BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0120.p         (211 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352542.1| oligoribonuclease [Janthinobacterium sp. Mar...   355   2e-96
ref|YP_004753875.1| oligoribonuclease [Collimonas fungivorans Te...   353   9e-96
ref|ZP_08276114.1| Oligoribonuclease [Oxalobacteraceae bacterium...   347   5e-94
ref|YP_001099190.1| oligoribonuclease [Herminiimonas arsenicoxyd...   346   1e-93
ref|YP_003774858.1| oligoribonuclease [Herbaspirillum seropedica...   338   3e-91

>ref|YP_001352542.1| oligoribonuclease [Janthinobacterium sp. Marseille]
 gb|ABR89573.1| oligoribonuclease protein [Janthinobacterium sp. Marseille]
          Length = 195

 Score =  355 bits (911), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 165/196 (84%), Positives = 178/196 (90%), Gaps = 1/196 (0%)

Query: 16  MSQATDTNAAPYAIPARPNEFNLIWVDMEMTGLDPDNDRIIEVAVVVTDPELNVLAEGPV 75
           MSQAT+  ++  A P RPNEFNL+WVDMEMTGLDPD DRIIEVAVVVTD  LN+L EGPV
Sbjct: 1   MSQATELESSS-AAPIRPNEFNLVWVDMEMTGLDPDKDRIIEVAVVVTDANLNILGEGPV 59

Query: 76  FAIHQSDEILDGMDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVPVGKSPMC 135
           FAIHQSDE+LDGMDAWNKGTHGRSGLI+R+KASTVTE EA  ALI FLK +VP GKSPMC
Sbjct: 60  FAIHQSDEVLDGMDAWNKGTHGRSGLIDRIKASTVTEAEAETALIEFLKKYVPSGKSPMC 119

Query: 136 GNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHTALADII 195
           GN+ICQDRRFM RGMPKLEAFFHYRNLDVSTLKELCRRWKPEL +GFKKHQKHTALADI+
Sbjct: 120 GNTICQDRRFMVRGMPKLEAFFHYRNLDVSTLKELCRRWKPELVNGFKKHQKHTALADIL 179

Query: 196 ESIEELKYYREHFIKE 211
           ESIEEL+YYREHFIKE
Sbjct: 180 ESIEELRYYREHFIKE 195


>ref|YP_004753875.1| oligoribonuclease [Collimonas fungivorans Ter331]
 gb|AEK63052.1| Oligoribonuclease [Collimonas fungivorans Ter331]
          Length = 202

 Score =  353 bits (906), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 170/202 (84%), Positives = 181/202 (89%), Gaps = 6/202 (2%)

Query: 16  MSQATDTNAAPYAIP------ARPNEFNLIWVDMEMTGLDPDNDRIIEVAVVVTDPELNV 69
           MSQA D + A  A         RPNEFNLIWVDMEMTGL+PD+DRIIEVAVVVTDP+LN+
Sbjct: 1   MSQAADVSTAIAATTAIPAAPVRPNEFNLIWVDMEMTGLNPDSDRIIEVAVVVTDPQLNI 60

Query: 70  LAEGPVFAIHQSDEILDGMDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVPV 129
           LAEGPVFAIHQ+DEI+DGMDAWNKGTHGRSGLIE+VK STVTE EA  ALI FLK +VP 
Sbjct: 61  LAEGPVFAIHQADEIMDGMDAWNKGTHGRSGLIEKVKNSTVTESEAELALIEFLKKYVPN 120

Query: 130 GKSPMCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHT 189
           GKSPMCGN+ICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHT
Sbjct: 121 GKSPMCGNTICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHT 180

Query: 190 ALADIIESIEELKYYREHFIKE 211
           ALADIIESIEEL+YYREHFIKE
Sbjct: 181 ALADIIESIEELRYYREHFIKE 202


>ref|ZP_08276114.1| Oligoribonuclease [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30416.1| Oligoribonuclease [Oxalobacteraceae bacterium IMCC9480]
          Length = 201

 Score =  347 bits (891), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 164/200 (82%), Positives = 176/200 (88%), Gaps = 5/200 (2%)

Query: 16  MSQATDTNAAP-----YAIPARPNEFNLIWVDMEMTGLDPDNDRIIEVAVVVTDPELNVL 70
           MSQ T+   AP      A P R NEFNL+W+DMEMTGLDP+ DRIIEVAVVVTD  LN+L
Sbjct: 1   MSQPTEPQTAPEIATAIATPLRTNEFNLVWLDMEMTGLDPETDRIIEVAVVVTDSNLNIL 60

Query: 71  AEGPVFAIHQSDEILDGMDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVPVG 130
            +GPVFAIHQSD  LDGMD WNKGTHGRSGLIERVKASTVTE +A AALIAFLK +VP G
Sbjct: 61  GQGPVFAIHQSDAALDGMDNWNKGTHGRSGLIERVKASTVTEADAEAALIAFLKDYVPAG 120

Query: 131 KSPMCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHTA 190
           KSPMCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELC+RW+PELASGFKKHQKHTA
Sbjct: 121 KSPMCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCKRWRPELASGFKKHQKHTA 180

Query: 191 LADIIESIEELKYYREHFIK 210
           LADIIESIEEL+YYREHFI+
Sbjct: 181 LADIIESIEELRYYREHFIQ 200


>ref|YP_001099190.1| oligoribonuclease [Herminiimonas arsenicoxydans]
 emb|CAL61063.1| oligoribonuclease [Herminiimonas arsenicoxydans]
          Length = 198

 Score =  346 bits (887), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 163/198 (82%), Positives = 175/198 (88%), Gaps = 2/198 (1%)

Query: 16  MSQATDT--NAAPYAIPARPNEFNLIWVDMEMTGLDPDNDRIIEVAVVVTDPELNVLAEG 73
           MSQA +   +  P   P RPNEFNL+W+DMEMTGLD DND IIE+AVVVTD ELN++ EG
Sbjct: 1   MSQAAEVIPSVTPSTAPVRPNEFNLVWLDMEMTGLDCDNDCIIEIAVVVTDAELNIIGEG 60

Query: 74  PVFAIHQSDEILDGMDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVPVGKSP 133
           PVFAIHQSDE LD MDAWNKGTHGRSGLIERVKASTV+E +A   LI FLK +VP GKSP
Sbjct: 61  PVFAIHQSDETLDKMDAWNKGTHGRSGLIERVKASTVSEAQAEEELIEFLKKYVPKGKSP 120

Query: 134 MCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHTALAD 193
           MCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELC+RWKPELASGFKKHQKHTALAD
Sbjct: 121 MCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCKRWKPELASGFKKHQKHTALAD 180

Query: 194 IIESIEELKYYREHFIKE 211
           IIESIEEL+YYREHFIKE
Sbjct: 181 IIESIEELRYYREHFIKE 198


>ref|YP_003774858.1| oligoribonuclease [Herbaspirillum seropedicae SmR1]
 gb|ADJ62950.1| oligoribonuclease (3'->5' exoribonuclease) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 189

 Score =  338 bits (867), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 157/184 (85%), Positives = 166/184 (90%)

Query: 28  AIPARPNEFNLIWVDMEMTGLDPDNDRIIEVAVVVTDPELNVLAEGPVFAIHQSDEILDG 87
           A P RPNE NLIWVDMEMTGLDPD DRIIEVAVVVTD ELNVL EGPV AIHQSDE+LDG
Sbjct: 6   AAPVRPNEMNLIWVDMEMTGLDPDKDRIIEVAVVVTDAELNVLGEGPVLAIHQSDELLDG 65

Query: 88  MDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVPVGKSPMCGNSICQDRRFMA 147
           MDAWNKGTHGRSGLI+RVKASTVTE +A   +I FLK +VP GKSPMCGNSICQDRRFM 
Sbjct: 66  MDAWNKGTHGRSGLIDRVKASTVTEADAEKQIIEFLKQYVPAGKSPMCGNSICQDRRFMV 125

Query: 148 RGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKHQKHTALADIIESIEELKYYREH 207
           RGMPKLE FFHYRNLDVSTLKELC+RWKPE+A+GFKK Q HTALADI+ESIEELKYYREH
Sbjct: 126 RGMPKLEEFFHYRNLDVSTLKELCKRWKPEIATGFKKRQMHTALADILESIEELKYYREH 185

Query: 208 FIKE 211
           FIKE
Sbjct: 186 FIKE 189