BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0054.p (183 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776999.1| ADP-ribose pyrophosphatase [Herbaspirillum s... 320 6e-86 ref|YP_004751814.1| NUDIX hydrolase [Collimonas fungivorans Ter3... 295 2e-78 ref|ZP_02375061.1| pyrophosphatase, MutT/nudix family protein [B... 246 2e-63 ref|ZP_03570719.1| nudix hydrolase [Burkholderia multivorans CGD... 246 2e-63 ref|ZP_02894815.1| NUDIX hydrolase [Burkholderia ambifaria IOP40... 244 3e-63 >ref|YP_003776999.1| ADP-ribose pyrophosphatase [Herbaspirillum seropedicae SmR1] gb|ADJ65091.1| ADP-ribose pyrophosphatase protein [Herbaspirillum seropedicae SmR1] Length = 184 Score = 320 bits (820), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 152/180 (84%), Positives = 163/180 (90%) Query: 1 MSDFKFCPVCATSLVMRADEQEAGKLRLACPDGHWTHWDNPLPVLAALVEIDGKMLLARN 60 MS FKFCPVCA SL +RADE EAGK+RLACPDGHWTHWDNPLPVLAALVEIDGKML ARN Sbjct: 1 MSQFKFCPVCAASLELRADEGEAGKVRLACPDGHWTHWDNPLPVLAALVEIDGKMLTARN 60 Query: 61 AAWPEGRFALITGFMERDETPEQGIAREIKEETDLDANQITLIGVYEFMRKNELIIAYHV 120 AAW EGRFALITGFMERDETPEQGIARE+KEETDLDA +I LIGVYEFMRKNELIIAY+V Sbjct: 61 AAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQEIELIGVYEFMRKNELIIAYYV 120 Query: 121 KASGRIRLSPELLEYRLVAPPDLRPWPAGTGYAVAEWMRRHDLPVQFVEFAGSSTPLVSP 180 KASG IRLSPEL+EYRL DLRPWPAGTG+AVA+WMRR L VQ+VEFAGSSTP+ +P Sbjct: 121 KASGSIRLSPELVEYRLTEAADLRPWPAGTGHAVADWMRRRGLDVQYVEFAGSSTPIATP 180 >ref|YP_004751814.1| NUDIX hydrolase [Collimonas fungivorans Ter331] gb|AEK60991.1| NUDIX hydrolase [Collimonas fungivorans Ter331] Length = 184 Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 142/182 (78%), Positives = 158/182 (86%), Gaps = 5/182 (2%) Query: 1 MSDFKFCPVCATSLVMRADEQEAGKLRLACPDGHWTHWDNPLPVLAALVEIDGKMLLARN 60 MSDFKFCPVCATSL+ R+DE E GK RLACP+GHWTHWDNPLPVLAA+VEIDGK+LLARN Sbjct: 1 MSDFKFCPVCATSLIQRSDEGEGGKSRLACPEGHWTHWDNPLPVLAAIVEIDGKVLLARN 60 Query: 61 AAWPEGRFALITGFMERDETPEQGIAREIKEETDLDANQITLIGVYEFMRKNELIIAYHV 120 AAW EG FALITGFMERDETPEQGIAREIKEET+LDA Q+ L+GVYEFMRKNELIIAYHV Sbjct: 61 AAWEEGMFALITGFMERDETPEQGIAREIKEETNLDAEQVKLVGVYEFMRKNELIIAYHV 120 Query: 121 KASGRIRLSPELLEYRLVAPPDLRPWPAGTGYAVAEWMRRHDLPVQFVEFAGSSTPLVSP 180 KASG+IRLSPELLEYRL+ P LRPW AGTG+AVA+WMR L V++V+ PL+ Sbjct: 121 KASGQIRLSPELLEYRLLEPAALRPWRAGTGHAVADWMRAQGLAVEYVD-----RPLLQK 175 Query: 181 AQ 182 AQ Sbjct: 176 AQ 177 >ref|ZP_02375061.1| pyrophosphatase, MutT/nudix family protein [Burkholderia thailandensis TXDOH] Length = 184 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 116/176 (65%), Positives = 144/176 (81%), Gaps = 3/176 (1%) Query: 2 SDFKFCPVCATSLVMRADE-QEAGKLRLACPDGH--WTHWDNPLPVLAALVEIDGKMLLA 58 +D++FCP CA +L RAD +E G++R ACPD + HW+NP+PV+AA+VE +GK+LLA Sbjct: 4 ADYRFCPRCARALTERADPVEEGGRVRRACPDATCGYVHWNNPVPVVAAIVEYEGKILLA 63 Query: 59 RNAAWPEGRFALITGFMERDETPEQGIAREIKEETDLDANQITLIGVYEFMRKNELIIAY 118 RNAAWPEG FALITGF+E ETPE GIARE++EET L+A +TL+GVYEF+RKNELIIAY Sbjct: 64 RNAAWPEGTFALITGFLEHSETPEAGIAREVREETSLEAESVTLVGVYEFIRKNELIIAY 123 Query: 119 HVKASGRIRLSPELLEYRLVAPPDLRPWPAGTGYAVAEWMRRHDLPVQFVEFAGSS 174 HV+A+G IRLSPELLEYRLV PP LRPW AGTG AVA+WMR L +FV+F G++ Sbjct: 124 HVRANGTIRLSPELLEYRLVDPPKLRPWRAGTGQAVADWMRSRGLEFEFVDFPGAA 179 >ref|ZP_03570719.1| nudix hydrolase [Burkholderia multivorans CGD2M] ref|ZP_03577786.1| nudix hydrolase [Burkholderia multivorans CGD2] ref|ZP_03587933.1| nudix hydrolase [Burkholderia multivorans CGD1] gb|EED97670.1| nudix hydrolase [Burkholderia multivorans CGD1] gb|EEE08056.1| nudix hydrolase [Burkholderia multivorans CGD2] gb|EEE14006.1| nudix hydrolase [Burkholderia multivorans CGD2M] Length = 191 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 119/175 (68%), Positives = 143/175 (81%), Gaps = 3/175 (1%) Query: 2 SDFKFCPVCATSLVMRAD-EQEAGKLRLACPDG--HWTHWDNPLPVLAALVEIDGKMLLA 58 +D++FCP CA+ L+ RAD + E G+LR ACPD + HW+NPLPV+AA+VE+DGK+LLA Sbjct: 17 ADYRFCPRCASPLIERADPDHEGGRLRQACPDDACGYVHWNNPLPVVAAIVELDGKILLA 76 Query: 59 RNAAWPEGRFALITGFMERDETPEQGIAREIKEETDLDANQITLIGVYEFMRKNELIIAY 118 RNAAWPEG FALITGF+E ETPE GIARE++EET L+A QI L+GVYEF+RKNELIIAY Sbjct: 77 RNAAWPEGMFALITGFLEHGETPEDGIAREVREETGLNAEQIALVGVYEFIRKNELIIAY 136 Query: 119 HVKASGRIRLSPELLEYRLVAPPDLRPWPAGTGYAVAEWMRRHDLPVQFVEFAGS 173 HV+ASG + LSPELLEYRLV PP LRPW AGTGYA+A+WMR L QFV+ G Sbjct: 137 HVRASGTVTLSPELLEYRLVDPPLLRPWRAGTGYALADWMRARGLDFQFVDRPGQ 191 >ref|ZP_02894815.1| NUDIX hydrolase [Burkholderia ambifaria IOP40-10] gb|EDS99602.1| NUDIX hydrolase [Burkholderia ambifaria IOP40-10] Length = 178 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 119/175 (68%), Positives = 142/175 (81%), Gaps = 3/175 (1%) Query: 2 SDFKFCPVCATSLVMRAD-EQEAGKLRLACPDG--HWTHWDNPLPVLAALVEIDGKMLLA 58 +D++FCP CA+ L RAD E E G++R ACPD + HW+NPLPV+AA+VE+DGK+LLA Sbjct: 4 ADYRFCPRCASPLTERADPEHEGGRVRRACPDDACGYVHWNNPLPVVAAIVELDGKILLA 63 Query: 59 RNAAWPEGRFALITGFMERDETPEQGIAREIKEETDLDANQITLIGVYEFMRKNELIIAY 118 RNAAWPEG FALITGF+E ETPE GIARE+ EET L A Q+TL+GVYEF+RKNELIIAY Sbjct: 64 RNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEQVTLVGVYEFIRKNELIIAY 123 Query: 119 HVKASGRIRLSPELLEYRLVAPPDLRPWPAGTGYAVAEWMRRHDLPVQFVEFAGS 173 HV+ASG + LSPELLEYRLV PP LRPW AGTGYA+A+WMR L +FV+ AG Sbjct: 124 HVRASGTVALSPELLEYRLVDPPRLRPWRAGTGYALADWMRARGLDFEFVDRAGQ 178