKAEFMVPQTLNEDPDMPERQPDDLRLFTLRSDSQFNTTI 662 Query: 241 YGLDDRFRGVHGTRHMLLMHVADIERLGLAEGDMVTAATVSQDGIARSVDNLRVHAFDIP 300 Y LDDRFRGV GTR +LLM+ DIER GL V+ VS DGI R VD R+ FD+P Sbjct: 663 YTLDDRFRGVRGTRMVLLMNRRDIERHGLEADAEVSLEAVSPDGIPRRVDGFRIMEFDLP 722 Query: 301 AGCIMGYFPELNPLIPLAHHARDSKVPAAKSIPVRLTPTRT 341 AGC+ GY+PE NPLIPL+HHA++SKVPAAK+IPVR+ +T Sbjct: 723 AGCVAGYYPECNPLIPLSHHAKESKVPAAKAIPVRIVAAQT 763