BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0126.p         (286 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFW85236.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas ...   326   3e-87
gb|EFW80946.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas ...   325   4e-87
gb|EGH85522.1| 2-keto-3-deoxy-galactonokinase [Pseudomonas syrin...   324   8e-87
ref|YP_274180.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomona...   323   2e-86
ref|ZP_06478005.1| 2-keto-3-deoxy-galactonokinase [Pseudomonas s...   322   3e-86

>gb|EFW85236.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gb|EGH15014.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 334

 Score =  326 bits (835), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 212/321 (66%), Gaps = 43/321 (13%)

Query: 7   RLIALDWGTTSLRAYRLGEDGAVLDKRGLPWGIMNLP----VVEGDFSRAAGFAKAFDEA 62
           +LIALDWGTTSLRAYRLGE G VL++R L  GIM LP    ++ G F  + GF  AFD+A
Sbjct: 4   QLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFC-SDGFELAFDQA 62

Query: 63  CGDWLQSDPATPLIAAGMVGSAQGWREASYVEIPLAVTDIGKQLTHVDLGAGRTLHIVPG 122
           CGDWL + P  P+IA GMVGSAQGWREA+Y E P +V ++   L  V    G T+HI+PG
Sbjct: 63  CGDWLDAQPDLPVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSMRGVTVHIIPG 122

Query: 123 LLQRAALPNVIRGEETQVVGAL---DTWQGGDEVLIGLPGTHSKWVRVQNRIITHFDTFM 179
           +LQR+ LPNV+RGEETQV+G L   + WQG   +LIGLPG+HSKWV+V+   I HFDTFM
Sbjct: 123 VLQRSTLPNVMRGEETQVLGVLAGREDWQGSQPLLIGLPGSHSKWVQVERGRIVHFDTFM 182

Query: 180 TGEVYAALSQHTILGRTMEHREQGDPAAFEHGLRVASSEDGRAGVLSNIFSSRTLGLVGQ 239
           TGEVYAAL  HTILGRTM+  E  D  AF+ GL +A S+ G AG LS IFS+RTLGL GQ
Sbjct: 183 TGEVYAALCAHTILGRTMQPSEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLTGQ 242

Query: 240 LDATGQPDYLSGLLIGHEIAAL-----------------------------------KAT 264
           L A+ QPDYLSGLLIGHE+ A+                                      
Sbjct: 243 LAASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGV 302

Query: 265 DIAAQATERGLWKIARQAGLL 285
            +A QATERGLW++A QAGL+
Sbjct: 303 TLAEQATERGLWQVAVQAGLI 323


>gb|EFW80946.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 334

 Score =  325 bits (834), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 212/321 (66%), Gaps = 43/321 (13%)

Query: 7   RLIALDWGTTSLRAYRLGEDGAVLDKRGLPWGIMNLP----VVEGDFSRAAGFAKAFDEA 62
           +LIALDWGTTSLRAYRLGE G VL++R L  GIM LP    ++ G F  + GF  AFD+A
Sbjct: 4   QLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFC-SDGFELAFDQA 62

Query: 63  CGDWLQSDPATPLIAAGMVGSAQGWREASYVEIPLAVTDIGKQLTHVDLGAGRTLHIVPG 122
           CGDWL + P  P+IA GMVGSAQGWREA+Y E P +V ++   L  V    G T+HI+PG
Sbjct: 63  CGDWLDAQPDLPVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHIIPG 122

Query: 123 LLQRAALPNVIRGEETQVVGAL---DTWQGGDEVLIGLPGTHSKWVRVQNRIITHFDTFM 179
           +LQR+ LPNV+RGEETQV+G L   + WQG   +LIGLPG+HSKWV+V+   I HFDTFM
Sbjct: 123 VLQRSTLPNVMRGEETQVLGVLAGREDWQGSQPLLIGLPGSHSKWVQVERGRIVHFDTFM 182

Query: 180 TGEVYAALSQHTILGRTMEHREQGDPAAFEHGLRVASSEDGRAGVLSNIFSSRTLGLVGQ 239
           TGEVYAAL  HTILGRTM+  E  D  AF+ GL +A S+ G AG LS IFS+RTLGL GQ
Sbjct: 183 TGEVYAALCAHTILGRTMQPSEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLTGQ 242

Query: 240 LDATGQPDYLSGLLIGHEIAAL-----------------------------------KAT 264
           L A+ QPDYLSGLLIGHE+ A+                                      
Sbjct: 243 LAASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGV 302

Query: 265 DIAAQATERGLWKIARQAGLL 285
            +A QATERGLW++A QAGL+
Sbjct: 303 TLAEQATERGLWQVAVQAGLI 323


>gb|EGH85522.1| 2-keto-3-deoxy-galactonokinase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 334

 Score =  324 bits (831), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 211/321 (65%), Gaps = 43/321 (13%)

Query: 7   RLIALDWGTTSLRAYRLGEDGAVLDKRGLPWGIMNLP----VVEGDFSRAAGFAKAFDEA 62
           +LIALDWGTTSLRAYRLGE G VL++R L  GIM LP    ++ G F  + GF  AFD+A
Sbjct: 4   QLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFC-SDGFELAFDQA 62

Query: 63  CGDWLQSDPATPLIAAGMVGSAQGWREASYVEIPLAVTDIGKQLTHVDLGAGRTLHIVPG 122
           CGDWL + P  P+IA GMVGSAQGWREA+Y E P +V ++   L  V    G T+HI+PG
Sbjct: 63  CGDWLDAQPDLPVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSARGVTVHIIPG 122

Query: 123 LLQRAALPNVIRGEETQVVGAL---DTWQGGDEVLIGLPGTHSKWVRVQNRIITHFDTFM 179
           +LQR+ LPNV+RGEETQV+G L   D  QG  ++LIGLPG+HSKWV+V+   I HFDTFM
Sbjct: 123 VLQRSTLPNVMRGEETQVLGVLAGLDAGQGSQQLLIGLPGSHSKWVQVERGRIVHFDTFM 182

Query: 180 TGEVYAALSQHTILGRTMEHREQGDPAAFEHGLRVASSEDGRAGVLSNIFSSRTLGLVGQ 239
           TGEVYAAL  HTILGRTM+  E  D  AF+ GL +A S+ G  G LS IFS+RTLGL GQ
Sbjct: 183 TGEVYAALCAHTILGRTMQPSEAFDEQAFDRGLSIALSDAGSVGPLSTIFSTRTLGLTGQ 242

Query: 240 LDATGQPDYLSGLLIGHEIAAL-----------------------------------KAT 264
           L A+ QPDYLSGLLIGHE+ A+                                      
Sbjct: 243 LAASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGV 302

Query: 265 DIAAQATERGLWKIARQAGLL 285
            +A QATERGLW++A QAGL+
Sbjct: 303 TLAEQATERGLWQVAVQAGLI 323


>ref|YP_274180.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gb|AAZ35156.1| 2-dehydro-3-deoxygalactonate kinase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 334

 Score =  323 bits (827), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 211/321 (65%), Gaps = 43/321 (13%)

Query: 7   RLIALDWGTTSLRAYRLGEDGAVLDKRGLPWGIMNLP----VVEGDFSRAAGFAKAFDEA 62
           +LIALDWGTTSLRAYRLGE G VL++R L  GIM LP    ++ G F  + GF  AFD+A
Sbjct: 4   QLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFC-SDGFELAFDQA 62

Query: 63  CGDWLQSDPATPLIAAGMVGSAQGWREASYVEIPLAVTDIGKQLTHVDLGAGRTLHIVPG 122
           CGDWL + P  P+IA GMVGSAQGWREA+Y E P +V ++   L  V    G T+HI+PG
Sbjct: 63  CGDWLDAQPDLPVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHIIPG 122

Query: 123 LLQRAALPNVIRGEETQVVGAL---DTWQGGDEVLIGLPGTHSKWVRVQNRIITHFDTFM 179
           +LQR+ LPNV+RGEETQV+G L   + WQG   +LIGLPG+HSKWV+V+   I HFDTFM
Sbjct: 123 VLQRSTLPNVMRGEETQVLGVLAGREDWQGSQPLLIGLPGSHSKWVQVERGRIVHFDTFM 182

Query: 180 TGEVYAALSQHTILGRTMEHREQGDPAAFEHGLRVASSEDGRAGVLSNIFSSRTLGLVGQ 239
           TGEVYAAL  HTILGRTM+  E  D  AF+ GL +A S+ G A  LS IFS+RTLGL GQ
Sbjct: 183 TGEVYAALCAHTILGRTMQPSEAFDEQAFDRGLSIALSDAGSAVPLSTIFSTRTLGLTGQ 242

Query: 240 LDATGQPDYLSGLLIGHEIAAL-----------------------------------KAT 264
           L A+ QPDYLSGLLIGHE+ A+                                      
Sbjct: 243 LAASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGV 302

Query: 265 DIAAQATERGLWKIARQAGLL 285
            +A QATERGLW++A QAGL+
Sbjct: 303 TLAEQATERGLWQVAVQAGLI 323


>ref|ZP_06478005.1| 2-keto-3-deoxy-galactonokinase [Pseudomonas syringae pv. aesculi
           str. 2250]
 ref|ZP_07004556.1| 2-dehydro-3-deoxygalactonokinase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gb|EFI00034.1| 2-dehydro-3-deoxygalactonokinase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 334

 Score =  322 bits (826), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 211/321 (65%), Gaps = 43/321 (13%)

Query: 7   RLIALDWGTTSLRAYRLGEDGAVLDKRGLPWGIMNLP----VVEGDFSRAAGFAKAFDEA 62
           +LIALDWGTTSLRAYRLGE G VL++R L  GIM LP    ++ G F  + GF  AFD+A
Sbjct: 4   QLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFC-SDGFELAFDQA 62

Query: 63  CGDWLQSDPATPLIAAGMVGSAQGWREASYVEIPLAVTDIGKQLTHVDLGAGRTLHIVPG 122
           CGDWL + P  P+IA GMVGSAQGWREA+Y E P +V ++   L  V    G T+HI+PG
Sbjct: 63  CGDWLDAQPDLPVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHIIPG 122

Query: 123 LLQRAALPNVIRGEETQVVGAL---DTWQGGDEVLIGLPGTHSKWVRVQNRIITHFDTFM 179
           +LQR+ LPNV+RGEETQV+G L   D  Q   ++LIGLPG+HSKWV+V+   I HFDTFM
Sbjct: 123 VLQRSTLPNVMRGEETQVLGVLAGLDAGQSSQQLLIGLPGSHSKWVQVERGRIVHFDTFM 182

Query: 180 TGEVYAALSQHTILGRTMEHREQGDPAAFEHGLRVASSEDGRAGVLSNIFSSRTLGLVGQ 239
           TGEVYAAL  HTILGRTM+  E  D  AF+ GL +A S+ G AG LS IFS+RTLGL GQ
Sbjct: 183 TGEVYAALCAHTILGRTMQPSEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLTGQ 242

Query: 240 LDATGQPDYLSGLLIGHEIAAL-----------------------------------KAT 264
           L A+ QPDYLSGLLIGHE+ A+                                      
Sbjct: 243 LAASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGV 302

Query: 265 DIAAQATERGLWKIARQAGLL 285
            +A QATERGLW++A QAGL+
Sbjct: 303 TLAEQATERGLWQVAVQAGLI 323