BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0083.p (395 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775873.1| hypothetical protein Hsero_2466 [Herbaspiril... 565 e-159 emb|CAQ36911.1| protein of unknown function ucp012641 [Ralstonia... 404 e-110 ref|YP_003748333.1| hypothetical protein RCFBP_mp20520 [Ralstoni... 403 e-110 gb|AEG71971.1| protein of unknown function ucp012641 [Ralstonia ... 402 e-110 ref|ZP_00946178.1| Hypothetical cytosolic protein [Ralstonia sol... 401 e-110 >ref|YP_003775873.1| hypothetical protein Hsero_2466 [Herbaspirillum seropedicae SmR1] gb|ADJ63965.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 370 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 270/392 (68%), Positives = 307/392 (78%), Gaps = 26/392 (6%) Query: 1 LKTFHCDNCNKQVFFENTVCNHCGWMLGYQPEHQIMSSFTPVDPSEVGTEAPVDASTVLS 60 + TFHCDNC QVFFENTVC CGWMLGYQPE Q ++SF+ L Sbjct: 1 MNTFHCDNCGAQVFFENTVCGSCGWMLGYQPELQSITSFS-----------------ALE 43 Query: 61 TDASTDASDKSDTPLRWRSVNPLNAGKLFRQCSNYAQEQVCNWMLDDQDAHALCASCRLT 120 T A+ ++ P RWRSV P N G++F+QC NY +E +CNWMLD+Q+ H LCASCRLT Sbjct: 44 TPAAESGAEPG--PGRWRSVRPENEGRVFKQCLNYWRENICNWMLDEQETHELCASCRLT 101 Query: 121 TVIPSLDDPGNRILWQRLEVAKRRLLHSLWTMRLQPPPKMDDAGNGLSFEFLQDMPH-EK 179 VIP+LD+ NR+LW RLE AKRRLLH+LWT+RLQP PKM+D +GL+FEFLQD PH E+ Sbjct: 102 RVIPTLDEGNNRVLWSRLETAKRRLLHTLWTLRLQPAPKMEDEQSGLAFEFLQDQPHGER 161 Query: 180 IMTGHADGVITINIAEADPAYREKMREQMAEPYRTLLGHFRHESGHYYFDRLIAGTARLE 239 ++TGHADGVITINIAEADPAYRE+ REQMAEPYRTLLGHFRHESGHYYFDRL+AG+A LE Sbjct: 162 VLTGHADGVITINIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAGSAWLE 221 Query: 240 AFRALFGDETADYGQSLQRHYDNGPAQGWEQNFVSVYASSHPWEDWAETWAHYLHMFDTL 299 FR FGDE DYG +LQ+HY+NGP WE+ FVS YASSHPWEDWAETWAHYLHMFDTL Sbjct: 222 PFRQRFGDEREDYGAALQKHYENGPRADWEEQFVSAYASSHPWEDWAETWAHYLHMFDTL 281 Query: 300 ETAYACGVQLRPQHRGEQQLVIAASPVEEDSFDALAREWFALTYVLNSLNRSIGMPDSYP 359 ETAYACGVQLRP+H GEQ+LVI A P SFD LAREWFALTYVLNSLNRSIGMPDSYP Sbjct: 282 ETAYACGVQLRPRHAGEQKLVIPAPPTAAGSFDELAREWFALTYVLNSLNRSIGMPDSYP 341 Query: 360 FMLSTPVLEKLRFVHAVVREAGIESAAALPEV 391 F LSTPVL KLRFVH +V S AA P++ Sbjct: 342 FTLSTPVLGKLRFVHELV------SGAAAPDL 367 >emb|CAQ36911.1| protein of unknown function ucp012641 [Ralstonia solanacearum MolK2] Length = 378 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 203/386 (52%), Positives = 246/386 (63%), Gaps = 32/386 (8%) Query: 1 LKTFHCDNCNKQVFFENTVCNHCGWMLGYQPEHQIMSSFTPVDPSEVGTEAPVDASTVLS 60 +KTFHC+ C + VFFEN C C +LGY P+ +S+F Sbjct: 24 MKTFHCNRCQQLVFFENVRCERCDALLGYLPDVGEISAFE-------------------- 63 Query: 61 TDASTDASDKSDTPLRWRSVNPLNAGKLFRQCSNYAQEQVCNWMLDDQDAHALCASCRLT 120 DA D RWRS++P G L RQC NYA E VCNWM+ D LC +C+ T Sbjct: 64 -----DAGDG-----RWRSLHPRAGGTLHRQCHNYAVENVCNWMVPDDAPDTLCRACQFT 113 Query: 121 TVIPSLDDPGNRILWQRLEVAKRRLLHSLWTMRLQPPPKMDDAGNGLSFEFLQDMPH-EK 179 IP+L P NR W RLE AKRRLL++L + L + + G GLSFEFL+ P E Sbjct: 114 GTIPNLSAPDNRFYWYRLETAKRRLLYTLTALGLPLHTRREQPGTGLSFEFLESAPEGEA 173 Query: 180 IMTGHADGVITINIAEADPAYREKMREQMAEPYRTLLGHFRHESGHYYFDRLIAGTARLE 239 +MTGH GVIT+NIAEAD A RE+ R + EPYRTLLGHFRHE+GHY+FDRLIAGT L Sbjct: 174 VMTGHDRGVITLNIAEADDAARERARTALGEPYRTLLGHFRHETGHYFFDRLIAGTRWLP 233 Query: 240 AFRALFGDETADYGQSLQRHYDNGPAQGWEQNFVSVYASSHPWEDWAETWAHYLHMFDTL 299 FR FGDE ADY +LQ HYDNGP W Q +S YA+ HPWEDWAETWAHYLHM DTL Sbjct: 234 LFRRRFGDERADYAAALQAHYDNGPPADWAQTHISAYATMHPWEDWAETWAHYLHMVDTL 293 Query: 300 ETAYACGVQLRPQHRGEQQLVIAASPVEEDSFDALAREWFALTYVLNSLNRSIGMPDSYP 359 +TA +CG+ L P H E L +PVEE FD+L + WF LTYVLNSLNRS+G+ D YP Sbjct: 294 DTAVSCGLVLLPDHPQEPALT-DQTPVEEAGFDSLMQRWFPLTYVLNSLNRSLGLADGYP 352 Query: 360 FMLSTPVLEKLRFVHAVVREAGIESA 385 F L+TPV++KLRFVH V+ + ++ Sbjct: 353 FTLATPVIDKLRFVHRVIAASAAKAG 378 >ref|YP_003748333.1| hypothetical protein RCFBP_mp20520 [Ralstonia solanacearum CFBP2957] emb|CBJ53946.1| conserved protein of unknown function, UCP012641 [Ralstonia solanacearum CFBP2957] Length = 378 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/386 (52%), Positives = 246/386 (63%), Gaps = 32/386 (8%) Query: 1 LKTFHCDNCNKQVFFENTVCNHCGWMLGYQPEHQIMSSFTPVDPSEVGTEAPVDASTVLS 60 +KTFHC+ C + VFFEN C HC +LGY P+ +S+F Sbjct: 24 MKTFHCNRCQQLVFFENVRCEHCDALLGYLPDVGEISAFE-------------------- 63 Query: 61 TDASTDASDKSDTPLRWRSVNPLNAGKLFRQCSNYAQEQVCNWMLDDQDAHALCASCRLT 120 DA D RWRS++P G L RQC NYA E VCNWM+ D LC +C+ T Sbjct: 64 -----DAGDG-----RWRSLHPRAGGALHRQCHNYAVENVCNWMVPDDAPDTLCRACQFT 113 Query: 121 TVIPSLDDPGNRILWQRLEVAKRRLLHSLWTMRLQPPPKMDDAGNGLSFEFLQDMPH-EK 179 IP+L P NR W RLE AKRRLL++L + L + + G GLSFEFL+ P E Sbjct: 114 GTIPNLSAPDNRFYWYRLEAAKRRLLYTLTALGLPLHTRREQPGTGLSFEFLESAPEGEA 173 Query: 180 IMTGHADGVITINIAEADPAYREKMREQMAEPYRTLLGHFRHESGHYYFDRLIAGTARLE 239 +MTGH GVIT+NIAEAD A RE+ R + EPYRTLLGHFRHE+GHY+FDRLIAGT L Sbjct: 174 VMTGHDRGVITLNIAEADDAARERARTALGEPYRTLLGHFRHETGHYFFDRLIAGTRWLP 233 Query: 240 AFRALFGDETADYGQSLQRHYDNGPAQGWEQNFVSVYASSHPWEDWAETWAHYLHMFDTL 299 FR FGDE ADY +LQ +YDNGP W Q +S YA+ HPWEDWAETWAHYLHM DTL Sbjct: 234 LFRRRFGDERADYAAALQAYYDNGPPADWAQTHISAYATMHPWEDWAETWAHYLHMVDTL 293 Query: 300 ETAYACGVQLRPQHRGEQQLVIAASPVEEDSFDALAREWFALTYVLNSLNRSIGMPDSYP 359 +TA +CG+ L P H E L +PVE FD+L + WF LTYVLNSLNRS+G+ D YP Sbjct: 294 DTAVSCGLVLLPDHPQEPALT-DQTPVEAAGFDSLMQRWFPLTYVLNSLNRSLGLADGYP 352 Query: 360 FMLSTPVLEKLRFVHAVVREAGIESA 385 F L+TPV++KLRFVH V+ + ++ Sbjct: 353 FTLATPVIDKLRFVHRVIATSAAKAG 378 >gb|AEG71971.1| protein of unknown function ucp012641 [Ralstonia solanacearum Po82] Length = 378 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/378 (53%), Positives = 243/378 (64%), Gaps = 32/378 (8%) Query: 1 LKTFHCDNCNKQVFFENTVCNHCGWMLGYQPEHQIMSSFTPVDPSEVGTEAPVDASTVLS 60 +KTFHC+ C + VFFEN C C +LGY P+ +S+F Sbjct: 24 MKTFHCNRCQQLVFFENVRCERCDALLGYLPDVGEISAFE-------------------- 63 Query: 61 TDASTDASDKSDTPLRWRSVNPLNAGKLFRQCSNYAQEQVCNWMLDDQDAHALCASCRLT 120 DA D RWRS++P G L RQC NYA E VCNWM+ D LC +C+ T Sbjct: 64 -----DAGDG-----RWRSLHPRAGGALHRQCHNYAVENVCNWMVPDDAPDTLCRACQFT 113 Query: 121 TVIPSLDDPGNRILWQRLEVAKRRLLHSLWTMRLQPPPKMDDAGNGLSFEFLQDMPH-EK 179 IP+L P NR W RLE AKRRLL++L + L + + G GLSFEFL+ P E Sbjct: 114 GTIPNLSAPDNRFYWYRLEAAKRRLLYTLTALGLPLHTRREQPGTGLSFEFLESAPEGEA 173 Query: 180 IMTGHADGVITINIAEADPAYREKMREQMAEPYRTLLGHFRHESGHYYFDRLIAGTARLE 239 +MTGH GVIT+NIAEAD A RE+ R + EPYRTLLGHFRHE+GHY+FDRLIAGT L Sbjct: 174 VMTGHDRGVITLNIAEADDAARERARTALGEPYRTLLGHFRHETGHYFFDRLIAGTRWLP 233 Query: 240 AFRALFGDETADYGQSLQRHYDNGPAQGWEQNFVSVYASSHPWEDWAETWAHYLHMFDTL 299 FR FGDE ADY +LQ +YDNGP W Q +S YA+ HPWEDWAETWAHYLHM DTL Sbjct: 234 LFRRRFGDERADYAAALQAYYDNGPPADWAQTHISAYATMHPWEDWAETWAHYLHMVDTL 293 Query: 300 ETAYACGVQLRPQHRGEQQLVIAASPVEEDSFDALAREWFALTYVLNSLNRSIGMPDSYP 359 +TA +CG+ L P H E L +PVEE FD+L + WF LTYVLNSLNRS+G+ D YP Sbjct: 294 DTAVSCGLVLLPDHPQEPALT-DQTPVEEAGFDSLMQRWFPLTYVLNSLNRSLGLADGYP 352 Query: 360 FMLSTPVLEKLRFVHAVV 377 F L+TPV++KLRFVH V+ Sbjct: 353 FTLATPVIDKLRFVHRVI 370 >ref|ZP_00946178.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551] ref|YP_002257790.1| protein of unknown function ucp012641 [Ralstonia solanacearum IPO1609] gb|EAP71346.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551] emb|CAQ59678.1| protein of unknown function ucp012641 [Ralstonia solanacearum IPO1609] Length = 378 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/386 (52%), Positives = 246/386 (63%), Gaps = 32/386 (8%) Query: 1 LKTFHCDNCNKQVFFENTVCNHCGWMLGYQPEHQIMSSFTPVDPSEVGTEAPVDASTVLS 60 +KTFHC+ C + VFFEN C C +LGY P+ +S+F Sbjct: 24 MKTFHCNRCQQLVFFENVRCERCDALLGYLPDVGEISAFE-------------------- 63 Query: 61 TDASTDASDKSDTPLRWRSVNPLNAGKLFRQCSNYAQEQVCNWMLDDQDAHALCASCRLT 120 DA D RWRS++P G L RQC NYA E VCNWM+ D LC +C+ T Sbjct: 64 -----DAGDG-----RWRSLHPRAGGTLHRQCHNYAVENVCNWMVPDDAPDTLCRACQFT 113 Query: 121 TVIPSLDDPGNRILWQRLEVAKRRLLHSLWTMRLQPPPKMDDAGNGLSFEFLQDMPH-EK 179 IP+L P NR W RLE AKRRLL++L + L + + G GLSFEFL+ P E Sbjct: 114 GTIPNLSAPDNRFYWYRLEAAKRRLLYTLTALGLSLHTRREQPGTGLSFEFLESAPEGEA 173 Query: 180 IMTGHADGVITINIAEADPAYREKMREQMAEPYRTLLGHFRHESGHYYFDRLIAGTARLE 239 +MTGH GVIT+NIAEAD A RE+ R + EPYRTLLGHFRHE+GHY+FDRLIAGT L Sbjct: 174 VMTGHDRGVITLNIAEADDAARERARTALGEPYRTLLGHFRHETGHYFFDRLIAGTRWLP 233 Query: 240 AFRALFGDETADYGQSLQRHYDNGPAQGWEQNFVSVYASSHPWEDWAETWAHYLHMFDTL 299 FR FGDE ADY +LQ +YD+GP W Q +S YA+ HPWEDWAETWAHYLHM DTL Sbjct: 234 LFRRRFGDERADYAAALQAYYDSGPPADWAQTHISAYATMHPWEDWAETWAHYLHMVDTL 293 Query: 300 ETAYACGVQLRPQHRGEQQLVIAASPVEEDSFDALAREWFALTYVLNSLNRSIGMPDSYP 359 +TA +CG+ L P H E L +PVEE FD+L + WF LTYVLNSLNRS+G+ D YP Sbjct: 294 DTAVSCGLVLLPDHPQEPALT-DQTPVEEAGFDSLMQRWFPLTYVLNSLNRSLGLADGYP 352 Query: 360 FMLSTPVLEKLRFVHAVVREAGIESA 385 F L+TPV++KLRFVH V+ + ++ Sbjct: 353 FTLATPVIDKLRFVHRVIAASATKAG 378