BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0009.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774275.1| site specific integrase/recombinase [Herbasp... 517 e-144 ref|YP_001352164.1| integrase/recombinase [Janthinobacterium sp.... 516 e-144 ref|YP_001098767.1| site-specific tyrosine recombinase [Herminii... 512 e-143 ref|YP_004754211.1| site-specific tyrosine recombinase [Collimon... 509 e-142 ref|ZP_08274277.1| site-specific tyrosine recombinase [Oxalobact... 487 e-135 >ref|YP_003774275.1| site specific integrase/recombinase [Herbaspirillum seropedicae SmR1] gb|ADJ62367.1| site specific integrase/recombinase protein [Herbaspirillum seropedicae SmR1] Length = 307 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 250/302 (82%), Positives = 270/302 (89%) Query: 22 PKVQATGASLAAIDEFCDTLWLEDGLAKNSLEAYRRDMTLFAHWLQTERRKDLLATQAED 81 PK++A S AIDEFCD+LWLEDGL+KN+LEAYRRDMT +AHWL ER K L TQAED Sbjct: 6 PKIEAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTRYAHWLYQERAKALYETQAED 65 Query: 82 LNAYFAARHADTKASSSNRRLAVLKRFFLLALRQNRISEDPCLRLRSAKQPPRFPKVLSE 141 LNAYFAARH TK SSSNRRLAVLKRFF LALRQ+ ++ DPCL+LRSA+QP RFPK LSE Sbjct: 66 LNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSE 125 Query: 142 GQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVSELVLLKSVEVGMNEGVLRITGKGNK 201 GQVEALLAAPDV+TPLGLRDR M+ELMYASGLRVSELVLLKS+EVGMNEGVLR+TGKG+K Sbjct: 126 GQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSK 185 Query: 202 TRLVPFGEEARSWIERYLREARLLILEGQVDDALFVTARGGAMTRQMFWTLIKKYALQGD 261 TRLVPFGEEA SW+ RYL EAR IL+GQVDDALFVTARGG MTRQMFWTLIKKYALQ Sbjct: 186 TRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAG 245 Query: 262 IRAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKKLHAEHHP 321 + A LSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLK+LHA HHP Sbjct: 246 VTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHP 305 Query: 322 RG 323 RG Sbjct: 306 RG 307 >ref|YP_001352164.1| integrase/recombinase [Janthinobacterium sp. Marseille] gb|ABR89571.1| integrase/recombinase [Janthinobacterium sp. Marseille] Length = 301 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 249/294 (84%), Positives = 265/294 (90%) Query: 30 SLAAIDEFCDTLWLEDGLAKNSLEAYRRDMTLFAHWLQTERRKDLLATQAEDLNAYFAAR 89 S + IDEFCDTLWLEDGLAKNSLEAYRRD+ LFA WLQ ER K LLA EDLN YF A+ Sbjct: 8 SQSEIDEFCDTLWLEDGLAKNSLEAYRRDLRLFATWLQQERGKSLLAAHTEDLNGYFFAK 67 Query: 90 HADTKASSSNRRLAVLKRFFLLALRQNRISEDPCLRLRSAKQPPRFPKVLSEGQVEALLA 149 HA TKA+SSNRRLAVLKRF+ LALRQN+I +DPCLRLRSAKQPPR PK LSE QVEALLA Sbjct: 68 HATTKATSSNRRLAVLKRFYQLALRQNKIKDDPCLRLRSAKQPPRMPKTLSEAQVEALLA 127 Query: 150 APDVTTPLGLRDRTMLELMYASGLRVSELVLLKSVEVGMNEGVLRITGKGNKTRLVPFGE 209 APDV TPLGLRDRTMLELMYASGLRV+ELVLLKSVEVGMNEGVLR+TGKG KTRL+PFGE Sbjct: 128 APDVNTPLGLRDRTMLELMYASGLRVTELVLLKSVEVGMNEGVLRVTGKGGKTRLIPFGE 187 Query: 210 EARSWIERYLREARLLILEGQVDDALFVTARGGAMTRQMFWTLIKKYALQGDIRAPLSPH 269 EAR+WIERYL+EAR IL GQ+DDALFVTARGGAMTRQMFWTLIKK+A DI APLSPH Sbjct: 188 EARAWIERYLKEARGAILNGQMDDALFVTARGGAMTRQMFWTLIKKHAAAADINAPLSPH 247 Query: 270 TLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKKLHAEHHPRG 323 TLRHAFATHLLNHGADLRVVQLLLGH+DISTTQIYTHVARERLK+LH HHPRG Sbjct: 248 TLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKRLHQMHHPRG 301 >ref|YP_001098767.1| site-specific tyrosine recombinase [Herminiimonas arsenicoxydans] emb|CAL60638.1| tyrosine recombinase XerD [Herminiimonas arsenicoxydans] Length = 309 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 249/294 (84%), Positives = 266/294 (90%) Query: 30 SLAAIDEFCDTLWLEDGLAKNSLEAYRRDMTLFAHWLQTERRKDLLATQAEDLNAYFAAR 89 S A IDEFCDTLWLEDGLAKNSLEAYRRD+ LFA WLQ ER K LLA A+D+NAYF AR Sbjct: 16 SQAQIDEFCDTLWLEDGLAKNSLEAYRRDLRLFAVWLQAERGKTLLAAHADDVNAYFFAR 75 Query: 90 HADTKASSSNRRLAVLKRFFLLALRQNRISEDPCLRLRSAKQPPRFPKVLSEGQVEALLA 149 H TKA+SSNRRLAVLKRF+ LALRQNRIS+DPCL++RSAKQP R PK LSE QVEALLA Sbjct: 76 HEVTKATSSNRRLAVLKRFYQLALRQNRISDDPCLKMRSAKQPLRIPKTLSEAQVEALLA 135 Query: 150 APDVTTPLGLRDRTMLELMYASGLRVSELVLLKSVEVGMNEGVLRITGKGNKTRLVPFGE 209 APDVTTPLGLRDRTMLELMYASGLRV+ELVLLKS+EVGMNEGVLRITGKG KTRLVPFGE Sbjct: 136 APDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMNEGVLRITGKGGKTRLVPFGE 195 Query: 210 EARSWIERYLREARLLILEGQVDDALFVTARGGAMTRQMFWTLIKKYALQGDIRAPLSPH 269 EAR WIERYL+EAR LIL+GQ+DDALFVTARG AMTRQMFWTLIKK+A +I APLSPH Sbjct: 196 EARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWTLIKKHAAAAEINAPLSPH 255 Query: 270 TLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKKLHAEHHPRG 323 TLRHAFATHLLNHGADLRVVQ+LLGH+DISTTQIYTHVARERLK LH HHPRG Sbjct: 256 TLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLKHLHQIHHPRG 309 >ref|YP_004754211.1| site-specific tyrosine recombinase [Collimonas fungivorans Ter331] gb|AEK63388.1| site-specific tyrosine recombinase [Collimonas fungivorans Ter331] Length = 312 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 254/311 (81%), Positives = 269/311 (86%), Gaps = 1/311 (0%) Query: 14 RKSVAGRAPKVQATGASLAAIDEFCDTLWLEDGLAKNSLEAYRRDMTLFAHWLQTERR-K 72 R+S A K + AIDEFCD LWLEDGLAKNSLEAYRRDMTLFA WLQ + K Sbjct: 2 RRSKAQSEAKPALSAEHQTAIDEFCDNLWLEDGLAKNSLEAYRRDMTLFALWLQEQPDGK 61 Query: 73 DLLATQAEDLNAYFAARHADTKASSSNRRLAVLKRFFLLALRQNRISEDPCLRLRSAKQP 132 L A A DLNAYF ARH +KA+SSNRRLAVLKRF+LLALRQNRIS DPCL LRSAKQ Sbjct: 62 SLFAVHAGDLNAYFLARHDSSKATSSNRRLAVLKRFYLLALRQNRISADPCLHLRSAKQA 121 Query: 133 PRFPKVLSEGQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVSELVLLKSVEVGMNEGV 192 PRFPK+LSE QVEALLAAPDV TPLGLRDRTMLELMYASGLRVSELVLLKS+EVGMNEGV Sbjct: 122 PRFPKILSEIQVEALLAAPDVATPLGLRDRTMLELMYASGLRVSELVLLKSLEVGMNEGV 181 Query: 193 LRITGKGNKTRLVPFGEEARSWIERYLREARLLILEGQVDDALFVTARGGAMTRQMFWTL 252 LRITGKGNKTRL+PFGEEAR+WI RYL++AR I+ GQ+DDALFVTARGGAMTRQMFWTL Sbjct: 182 LRITGKGNKTRLLPFGEEARNWIVRYLKDARGQIMNGQMDDALFVTARGGAMTRQMFWTL 241 Query: 253 IKKYALQGDIRAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERL 312 IKKYA + I APLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERL Sbjct: 242 IKKYAAKAAINAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERL 301 Query: 313 KKLHAEHHPRG 323 K LHA HHPRG Sbjct: 302 KALHAAHHPRG 312 >ref|ZP_08274277.1| site-specific tyrosine recombinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32250.1| site-specific tyrosine recombinase [Oxalobacteraceae bacterium IMCC9480] Length = 304 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/290 (80%), Positives = 257/290 (88%) Query: 34 IDEFCDTLWLEDGLAKNSLEAYRRDMTLFAHWLQTERRKDLLATQAEDLNAYFAARHADT 93 ID FCDTLWLEDGLAKNSLEAYRRD+T FA WL + LLA D+NAYFAARH + Sbjct: 15 IDTFCDTLWLEDGLAKNSLEAYRRDLTAFALWLAQASQTGLLAVTGADINAYFAARHDAS 74 Query: 94 KASSSNRRLAVLKRFFLLALRQNRISEDPCLRLRSAKQPPRFPKVLSEGQVEALLAAPDV 153 KA+++NRRLAVLKRF+ LALR +IS+DPCL+L SAKQPPRFPK LSE VEALLAAPDV Sbjct: 75 KATTANRRLAVLKRFYQLALRNKQISDDPCLKLHSAKQPPRFPKTLSEANVEALLAAPDV 134 Query: 154 TTPLGLRDRTMLELMYASGLRVSELVLLKSVEVGMNEGVLRITGKGNKTRLVPFGEEARS 213 +TPLGLRDRTMLELMYASGLRV+ELVLLKS+E+ +N+GV+R+TGKGNKTRLVPFGEEARS Sbjct: 135 STPLGLRDRTMLELMYASGLRVTELVLLKSIELSLNDGVVRVTGKGNKTRLVPFGEEARS 194 Query: 214 WIERYLREARLLILEGQVDDALFVTARGGAMTRQMFWTLIKKYALQGDIRAPLSPHTLRH 273 WIERYL EAR IL+GQ+DDALFVTARGG MTRQMFW ++KK A++ DI APLSPHTLRH Sbjct: 195 WIERYLLEARAQILDGQMDDALFVTARGGPMTRQMFWVVVKKCAVRADIHAPLSPHTLRH 254 Query: 274 AFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKKLHAEHHPRG 323 AFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLK LHA HHPRG Sbjct: 255 AFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKVLHAAHHPRG 304