BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0149.p         (167 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002538131.1| conserved hypothetical protein [Ricinus comm...   179   2e-43
ref|YP_003774842.1| hypothetical protein Hsero_1418 [Herbaspiril...   167   5e-40
ref|ZP_08503809.1| hypothetical protein METUNv1_00820 [Methylove...    81   5e-14
ref|YP_004848275.1| hypothetical protein NH8B_3075 [Pseudogulben...    80   1e-13
ref|ZP_03700246.1| conserved hypothetical protein [Lutiella nitr...    80   1e-13

>ref|XP_002538131.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF24253.1| conserved hypothetical protein [Ricinus communis]
          Length = 173

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/156 (64%), Positives = 107/156 (68%), Gaps = 29/156 (18%)

Query: 12  SHGVKLIAMLAL----SFSLSACDYVASFTKPKQTPEEAKAEGIALGAGCRQAGQSLEDC 67
           S   +L+A LAL    SFSLSACDY++SF+KPKQTPEEAKAEGIALGAGCRQAGQSLEDC
Sbjct: 6   SQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQSLEDC 65

Query: 68  YQRNPDKLKAGIFAGWKDMHEYMAAKNIPTVVPPPVPEKTEADTAKDKEAPKDDRAARRE 127
           YQRNPD LKAGIFAGWKDMHEYMAAK I TV PP  P    AD AKD             
Sbjct: 66  YQRNPDALKAGIFAGWKDMHEYMAAKGIQTVTPPTPP----ADAAKD------------- 108

Query: 128 RREREKAEQDGKDGKDSKSKDGGGDSDRSSR-RNRD 162
                  +  GKDGKDSK      DSDRS+R R RD
Sbjct: 109 -------DAKGKDGKDSKDAKDSKDSDRSNRARERD 137


>ref|YP_003774842.1| hypothetical protein Hsero_1418 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62934.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 176

 Score =  167 bits (423), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 85/113 (75%), Positives = 90/113 (79%), Gaps = 8/113 (7%)

Query: 12  SHGVKLIAMLAL----SFSLSACDYVASFTKPKQTPEEAKAEGIALGAGCRQAGQSLEDC 67
           S   +L+A LAL    SFSLSACDY++SF+KPKQTPEEAKAEGIALGAGCRQAGQSLEDC
Sbjct: 6   SQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQSLEDC 65

Query: 68  YQRNPDKLKAGIFAGWKDMHEYMAAKNIPTVVPPPVPEKTEADTAKDKEAPKD 120
           YQRNPD LKAGIFAGWKDMHEYMAAK I TV PP  P    AD AKD    KD
Sbjct: 66  YQRNPDALKAGIFAGWKDMHEYMAAKGIQTVTPPTPP----ADAAKDDAKGKD 114


>ref|ZP_08503809.1| hypothetical protein METUNv1_00820 [Methyloversatilis universalis
           FAM5]
 gb|EGK72985.1| hypothetical protein METUNv1_00820 [Methyloversatilis universalis
           FAM5]
          Length = 126

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 12/121 (9%)

Query: 21  LALSFSLSACDYVASFTKPKQTPEEAKAEGIALGAGCRQAGQSLEDCYQRNPDKLKAGIF 80
           +A + +L+ACD +     P +   + + +  A+G  CR AG++LEDCY  NP   KA IF
Sbjct: 1   MACALTLAACDRL-PIPDPNKAAAQKELDAKAIGGACRHAGRALEDCYNLNPKASKAAIF 59

Query: 81  AGWKDMHEYMAAKNIPTV---VPPPV--------PEKTEADTAKDKEAPKDDRAARRERR 129
           AGW++M++YM    I  V   VPPP         P   E DTA D   PK+   +  + R
Sbjct: 60  AGWREMNDYMTQNKIEVVLPTVPPPAATTRKVKGPSAAEHDTAADDTPPKETHGSAHDGR 119

Query: 130 E 130
            
Sbjct: 120 N 120


>ref|YP_004848275.1| hypothetical protein NH8B_3075 [Pseudogulbenkiania sp. NH8B]
 dbj|BAK77861.1| hypothetical protein NH8B_3075 [Pseudogulbenkiania sp. NH8B]
          Length = 177

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 41/50 (82%)

Query: 52  ALGAGCRQAGQSLEDCYQRNPDKLKAGIFAGWKDMHEYMAAKNIPTVVPP 101
           A+GA CRQ+G+SLE+CYQRNPD  KA I+AGW++MHEYM  + + T+ PP
Sbjct: 32  AVGAACRQSGRSLEECYQRNPDADKAQIYAGWREMHEYMVKQKLDTIAPP 81


>ref|ZP_03700246.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
 gb|EEG06846.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
          Length = 177

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 2/64 (3%)

Query: 52  ALGAGCRQAGQSLEDCYQRNPDKLKAGIFAGWKDMHEYMAAKNIPTVVPP--PVPEKTEA 109
           A+GA CRQ+G+SLE+CYQRNPD  KA I+AGW++MHEYM  + + T+ PP  PV   T A
Sbjct: 32  AVGAACRQSGRSLEECYQRNPDADKAQIYAGWREMHEYMVKQKLDTIAPPSDPVAPVTPA 91

Query: 110 DTAK 113
              K
Sbjct: 92  AAHK 95