BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0052.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003846726.1| heavy metal efflux pump, CzcA family [Gallio...   216   1e-54
ref|YP_004753172.1| RND divalent metal cation efflux transporter...   213   1e-53
ref|YP_586602.1| heavy metal cation tricomponent efflux pump Hmu...   211   4e-53
gb|EGM21837.1| Resistance-Nodulation-Cell Division (RND) divalen...   208   2e-52
ref|ZP_07793607.1| Resistance-Nodulation-Cell Division (RND) div...   208   2e-52

>ref|YP_003846726.1| heavy metal efflux pump, CzcA family [Gallionella capsiferriformans
            ES-2]
 gb|ADL54962.1| heavy metal efflux pump, CzcA family [Gallionella capsiferriformans
            ES-2]
          Length = 1060

 Score =  216 bits (549), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/143 (80%), Positives = 126/143 (88%), Gaps = 4/143 (2%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            G+P  LTGG+LAL +R IPLSISA VGFIALSGVAVLNGLVMIAFIRTLREEG+SLD AI
Sbjct: 914  GVPFALTGGILALWLRDIPLSISAGVGFIALSGVAVLNGLVMIAFIRTLREEGKSLDTAI 973

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
             EGA+TRLRPVLMTALVASLGF+PMA+ATGTGAEVQRPLATVVIGGILSST LTLLVLP+
Sbjct: 974  HEGALTRLRPVLMTALVASLGFIPMAIATGTGAEVQRPLATVVIGGILSSTALTLLVLPI 1033

Query: 121  LYRLVHAGDSEDDGTVGISPSSR 143
            LYRL H  + E+D   G+  SSR
Sbjct: 1034 LYRLAHRKEEEEDA--GVDASSR 1054


>ref|YP_004753172.1| RND divalent metal cation efflux transporter [Collimonas fungivorans
            Ter331]
 gb|AEK62349.1| RND divalent metal cation efflux transporter [Collimonas fungivorans
            Ter331]
          Length = 1057

 Score =  213 bits (541), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/136 (82%), Positives = 124/136 (91%), Gaps = 2/136 (1%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            GIP  LTGG++AL +RGIPLSISAAVGFIAL GVAVLNGLVMIAFIR+LREEGR LD AI
Sbjct: 914  GIPFALTGGIVALWLRGIPLSISAAVGFIALCGVAVLNGLVMIAFIRSLREEGRGLDAAI 973

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
             EGA+TRLRPVLMTALVASLGFVPMA+ATGTGAEVQRPLATVVIGGILSST+LTLLVLP+
Sbjct: 974  REGALTRLRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGILSSTILTLLVLPI 1033

Query: 121  LYRLVHAGDSEDDGTV 136
            LY+L H  D +++G V
Sbjct: 1034 LYQLFHRRDEDEEGKV 1049


>ref|YP_586602.1| heavy metal cation tricomponent efflux pump HmuA [Cupriavidus
            metallidurans CH34]
 gb|ABF11333.1| heavy metal cation tricomponent efflux pump HmuA (CzcA-like)
            [Cupriavidus metallidurans CH34]
          Length = 1043

 Score =  211 bits (536), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/126 (88%), Positives = 119/126 (94%), Gaps = 2/126 (1%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            GIP  LTGGVLAL MRGIPLSISAAVGFIALSGVAVLNGLVM++FIR+LREEGRSLDDA+
Sbjct: 912  GIPFALTGGVLALWMRGIPLSISAAVGFIALSGVAVLNGLVMLSFIRSLREEGRSLDDAV 971

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
            F GA+TRLRPVLMTALVASLGFVPMA+ATGTGAEVQRPLATVVIGGILSST LTLLVLP+
Sbjct: 972  FNGALTRLRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGILSSTALTLLVLPV 1031

Query: 121  LYRLVH 126
            LYR  H
Sbjct: 1032 LYRWAH 1037


>gb|EGM21837.1| Resistance-Nodulation-Cell Division (RND) divalent metal cation
            efflux transporter CzcA [Pseudomonas aeruginosa 152504]
          Length = 1051

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 120/130 (92%), Gaps = 2/130 (1%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            GIP  LTGGVLAL +RGIPLSISAAVGFIALSGVAVLNGLVMI+FIR L +EGRSLD A+
Sbjct: 912  GIPFALTGGVLALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLLQEGRSLDQAV 971

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
            +EGA+TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSST+LTLLVLP+
Sbjct: 972  WEGAITRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTMLTLLVLPV 1031

Query: 121  LYRLVHAGDS 130
            LYR  H  D+
Sbjct: 1032 LYRWTHGRDA 1041


>ref|ZP_07793607.1| Resistance-Nodulation-Cell Division (RND) divalent metal cation
            efflux transporter CzcA [Pseudomonas aeruginosa 39016]
 gb|EFQ38703.1| Resistance-Nodulation-Cell Division (RND) divalent metal cation
            efflux transporter CzcA [Pseudomonas aeruginosa 39016]
 dbj|BAK90373.1| RND divalent metal cation efflux transporter [Pseudomonas aeruginosa
            NCGM2.S1]
          Length = 1051

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 120/130 (92%), Gaps = 2/130 (1%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            GIP  LTGGVLAL +RGIPLSISAAVGFIALSGVAVLNGLVMI+FIR L +EGRSLD A+
Sbjct: 912  GIPFALTGGVLALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLLQEGRSLDQAV 971

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
            +EGA+TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSST+LTLLVLP+
Sbjct: 972  WEGAITRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTMLTLLVLPV 1031

Query: 121  LYRLVHAGDS 130
            LYR  H  D+
Sbjct: 1032 LYRWTHGRDA 1041