BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0032.p (402 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001098784.1| oxidoreductase [Herminiimonas arsenicoxydans... 639 0.0 ref|YP_001352178.1| hypothetical protein mma_0488 [Janthinobacte... 624 e-177 ref|YP_003774291.1| hypotehtical protein [Herbaspirillum seroped... 624 e-176 ref|YP_004751684.1| NAD(FAD)-utilizing dehydrogenase [Collimonas... 616 e-174 ref|YP_001860114.1| hypothetical protein Bphy_3945 [Burkholderia... 518 e-144 >ref|YP_001098784.1| oxidoreductase [Herminiimonas arsenicoxydans] emb|CAL60655.1| conserved hypothetical protein; putative FAD/NAD(P)-binding domain [Herminiimonas arsenicoxydans] Length = 398 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 299/372 (80%), Positives = 335/372 (90%) Query: 30 GKSVVLIDHASKLAEKIRISGGGRCNFTNIGATPQNFLSQNPHFCKSALSRYTPQDFLAL 89 GKSVVLIDHA+KLAEKIRISGGGRCNFTNI ATPQNFLSQNPHFCKSALSRYTPQDFLAL Sbjct: 27 GKSVVLIDHAAKLAEKIRISGGGRCNFTNIDATPQNFLSQNPHFCKSALSRYTPQDFLAL 86 Query: 90 VKRYQISFHEKHKGQLFCSDSSEEIIAMLKAECDSGHVEWRMPCGVASVGKDGELFRLET 149 +KRY+I++HEKHKGQLFC D++E+II MLKAEC G+V WRMPC V ++ KDGELFR+ET Sbjct: 87 MKRYRIAYHEKHKGQLFCDDTAEDIINMLKAECALGNVAWRMPCNVKAINKDGELFRIET 146 Query: 150 DSGEILARHVVIATGGLSIPKIGATDFAYRIAKQFEVQLVETRPGLVPLTFDGAGWQPFV 209 D+G+ILA VVIATGGLSIPKIGATDFAYRIAKQF++++VE RP LVPLTFD WQPFV Sbjct: 147 DAGDILANSVVIATGGLSIPKIGATDFAYRIAKQFDLKMVEPRPALVPLTFDAESWQPFV 206 Query: 210 DLAGIALEVEVETGVKKERGYFLEDLLFTHRGLSGPAILQISSFWQQGASLTLNLLPQID 269 LAGIAL VEVETG KK RGYF EDLLFTHRGLSGPAILQISSFWQ GA L +NL+P++D Sbjct: 207 ALAGIALPVEVETGSKKARGYFKEDLLFTHRGLSGPAILQISSFWQPGAPLIINLVPEVD 266 Query: 270 VADTLIEGKTTLKKNLGNLLGQWLPARLADGLLKANGFDGTARIADMPDKQLRQVGEALN 329 +A+ LIEGK++ KKNLGN L QWLP+RLAD L NGF G AR+ADM DKQLRQ+G ++N Sbjct: 267 IAEALIEGKSSSKKNLGNQLAQWLPSRLADEWLIVNGFKGDARVADMQDKQLRQLGASIN 326 Query: 330 RWTIKPNGSEGYRKAEVTMGGIDTRELSQQSMMVNKVPGLHFIGEAVDVTGWLGGYNFQW 389 RW+I PNGSEGYRKAEVT+GGIDTRELSQQ+MMVNKVPGLHFIGE+VDVTGWLGGYNFQW Sbjct: 327 RWSIIPNGSEGYRKAEVTLGGIDTRELSQQTMMVNKVPGLHFIGESVDVTGWLGGYNFQW 386 Query: 390 AWASGVAAGQAI 401 AWASGVAAGQA+ Sbjct: 387 AWASGVAAGQAV 398 >ref|YP_001352178.1| hypothetical protein mma_0488 [Janthinobacterium sp. Marseille] gb|ABR89425.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 398 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 294/385 (76%), Positives = 336/385 (87%), Gaps = 3/385 (0%) Query: 17 IRCSSNRRRRFFXGKSVVLIDHASKLAEKIRISGGGRCNFTNIGATPQNFLSQNPHFCKS 76 + C+S +R GKSVVLIDHA+KLAEKIRISGGGRCNFTNI ATPQNFLSQNPHFCKS Sbjct: 17 MMCASVAGQR---GKSVVLIDHAAKLAEKIRISGGGRCNFTNIDATPQNFLSQNPHFCKS 73 Query: 77 ALSRYTPQDFLALVKRYQISFHEKHKGQLFCSDSSEEIIAMLKAECDSGHVEWRMPCGVA 136 ALSRYTPQDFLAL+KRY+I++HEKHKGQLFC +S+E+II MLKAEC G+V WRMPC V Sbjct: 74 ALSRYTPQDFLALMKRYRIAYHEKHKGQLFCDNSAEDIINMLKAECALGNVSWRMPCTVV 133 Query: 137 SVGKDGELFRLETDSGEILARHVVIATGGLSIPKIGATDFAYRIAKQFEVQLVETRPGLV 196 S+ K GE FR+ET++G+ILA +VIATGGLSIPKIGATDFAYRIAKQF+++++E RPGLV Sbjct: 134 SIAKSGEQFRIETNTGDILANSLVIATGGLSIPKIGATDFAYRIAKQFDLKMIEPRPGLV 193 Query: 197 PLTFDGAGWQPFVDLAGIALEVEVETGVKKERGYFLEDLLFTHRGLSGPAILQISSFWQQ 256 PLTFD WQPFV L+GIAL VEVETG KK RGYF EDLLFTHRGLSGPAILQISSFWQ Sbjct: 194 PLTFDANAWQPFVPLSGIALPVEVETGAKKTRGYFKEDLLFTHRGLSGPAILQISSFWQP 253 Query: 257 GASLTLNLLPQIDVADTLIEGKTTLKKNLGNLLGQWLPARLADGLLKANGFDGTARIADM 316 G LT+NL+P+ D+A+ LIEGK + KKNLGN L QWLP+RLAD L N F AR+ADM Sbjct: 254 GTPLTINLVPETDIAEALIEGKASSKKNLGNQLAQWLPSRLADEWLAVNDFKADARVADM 313 Query: 317 PDKQLRQVGEALNRWTIKPNGSEGYRKAEVTMGGIDTRELSQQSMMVNKVPGLHFIGEAV 376 DKQLR++G +LN+W+I PNGSEGYRKAEVT+GGIDTRELSQQ+MMV+KVPGLHFIGE+V Sbjct: 314 QDKQLRKLGASLNQWSIIPNGSEGYRKAEVTLGGIDTRELSQQTMMVSKVPGLHFIGESV 373 Query: 377 DVTGWLGGYNFQWAWASGVAAGQAI 401 DVTGWLGGYNFQWAWASGVAAGQA+ Sbjct: 374 DVTGWLGGYNFQWAWASGVAAGQAV 398 >ref|YP_003774291.1| hypotehtical protein [Herbaspirillum seropedicae SmR1] gb|ADJ62383.1| transmembrane protein (Predicted flavoprotein) [Herbaspirillum seropedicae SmR1] Length = 402 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 291/372 (78%), Positives = 331/372 (88%) Query: 30 GKSVVLIDHASKLAEKIRISGGGRCNFTNIGATPQNFLSQNPHFCKSALSRYTPQDFLAL 89 G+ VVLIDHA KLAEKIRISGGGRCNFTN+GA PQ++LSQNPHFC+SALSRYTPQDF+ L Sbjct: 31 GRRVVLIDHAGKLAEKIRISGGGRCNFTNVGAGPQHYLSQNPHFCRSALSRYTPQDFIGL 90 Query: 90 VKRYQISFHEKHKGQLFCSDSSEEIIAMLKAECDSGHVEWRMPCGVASVGKDGELFRLET 149 VKR++I FHEKHKGQLFC DS+E+IIAMLKAECD+G+V WRMPC V VGK E FR+ T Sbjct: 91 VKRHRIGFHEKHKGQLFCDDSAEDIIAMLKAECDAGNVSWRMPCTVQEVGKSSEHFRIAT 150 Query: 150 DSGEILARHVVIATGGLSIPKIGATDFAYRIAKQFEVQLVETRPGLVPLTFDGAGWQPFV 209 +GEI A +VIATGGLSIPKIGATDFAYRIA+QF+++LVETRPGLVPLTFDG WQ Sbjct: 151 SAGEIQAASLVIATGGLSIPKIGATDFAYRIARQFDLKLVETRPGLVPLTFDGKAWQSLT 210 Query: 210 DLAGIALEVEVETGVKKERGYFLEDLLFTHRGLSGPAILQISSFWQQGASLTLNLLPQID 269 +LAGIALEVEVETG KKERG+FLEDLLFTHRGLSGPAILQISS+W+ G LTLNLLPQ+D Sbjct: 211 ELAGIALEVEVETGAKKERGHFLEDLLFTHRGLSGPAILQISSYWKPGTPLTLNLLPQLD 270 Query: 270 VADTLIEGKTTLKKNLGNLLGQWLPARLADGLLKANGFDGTARIADMPDKQLRQVGEALN 329 VA+TLI+GK T+KKNLGN+L QWLP RLA+G LK NGFD RIADMPDK L+++G++LN Sbjct: 271 VAETLIDGKGTIKKNLGNILAQWLPNRLAEGWLKINGFDAGGRIADMPDKSLKKLGDSLN 330 Query: 330 RWTIKPNGSEGYRKAEVTMGGIDTRELSQQSMMVNKVPGLHFIGEAVDVTGWLGGYNFQW 389 RW I P+GSEGYRKAEVT+GG+DTRELSQQ+MM NKVPGLH IGEA+DVTGWLGGYNFQW Sbjct: 331 RWVILPSGSEGYRKAEVTLGGVDTRELSQQTMMANKVPGLHVIGEAMDVTGWLGGYNFQW 390 Query: 390 AWASGVAAGQAI 401 AWASGVAAG A+ Sbjct: 391 AWASGVAAGSAV 402 >ref|YP_004751684.1| NAD(FAD)-utilizing dehydrogenase [Collimonas fungivorans Ter331] gb|AEK60861.1| NAD(FAD)-utilizing dehydrogenase [Collimonas fungivorans Ter331] Length = 398 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 289/372 (77%), Positives = 328/372 (88%) Query: 30 GKSVVLIDHASKLAEKIRISGGGRCNFTNIGATPQNFLSQNPHFCKSALSRYTPQDFLAL 89 GK VVLIDHA+KLAEKIRISGGGRCNFTNI A PQNFLSQNPHFCKSALSRYTPQDFL+L Sbjct: 27 GKKVVLIDHATKLAEKIRISGGGRCNFTNINAGPQNFLSQNPHFCKSALSRYTPQDFLSL 86 Query: 90 VKRYQISFHEKHKGQLFCSDSSEEIIAMLKAECDSGHVEWRMPCGVASVGKDGELFRLET 149 VKRY+I++HEKHKGQLFC DSSE+IIAMLKAEC+ G+V WRMPC VA +GK G+LFR+++ Sbjct: 87 VKRYRIAYHEKHKGQLFCDDSSEQIIAMLKAECELGNVSWRMPCSVADIGKSGDLFRIDS 146 Query: 150 DSGEILARHVVIATGGLSIPKIGATDFAYRIAKQFEVQLVETRPGLVPLTFDGAGWQPFV 209 +GEILA +VVIATGGLSIPKIGATDFAYRIA+QF ++++E +PGLVPLTFD A WQPF+ Sbjct: 147 SAGEILASNVVIATGGLSIPKIGATDFAYRIARQFGMRMIEPQPGLVPLTFDAAAWQPFL 206 Query: 210 DLAGIALEVEVETGVKKERGYFLEDLLFTHRGLSGPAILQISSFWQQGASLTLNLLPQID 269 LAGIAL VEVETG KK RG F EDLLFTHRGLSGPAILQISSFW+ GASL LNLLP ID Sbjct: 207 PLAGIALPVEVETGDKKNRGEFKEDLLFTHRGLSGPAILQISSFWKSGASLQLNLLPDID 266 Query: 270 VADTLIEGKTTLKKNLGNLLGQWLPARLADGLLKANGFDGTARIADMPDKQLRQVGEALN 329 V TL++GKT++KKNLGNL QWLPARLA G+++AN D AR+AD PD+ LR++G A+N Sbjct: 267 VTQTLLDGKTSIKKNLGNLFAQWLPARLAHGIIEANRLDPAARLADTPDRVLRELGNAVN 326 Query: 330 RWTIKPNGSEGYRKAEVTMGGIDTRELSQQSMMVNKVPGLHFIGEAVDVTGWLGGYNFQW 389 RW I+PNGSEGYRKAEVT+GGIDTRELSQQSMM N+ GL+FIGEAVDVTGWLGGYNFQW Sbjct: 327 RWAIQPNGSEGYRKAEVTLGGIDTRELSQQSMMSNRTTGLYFIGEAVDVTGWLGGYNFQW 386 Query: 390 AWASGVAAGQAI 401 AWAS A G AI Sbjct: 387 AWASATATGFAI 398 >ref|YP_001860114.1| hypothetical protein Bphy_3945 [Burkholderia phymatum STM815] gb|ACC73068.1| HI0933 family protein [Burkholderia phymatum STM815] Length = 405 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 239/372 (64%), Positives = 301/372 (80%), Gaps = 1/372 (0%) Query: 30 GKSVVLIDHASKLAEKIRISGGGRCNFTNIGATPQNFLSQNPHFCKSALSRYTPQDFLAL 89 G+ VVLIDHA++LAEKIRISGGGRCNFTN+ A P N+LS NPHFC+SAL+RYTP+DF+AL Sbjct: 26 GRRVVLIDHAARLAEKIRISGGGRCNFTNLYAGPANYLSANPHFCRSALARYTPRDFMAL 85 Query: 90 VKRYQISFHEKHKGQLFCSDSSEEIIAMLKAECDSGHVEWRMPCGVASVGK-DGELFRLE 148 +K+Y++++HEKHKGQLFC SS+ +I +LK+ECD+G++ WR P V V + + + F L+ Sbjct: 86 LKQYRVTWHEKHKGQLFCDQSSDAVIDVLKSECDAGNIAWRRPLAVEQVRRSESDGFVLD 145 Query: 149 TDSGEILARHVVIATGGLSIPKIGATDFAYRIAKQFEVQLVETRPGLVPLTFDGAGWQPF 208 T +G I A +VIATGGLSIPKIGATDFAYR+AKQF +L++TRP LVPLTF A WQPF Sbjct: 146 TQAGPIRAHALVIATGGLSIPKIGATDFAYRVAKQFGHKLIDTRPALVPLTFASADWQPF 205 Query: 209 VDLAGIALEVEVETGVKKERGYFLEDLLFTHRGLSGPAILQISSFWQQGASLTLNLLPQI 268 +L+G++LEV + TG KK G F+EDLL THRGLSGP +LQISS+WQ G + +NLLP+ Sbjct: 206 SELSGVSLEVHLATGAKKTGGEFVEDLLLTHRGLSGPGVLQISSYWQPGEPVHINLLPEQ 265 Query: 269 DVADTLIEGKTTLKKNLGNLLGQWLPARLADGLLKANGFDGTARIADMPDKQLRQVGEAL 328 L+E K+ K+ +G+LL +W+P RLA L+ +G AR+AD+PDK LR+VGEAL Sbjct: 266 HAVAALLEAKSATKRQIGSLLAEWVPTRLAHVWLQTHGVSADARLADLPDKALRRVGEAL 325 Query: 329 NRWTIKPNGSEGYRKAEVTMGGIDTRELSQQSMMVNKVPGLHFIGEAVDVTGWLGGYNFQ 388 +RWT+ PNG+EGYRKAEVT GG+DTRELS +MM +VPGL+FIGEAVDVTGWLGGYNFQ Sbjct: 326 SRWTLTPNGTEGYRKAEVTRGGVDTRELSSATMMSARVPGLYFIGEAVDVTGWLGGYNFQ 385 Query: 389 WAWASGVAAGQA 400 WAWASGVAAGQA Sbjct: 386 WAWASGVAAGQA 397