BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0078.p (478 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751796.1| exodeoxyribonuclease I [Collimonas fungivora... 777 0.0 ref|YP_001352252.1| exonuclease I [Janthinobacterium sp. Marseil... 761 0.0 ref|YP_001098913.1| exonuclease I [Herminiimonas arsenicoxydans]... 761 0.0 ref|YP_549751.1| exonuclease I [Polaromonas sp. JS666] >gi|91698... 750 0.0 ref|YP_002944544.1| exonuclease I [Variovorax paradoxus S110] >g... 749 0.0 >ref|YP_004751796.1| exodeoxyribonuclease I [Collimonas fungivorans Ter331] gb|AEK60973.1| Exodeoxyribonuclease I [Collimonas fungivorans Ter331] Length = 477 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/477 (76%), Positives = 416/477 (87%), Gaps = 1/477 (0%) Query: 1 MSNHTFLWHDYETFGAQARRDRPAQFAAIRTDADLNEIGDPIMIYCKPAPDFVPDPQSCL 60 MS HTFLWHDYETFG Q RRDRPAQFAAIRTDA+LNEIG+PIM+YC+PA DF+PDPQSCL Sbjct: 1 MSTHTFLWHDYETFGVQPRRDRPAQFAAIRTDAELNEIGEPIMLYCQPANDFLPDPQSCL 60 Query: 61 ITGITPQICLERGIPEYQFAAQIEQAMSEPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA 120 ITGITPQ CLERGIPEYQFAAQIE+A SE GTIGVGYNTIRFDDE+TRF+FWRNLIDPYA Sbjct: 61 ITGITPQQCLERGIPEYQFAAQIEKAFSEAGTIGVGYNTIRFDDEVTRFLFWRNLIDPYA 120 Query: 121 REWQNGCGRWDLLDVVRTTYALRHEGIEWPKKEDGVTPSFKLEHLSKANGLLHEAAHDAL 180 REWQN CGRWD+LDVVRT YALR EGI+WP ++G PSF+LE L+KANGL HEAAHDAL Sbjct: 121 REWQNQCGRWDILDVVRTAYALRPEGIQWPVNDEG-RPSFRLELLTKANGLSHEAAHDAL 179 Query: 181 SDVRATIAFARLIRNKQPRLFDFCLALHKKDRVATELGLPLAKPFLHVSGMFPAAQGCLA 240 SDVRATIA ARLIR QP+LFDFCLALHKKDR E+GLP +PFLH+SGMFPA QGCLA Sbjct: 180 SDVRATIALARLIRQHQPKLFDFCLALHKKDRAGAEIGLPTPRPFLHISGMFPAEQGCLA 239 Query: 241 VMWPLGTHPTNKNEVIAWDLSRDPRELAGLDADTIRTRMFSKTDDLPEGVTRLPVKTIHL 300 VMWPLG HPTNKNE++AWDL+ DP EL LDADT+RTR+FSK+ DLPEGVTRLP+K++HL Sbjct: 240 VMWPLGVHPTNKNEILAWDLAFDPSELFSLDADTVRTRLFSKSADLPEGVTRLPLKSVHL 299 Query: 301 NKSPMVIASLKTLTAQRAAEFNLDIDAALQNAVAAAALPEMSAIWTKVFQRPKEAPNDVD 360 NKSPMVI L+TL+A + +DI AL++A AA P++S +W +VFQRP+EA +DVD Sbjct: 300 NKSPMVINKLQTLSADMTTRWGIDIPLALRHAEIAAQAPDLSGLWRQVFQRPEEAASDVD 359 Query: 361 EDLYGGFVGNNDRRQLTQLRALTPLQLAQTKVSFDDVRLEELLFRYRARNFPETLSPEET 420 EDLYGGFVGNNDRR+L LRA+ P +LA +VSFDD RLEEL FRYRARNFP+TL+PEE Sbjct: 360 EDLYGGFVGNNDRRKLNDLRAMPPQKLAAARVSFDDQRLEELAFRYRARNFPDTLTPEEQ 419 Query: 421 QRWEEHRAARLFDGKGGARTLDGLFEEIDQLSESVDERGEEILGALYDYAEMIAPER 477 +RW+EHRAARLFDG+G ART+D LFEEIDQLSE+ DERGEEILGALYDYAEMIAP R Sbjct: 420 ERWDEHRAARLFDGEGKARTVDMLFEEIDQLSETADERGEEILGALYDYAEMIAPAR 476 >ref|YP_001352252.1| exonuclease I [Janthinobacterium sp. Marseille] gb|ABR89104.1| exodeoxyribonuclease I [Janthinobacterium sp. Marseille] Length = 476 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/477 (75%), Positives = 410/477 (85%), Gaps = 1/477 (0%) Query: 1 MSNHTFLWHDYETFGAQARRDRPAQFAAIRTDADLNEIGDPIMIYCKPAPDFVPDPQSCL 60 MS HTFLWHDYETFG Q RRDRPAQFAAIRTDA+LNEIG+PIM+YCKPA DF+PDPQSCL Sbjct: 1 MSTHTFLWHDYETFGIQPRRDRPAQFAAIRTDAELNEIGEPIMLYCKPANDFLPDPQSCL 60 Query: 61 ITGITPQICLERGIPEYQFAAQIEQAMSEPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA 120 ITGITPQ CLERG+PE++FAA+IE+A+S+ GTIGVGYNTIRFDDE+TRFMFWRNLIDPYA Sbjct: 61 ITGITPQTCLERGVPEHEFAAEIEKALSQTGTIGVGYNTIRFDDEVTRFMFWRNLIDPYA 120 Query: 121 REWQNGCGRWDLLDVVRTTYALRHEGIEWPKKEDGVTPSFKLEHLSKANGLLHEAAHDAL 180 REWQN CGRWD+LDVVRT YALR EGI WPK DG PSF+LE L+ NG+ HEAAHDAL Sbjct: 121 REWQNSCGRWDILDVVRTAYALRPEGINWPKHPDG-RPSFRLEQLTAENGIAHEAAHDAL 179 Query: 181 SDVRATIAFARLIRNKQPRLFDFCLALHKKDRVATELGLPLAKPFLHVSGMFPAAQGCLA 240 SDVRATIA ARLIR +QP+LFDFCL LHKKD+VA E+GLPL +PFLH++GM PA +GC+A Sbjct: 180 SDVRATIALARLIRERQPKLFDFCLGLHKKDKVAAEIGLPLRRPFLHITGMIPAERGCIA 239 Query: 241 VMWPLGTHPTNKNEVIAWDLSRDPRELAGLDADTIRTRMFSKTDDLPEGVTRLPVKTIHL 300 V+WPL HPTNKNEVI WDLS DP ELA LDA+TIR RMFSK D LPEGV+RLP+KTIHL Sbjct: 240 VVWPLAVHPTNKNEVIVWDLSVDPSELATLDAETIRMRMFSKADALPEGVSRLPIKTIHL 299 Query: 301 NKSPMVIASLKTLTAQRAAEFNLDIDAALQNAVAAAALPEMSAIWTKVFQRPKEAPNDVD 360 NKSP+VI +LKTL+A+ ++ +DI AL++A AAA P+M+AIW VF RP+EA DVD Sbjct: 300 NKSPIVINNLKTLSAEMTEQWGIDIPTALRHAEVAAAAPDMTAIWQDVFYRPQEAAADVD 359 Query: 361 EDLYGGFVGNNDRRQLTQLRALTPLQLAQTKVSFDDVRLEELLFRYRARNFPETLSPEET 420 EDLYGGFVGNNDRR L +LRAL+P LAQ K F D RLEE+++RYRARNFP TL+ EE Sbjct: 360 EDLYGGFVGNNDRRTLQELRALSPEALAQAKPGFSDPRLEEIVWRYRARNFPHTLNEEEQ 419 Query: 421 QRWEEHRAARLFDGKGGARTLDGLFEEIDQLSESVDERGEEILGALYDYAEMIAPER 477 QRWE+HR ARLFDG+GGART++ LF EIDQLSE+ DERGEEILGALYDYAE IAP R Sbjct: 420 QRWEDHRVARLFDGEGGARTIETLFAEIDQLSETADERGEEILGALYDYAEAIAPSR 476 >ref|YP_001098913.1| exonuclease I [Herminiimonas arsenicoxydans] emb|CAL60786.1| Exodeoxyribonuclease I (Exonuclease I) (DNA deoxyribophosphodiesterase) (dRPase) [Herminiimonas arsenicoxydans] Length = 477 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/478 (74%), Positives = 410/478 (85%), Gaps = 1/478 (0%) Query: 1 MSNHTFLWHDYETFGAQARRDRPAQFAAIRTDADLNEIGDPIMIYCKPAPDFVPDPQSCL 60 MS HTFLWHDYETFG RRDRPAQFAAIRTDA+LNEIG PIM+YC+PA DF+PDPQSCL Sbjct: 1 MSTHTFLWHDYETFGINTRRDRPAQFAAIRTDAELNEIGAPIMLYCQPANDFLPDPQSCL 60 Query: 61 ITGITPQICLERGIPEYQFAAQIEQAMSEPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA 120 ITGITPQ+CLERGIPEYQFAA+IE +++ GTIGVGYNTIRFDDE+TRFMFWRNLIDPYA Sbjct: 61 ITGITPQVCLERGIPEYQFAAKIESELAQTGTIGVGYNTIRFDDEVTRFMFWRNLIDPYA 120 Query: 121 REWQNGCGRWDLLDVVRTTYALRHEGIEWPKKEDGVTPSFKLEHLSKANGLLHEAAHDAL 180 REWQN CGRWD+LDVVRT YALR EGI WP+ DG + SF+LE L+ ANG+ HEAAHDAL Sbjct: 121 REWQNACGRWDILDVVRTAYALRPEGINWPQHPDGRS-SFRLEQLTAANGIAHEAAHDAL 179 Query: 181 SDVRATIAFARLIRNKQPRLFDFCLALHKKDRVATELGLPLAKPFLHVSGMFPAAQGCLA 240 SDVRATIA ARLIR++QPRLFDFC ALHKKDRVATE+GLPL +PFLH++GMFPA +GC+ Sbjct: 180 SDVRATIALARLIRDRQPRLFDFCFALHKKDRVATEIGLPLRRPFLHITGMFPAERGCIG 239 Query: 241 VMWPLGTHPTNKNEVIAWDLSRDPRELAGLDADTIRTRMFSKTDDLPEGVTRLPVKTIHL 300 ++WPL HPTNKNEVI WDL+ DP ELA LDA+TIRTRMFSK D LPEGV+RLP+K+IHL Sbjct: 240 IVWPLAVHPTNKNEVIVWDLAADPSELATLDAETIRTRMFSKADALPEGVSRLPIKSIHL 299 Query: 301 NKSPMVIASLKTLTAQRAAEFNLDIDAALQNAVAAAALPEMSAIWTKVFQRPKEAPNDVD 360 NKSP+VI +LKTL+A+ A++ LD+ AL++A AA P+M+AIW VF RP+E DVD Sbjct: 300 NKSPVVINNLKTLSAEMTAQWGLDVATALRHAEIAATTPDMTAIWQDVFHRPQEGTPDVD 359 Query: 361 EDLYGGFVGNNDRRQLTQLRALTPLQLAQTKVSFDDVRLEELLFRYRARNFPETLSPEET 420 EDLYGGFVGNNDRR L +LRAL+P LA+ F D RLEEL +RYRARNFP+TLS EE Sbjct: 360 EDLYGGFVGNNDRRLLQELRALSPEALAKATPGFSDARLEELFWRYRARNFPQTLSAEEA 419 Query: 421 QRWEEHRAARLFDGKGGARTLDGLFEEIDQLSESVDERGEEILGALYDYAEMIAPERN 478 +RWEEHRAARLF+G GGART++G+F EIDQLSE+ DERGEEIL ALYDYAE IAP R+ Sbjct: 420 ERWEEHRAARLFNGDGGARTIEGMFAEIDQLSETADERGEEILAALYDYAEAIAPVRD 477 >ref|YP_549751.1| exonuclease I [Polaromonas sp. JS666] gb|ABE44853.1| Exodeoxyribonuclease I subunit C [Polaromonas sp. JS666] Length = 480 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/480 (73%), Positives = 410/480 (85%), Gaps = 5/480 (1%) Query: 1 MSNHTFLWHDYETFGAQARRDRPAQFAAIRTDADLNEIGDPIMIYCKPAPDFVPDPQSCL 60 M+ HTFLWHDYETFG RRDRP+QFA IRTDA+LNE+G+P+M+YC+PA D++PDP SCL Sbjct: 1 MAPHTFLWHDYETFGLNTRRDRPSQFAGIRTDAELNEVGEPLMLYCQPANDYLPDPASCL 60 Query: 61 ITGITPQICLERGIPEYQFAAQIEQAMSEPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA 120 ITGITPQ+CLERGIPE+ FAA+IEQ ++EPGTIGVGYNTIRFDDE+TR++FWRNLIDPYA Sbjct: 61 ITGITPQLCLERGIPEHAFAAKIEQLLAEPGTIGVGYNTIRFDDEVTRYLFWRNLIDPYA 120 Query: 121 REWQNGCGRWDLLDVVRTTYALRHEGIEWPKKEDGVTPSFKLEHLSKANGLLHEAAHDAL 180 REWQN CGRWDLLDVVR YALR EGI WP KEDG PSFKLE L++ANGLLHEAAHDAL Sbjct: 121 REWQNDCGRWDLLDVVRMAYALRPEGIVWPTKEDG-KPSFKLEDLARANGLLHEAAHDAL 179 Query: 181 SDVRATIAFARLIRNKQPRLFDFCLALHKKDRVATELGLPLAK----PFLHVSGMFPAAQ 236 SDVRATIA ARLIR QP+LFDFCL LHKKDRVA ELGLP ++ PFLHVSGMFP + Sbjct: 180 SDVRATIALARLIRKAQPKLFDFCLGLHKKDRVAAELGLPASRQSATPFLHVSGMFPPER 239 Query: 237 GCLAVMWPLGTHPTNKNEVIAWDLSRDPRELAGLDADTIRTRMFSKTDDLPEGVTRLPVK 296 GCLAVMWPL THPTNKNE++AWDL+ DP EL LD T+R R+F+++ DLPEGV RLP+K Sbjct: 240 GCLAVMWPLATHPTNKNELLAWDLAHDPSELPLLDVATLRQRLFTRSADLPEGVLRLPLK 299 Query: 297 TIHLNKSPMVIASLKTLTAQRAAEFNLDIDAALQNAVAAAALPEMSAIWTKVFQRPKEAP 356 ++HLNKSPMV+ L+TLT + A ++ +D+DAAL+NA AA LP+MSAIW +VFQRPKEA Sbjct: 300 SVHLNKSPMVVRKLQTLTPEMAVKWGVDMDAALRNAEKAAGLPDMSAIWPEVFQRPKEAA 359 Query: 357 NDVDEDLYGGFVGNNDRRQLTQLRALTPLQLAQTKVSFDDVRLEELLFRYRARNFPETLS 416 DVDEDLYGGFVGN DRR+L QLRAL+P +LA ++ FDD RL+ELLFRYRARNF ETL+ Sbjct: 360 PDVDEDLYGGFVGNADRRRLNQLRALSPAELAHSRTGFDDDRLQELLFRYRARNFAETLT 419 Query: 417 PEETQRWEEHRAARLFDGKGGARTLDGLFEEIDQLSESVDERGEEILGALYDYAEMIAPE 476 PEE +RWE HRAARL +G+GGAR +D LF EID LSE+ DERG+ ILGALYDYAE IAPE Sbjct: 420 PEEAERWEAHRAARLLEGEGGARNVDALFAEIDTLSETTDERGQAILGALYDYAEAIAPE 479 >ref|YP_002944544.1| exonuclease I [Variovorax paradoxus S110] gb|ACS19278.1| Exodeoxyribonuclease I [Variovorax paradoxus S110] Length = 479 Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/478 (74%), Positives = 412/478 (86%), Gaps = 5/478 (1%) Query: 3 NHTFLWHDYETFGAQARRDRPAQFAAIRTDADLNEIGDPIMIYCKPAPDFVPDPQSCLIT 62 NHTFLWHDYETFGA RRDRP+QFAAIRTDA+LNEIG+P+MIYCKPAPD++P P++CLIT Sbjct: 2 NHTFLWHDYETFGAVPRRDRPSQFAAIRTDAELNEIGEPLMIYCKPAPDYLPSPEACLIT 61 Query: 63 GITPQICLERGIPEYQFAAQIEQAMSEPGTIGVGYNTIRFDDEITRFMFWRNLIDPYARE 122 GITPQ+CLERGIPE+ FAAQIE+A S+PGTIGVGYNTIRFDDE+TRF+FWRNLIDPYARE Sbjct: 62 GITPQLCLERGIPEHAFAAQIEKAFSQPGTIGVGYNTIRFDDEVTRFLFWRNLIDPYARE 121 Query: 123 WQNGCGRWDLLDVVRTTYALRHEGIEWPKKEDGVTPSFKLEHLSKANGLLHEAAHDALSD 182 WQN CGRWDLLDVVR TYALR +GIEWPKKEDG PSFKLE L++ANGLLHE+AHDALSD Sbjct: 122 WQNDCGRWDLLDVVRLTYALRPDGIEWPKKEDG-KPSFKLEDLARANGLLHESAHDALSD 180 Query: 183 VRATIAFARLIRNKQPRLFDFCLALHKKDRVATELGLP----LAKPFLHVSGMFPAAQGC 238 VRATIA ARLIR +QP+LF+F LHKKDRVA+ELGLP A+PFLHVSGMFP +GC Sbjct: 181 VRATIALARLIRERQPKLFEFAFGLHKKDRVASELGLPAMRETARPFLHVSGMFPVERGC 240 Query: 239 LAVMWPLGTHPTNKNEVIAWDLSRDPRELAGLDADTIRTRMFSKTDDLPEGVTRLPVKTI 298 L VMWPL +HPTNKNE+IAWDL+ DP EL LD +T+R R+F++T DLPEGV RLPVK I Sbjct: 241 LGVMWPLASHPTNKNELIAWDLAHDPSELRDLDVETLRLRLFTRTADLPEGVVRLPVKGI 300 Query: 299 HLNKSPMVIASLKTLTAQRAAEFNLDIDAALQNAVAAAALPEMSAIWTKVFQRPKEAPND 358 HLNKSPMV+ +L+TL A +N+D+DAAL++A A LP+MSAIW++V+ RPKEA D Sbjct: 301 HLNKSPMVVGNLRTLAPAMAERWNVDLDAALRHAAIARDLPDMSAIWSQVYARPKEAVPD 360 Query: 359 VDEDLYGGFVGNNDRRQLTQLRALTPLQLAQTKVSFDDVRLEELLFRYRARNFPETLSPE 418 VDEDLYGGFVGN DRR+L QLRAL+P +LA+ + FDD RLEE+LFRYRARN+PE LS E Sbjct: 361 VDEDLYGGFVGNGDRRRLNQLRALSPEELAKDRTGFDDGRLEEILFRYRARNWPELLSSE 420 Query: 419 ETQRWEEHRAARLFDGKGGARTLDGLFEEIDQLSESVDERGEEILGALYDYAEMIAPE 476 E +RWE RAARLF G+GGART++ LF E+D LSE+ DERGEEILGALY+YAE IAPE Sbjct: 421 EAERWEALRAARLFKGEGGARTIEMLFSEVDALSETADERGEEILGALYEYAEAIAPE 478