BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0111.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002006740.1| oligopeptide transporter (ABC superfamily, A... 320 1e-85 ref|YP_004687022.1| oligopeptide transport ATP-binding protein A... 315 4e-84 ref|YP_727736.1| ABC transporter ATPase [Ralstonia eutropha H16]... 315 4e-84 ref|YP_297206.1| oligopeptide/dipeptide ABC transporter, ATP-bin... 311 5e-83 ref|YP_004754643.1| oligopeptide/dipeptide ABC transporter ATP-b... 308 4e-82 >ref|YP_002006740.1| oligopeptide transporter (ABC superfamily, ATP_bind) [Cupriavidus taiwanensis LMG 19424] emb|CAQ70679.1| oligopeptide transport protein (ABC superfamily, atp_bind) [Cupriavidus taiwanensis LMG 19424] Length = 353 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 164/218 (75%), Positives = 180/218 (82%), Gaps = 4/218 (1%) Query: 2 NQGHDTMPPLLELRHVSKRFVKPLDSAARTSNLITRPFGRVLHEEVVHAVDDVSLHINAG 61 +G P+LELR VSKRFVK LD+AAR +NL FG EEVVHAVD V L I AG Sbjct: 17 QEGATPAAPILELRGVSKRFVKSLDAAARIANL----FGAHAREEVVHAVDRVDLSIRAG 72 Query: 62 EVVGLVGESGCGKSTLGRMAVGLHGLTEGRRLWRGEDLDALSPQQRRERQLAIQMIFQDP 121 EVVGLVGESGCGKSTLGRMAVGLH LTEG RLWRG +LD L P +RRE+QLAIQMIFQDP Sbjct: 73 EVVGLVGESGCGKSTLGRMAVGLHSLTEGERLWRGTNLDRLPPDKRREKQLAIQMIFQDP 132 Query: 122 YASLNPRLRVVDIVGEAPVVHGITGRREQQDYVADLLQRVGLSGDMLRRFPHQFSGGQRA 181 YASLNPRLRV+DIVGEAPVVHG+ GR EQ+ YV D+L RVG+ +LRRFPHQFSGGQRA Sbjct: 133 YASLNPRLRVLDIVGEAPVVHGLIGRGEQKGYVEDMLVRVGMDPTVLRRFPHQFSGGQRA 192 Query: 182 RVGIARALAVKPKFLVCDEAVAALDVSIQAQVLNXHSR 219 R+GIARALAVKP+FLVCDE+VAALDVSIQAQVLN R Sbjct: 193 RIGIARALAVKPEFLVCDESVAALDVSIQAQVLNLFMR 230 >ref|YP_004687022.1| oligopeptide transport ATP-binding protein AppF [Cupriavidus necator N-1] gb|AEI78541.1| oligopeptide transport ATP-binding protein AppF [Cupriavidus necator N-1] Length = 353 Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 161/218 (73%), Positives = 178/218 (81%), Gaps = 4/218 (1%) Query: 2 NQGHDTMPPLLELRHVSKRFVKPLDSAARTSNLITRPFGRVLHEEVVHAVDDVSLHINAG 61 +G P+LELR VSKRFVK LD+AAR +NL FG H+EVVHAVD V L I AG Sbjct: 17 EEGATPSAPILELRGVSKRFVKSLDAAARIANL----FGAHAHDEVVHAVDRVDLSIRAG 72 Query: 62 EVVGLVGESGCGKSTLGRMAVGLHGLTEGRRLWRGEDLDALSPQQRRERQLAIQMIFQDP 121 EVVGLVGESGCGKSTLGRMAVGLH LTEG R WRG +LD L P +RRE+QLAIQMIFQDP Sbjct: 73 EVVGLVGESGCGKSTLGRMAVGLHSLTEGERFWRGTNLDHLPPDKRREKQLAIQMIFQDP 132 Query: 122 YASLNPRLRVVDIVGEAPVVHGITGRREQQDYVADLLQRVGLSGDMLRRFPHQFSGGQRA 181 YASLNPRLRV+DIVGEAPVVHG+ R Q+ YV D+L RVG+ +LRRFPHQFSGGQRA Sbjct: 133 YASLNPRLRVLDIVGEAPVVHGMVERGAQKGYVEDMLVRVGMDPTVLRRFPHQFSGGQRA 192 Query: 182 RVGIARALAVKPKFLVCDEAVAALDVSIQAQVLNXHSR 219 R+GIARALAVKP+FLVCDE+VAALDVSIQAQVLN R Sbjct: 193 RIGIARALAVKPEFLVCDESVAALDVSIQAQVLNLFMR 230 >ref|YP_727736.1| ABC transporter ATPase [Ralstonia eutropha H16] emb|CAJ94368.1| ABC-type transporter, ATPase component: PepT family [Ralstonia eutropha H16] Length = 353 Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 162/218 (74%), Positives = 179/218 (82%), Gaps = 4/218 (1%) Query: 2 NQGHDTMPPLLELRHVSKRFVKPLDSAARTSNLITRPFGRVLHEEVVHAVDDVSLHINAG 61 +G P+LELR VSKRFVK LD+AAR +NL FG H+EVVHAVD V L I AG Sbjct: 17 EEGGTPSAPILELRGVSKRFVKSLDTAARIANL----FGAHAHDEVVHAVDRVDLSIRAG 72 Query: 62 EVVGLVGESGCGKSTLGRMAVGLHGLTEGRRLWRGEDLDALSPQQRRERQLAIQMIFQDP 121 EVVGLVGESGCGKSTLGRMAVGLH LTEG RLWRG +LD L P +RRE+QLAIQMIFQDP Sbjct: 73 EVVGLVGESGCGKSTLGRMAVGLHSLTEGERLWRGINLDHLPPDKRREKQLAIQMIFQDP 132 Query: 122 YASLNPRLRVVDIVGEAPVVHGITGRREQQDYVADLLQRVGLSGDMLRRFPHQFSGGQRA 181 YASLNPRLRV+DIVGEAPVVHG+ R Q+ YV D+L RVG+ +LRRFPHQFSGGQRA Sbjct: 133 YASLNPRLRVLDIVGEAPVVHGMVERGAQKGYVEDMLVRVGMDPTVLRRFPHQFSGGQRA 192 Query: 182 RVGIARALAVKPKFLVCDEAVAALDVSIQAQVLNXHSR 219 R+GIARALAVKP+FLVCDE+VAALDVSIQAQVLN R Sbjct: 193 RIGIARALAVKPEFLVCDESVAALDVSIQAQVLNLFMR 230 >ref|YP_297206.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal [Ralstonia eutropha JMP134] gb|AAZ62362.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal [Ralstonia eutropha JMP134] Length = 352 Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 158/206 (76%), Positives = 174/206 (84%), Gaps = 4/206 (1%) Query: 10 PLLELRHVSKRFVKPLDSAARTSNLITRPFGRVLHEEVVHAVDDVSLHINAGEVVGLVGE 69 PLLELR VSKRFVK LD+AAR +NL FG EEVVHAVD V L I GEVVGLVGE Sbjct: 24 PLLELRGVSKRFVKSLDTAARIANL----FGAHAREEVVHAVDRVDLSIRTGEVVGLVGE 79 Query: 70 SGCGKSTLGRMAVGLHGLTEGRRLWRGEDLDALSPQQRRERQLAIQMIFQDPYASLNPRL 129 SGCGKSTLGRMAVGLH L+EG R WRG +LD L ++RRE+QLAIQMIFQDPYASLNPRL Sbjct: 80 SGCGKSTLGRMAVGLHTLSEGERFWRGTNLDHLPLEKRREKQLAIQMIFQDPYASLNPRL 139 Query: 130 RVVDIVGEAPVVHGITGRREQQDYVADLLQRVGLSGDMLRRFPHQFSGGQRARVGIARAL 189 RV+DIVGEAPVVHG+ R EQ+ YV D+L RVG+ +LRRFPHQFSGGQRAR+GIARAL Sbjct: 140 RVIDIVGEAPVVHGMIARGEQKAYVEDMLVRVGMDPTVLRRFPHQFSGGQRARIGIARAL 199 Query: 190 AVKPKFLVCDEAVAALDVSIQAQVLN 215 AVKP+FLVCDE+VAALDVSIQAQVLN Sbjct: 200 AVKPEFLVCDESVAALDVSIQAQVLN 225 >ref|YP_004754643.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein [Collimonas fungivorans Ter331] gb|AAT42420.1| ABC-type oligopeptide transport system, ATPase component [Collimonas fungivorans Ter331] gb|AEK63820.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein [Collimonas fungivorans Ter331] Length = 346 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 160/216 (74%), Positives = 179/216 (82%), Gaps = 9/216 (4%) Query: 5 HDTMPP-----LLELRHVSKRFVKPLDSAARTSNLITRPFGRVLHEEVVHAVDDVSLHIN 59 ++T PP LLEL+ VSKRFVK LDSAAR +NL FG + +EVVHAVD VSL I Sbjct: 7 NNTAPPPSAPNLLELQAVSKRFVKTLDSAARIANL----FGAGMQQEVVHAVDQVSLGIR 62 Query: 60 AGEVVGLVGESGCGKSTLGRMAVGLHGLTEGRRLWRGEDLDALSPQQRRERQLAIQMIFQ 119 GEVVGLVGESGCGKSTLGRMAVGLH LT G RLW+G+ L+ L +RR++QLAIQMIFQ Sbjct: 63 RGEVVGLVGESGCGKSTLGRMAVGLHSLTAGTRLWKGQSLEQLDAAERRKKQLAIQMIFQ 122 Query: 120 DPYASLNPRLRVVDIVGEAPVVHGITGRREQQDYVADLLQRVGLSGDMLRRFPHQFSGGQ 179 DPYASLNPR+RV DIVGEAP+VHG+ +Q++YV LLQRVGL G MLRRFPHQFSGGQ Sbjct: 123 DPYASLNPRMRVQDIVGEAPLVHGLVDGPQQREYVESLLQRVGLDGAMLRRFPHQFSGGQ 182 Query: 180 RARVGIARALAVKPKFLVCDEAVAALDVSIQAQVLN 215 RARVGIARALAVKP+FLVCDEAVAALDVSIQAQVLN Sbjct: 183 RARVGIARALAVKPEFLVCDEAVAALDVSIQAQVLN 218