BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0110.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754644.1| oligopeptide/dipeptide ABC transporter ATP-b... 478 e-133 ref|YP_549344.1| oligopeptide/dipeptide ABC transporter ATP-bind... 461 e-128 ref|ZP_08272556.1| Oligopeptide transport ATP-binding protein op... 457 e-127 ref|YP_001101519.1| oligopeptide ABC transporter ATP-binding pro... 437 e-121 ref|ZP_00945757.1| DppD [Ralstonia solanacearum UW551] >gi|20774... 426 e-117 >ref|YP_004754644.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein [Collimonas fungivorans Ter331] gb|AAT42419.1| ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Collimonas fungivorans Ter331] gb|AEK63821.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein [Collimonas fungivorans Ter331] Length = 327 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/275 (83%), Positives = 244/275 (88%) Query: 1 MTGYSIMGLIDEPGKVAGGRILLNGRDLRSLPAEDMRRIRGNRIAMIFQDPMMTLNPVLR 60 MTGYSIMGL+D PGK+ G ILL G+DLRSLP E MR+IRGNRIAMIFQDPMMTLNPVLR Sbjct: 49 MTGYSIMGLVDAPGKIVAGEILLQGQDLRSLPPEAMRKIRGNRIAMIFQDPMMTLNPVLR 108 Query: 61 IDTQMIEAVRAHQDVSKDAALAMAREALVRVGIAAPDERLNAYPHQFSGGMRQRVAIAIA 120 IDTQM+EAVRAHQDVS+ A M+REALVRVGI APDERL AYPHQFSGGMRQRVAIAIA Sbjct: 109 IDTQMMEAVRAHQDVSRMVAREMSREALVRVGIPAPDERLQAYPHQFSGGMRQRVAIAIA 168 Query: 121 LLNKPDLIICDEPTTALDVTIQGQILFEMQKLCRESGTALIWITHDLSVVAGLADTVSVM 180 LLN+PDLIICDEPTTALDVTIQGQIL+EMQKLCRESGTALIWITHDLSVVAGLADTVSVM Sbjct: 169 LLNQPDLIICDEPTTALDVTIQGQILYEMQKLCRESGTALIWITHDLSVVAGLADTVSVM 228 Query: 181 YAGRIVESGEVAQVLTRPRHPYTHGLIASAPSRNPRGQALRQIPGSTPSLLKLPSGCAFR 240 YAGRIVESG V QVL PRHPYTHGLIASAPSRNPRGQ L+QIPG TPSLL LP GCAFR Sbjct: 229 YAGRIVESGTVQQVLEHPRHPYTHGLIASAPSRNPRGQPLQQIPGMTPSLLNLPEGCAFR 288 Query: 241 DRCAHAAIECTQTPETRIVDGRALRCFHPMADEFA 275 RCAHA +EC QTP+ R V+ R LRC+HP+ D A Sbjct: 289 TRCAHATVECRQTPQLREVEQRMLRCYHPLRDSLA 323 >ref|YP_549344.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein [Polaromonas sp. JS666] gb|ABE44446.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein [Polaromonas sp. JS666] Length = 344 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/275 (81%), Positives = 240/275 (87%) Query: 1 MTGYSIMGLIDEPGKVAGGRILLNGRDLRSLPAEDMRRIRGNRIAMIFQDPMMTLNPVLR 60 MTGYSIMGLID PG+V G ILL GR+LR LP E+MR++RG+RIAMIFQDPMMTLNPVLR Sbjct: 64 MTGYSIMGLIDSPGRVVEGSILLQGRELRGLPPEEMRQVRGDRIAMIFQDPMMTLNPVLR 123 Query: 61 IDTQMIEAVRAHQDVSKDAALAMAREALVRVGIAAPDERLNAYPHQFSGGMRQRVAIAIA 120 IDTQM+EAV AH VSKD A AMAR+AL RVGI++PDERL AYPHQFSGGMRQRVAIAIA Sbjct: 124 IDTQMMEAVLAHHAVSKDTARAMARDALARVGISSPDERLLAYPHQFSGGMRQRVAIAIA 183 Query: 121 LLNKPDLIICDEPTTALDVTIQGQILFEMQKLCRESGTALIWITHDLSVVAGLADTVSVM 180 LLNKPDLIICDEPTTALDVTIQGQIL+EMQKLCRESGTALIWITHDLSVVAGLADTV VM Sbjct: 184 LLNKPDLIICDEPTTALDVTIQGQILYEMQKLCRESGTALIWITHDLSVVAGLADTVCVM 243 Query: 181 YAGRIVESGEVAQVLTRPRHPYTHGLIASAPSRNPRGQALRQIPGSTPSLLKLPSGCAFR 240 Y G+IVESG V QVL RPRHPYTHGLIASAPSRNPRGQ LRQIPG TPSLL LP+GCAFR Sbjct: 244 YVGKIVESGTVEQVLDRPRHPYTHGLIASAPSRNPRGQPLRQIPGMTPSLLNLPTGCAFR 303 Query: 241 DRCAHAAIECTQTPETRIVDGRALRCFHPMADEFA 275 +RC A+ CT P I DGRALRCFHP+ + A Sbjct: 304 ERCDRASAACTIQPALEIFDGRALRCFHPVTEAVA 338 >ref|ZP_08272556.1| Oligopeptide transport ATP-binding protein oppD [Oxalobacteraceae bacterium IMCC9480] gb|EGF33981.1| Oligopeptide transport ATP-binding protein oppD [Oxalobacteraceae bacterium IMCC9480] Length = 331 Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust. Identities = 221/272 (81%), Positives = 239/272 (87%) Query: 1 MTGYSIMGLIDEPGKVAGGRILLNGRDLRSLPAEDMRRIRGNRIAMIFQDPMMTLNPVLR 60 MTGYSIMGLID PGKV G ILL GR+LR +PA+ MR+IRG+RIAMIFQDPMMTLNPVLR Sbjct: 54 MTGYSIMGLIDHPGKVTEGSILLQGRELRGIPADAMRKIRGDRIAMIFQDPMMTLNPVLR 113 Query: 61 IDTQMIEAVRAHQDVSKDAALAMAREALVRVGIAAPDERLNAYPHQFSGGMRQRVAIAIA 120 IDTQM+EAV AH DVSKD A AM+R+AL RVGI +PDERL AYPHQFSGGMRQRVAIAIA Sbjct: 114 IDTQMMEAVLAHHDVSKDTARAMSRDALARVGIPSPDERLLAYPHQFSGGMRQRVAIAIA 173 Query: 121 LLNKPDLIICDEPTTALDVTIQGQILFEMQKLCRESGTALIWITHDLSVVAGLADTVSVM 180 LLNKPDLIICDEPTTALDVTIQGQIL+EMQKLCRESGTALIWITHDLSVVAGLADTV VM Sbjct: 174 LLNKPDLIICDEPTTALDVTIQGQILYEMQKLCRESGTALIWITHDLSVVAGLADTVCVM 233 Query: 181 YAGRIVESGEVAQVLTRPRHPYTHGLIASAPSRNPRGQALRQIPGSTPSLLKLPSGCAFR 240 YAG+IVESG V QVL +PRHPYTHGLIASAPSRNPRGQ LRQIPG TPSLL LP GCAFR Sbjct: 234 YAGKIVESGTVRQVLEQPRHPYTHGLIASAPSRNPRGQPLRQIPGMTPSLLNLPGGCAFR 293 Query: 241 DRCAHAAIECTQTPETRIVDGRALRCFHPMAD 272 +RC A+ C ++P DGRALRCFHP+ + Sbjct: 294 ERCDRASAACAESPPLEHADGRALRCFHPIIE 325 >ref|YP_001101519.1| oligopeptide ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] emb|CAL63398.1| Dipeptide transport ATP-binding protein DppD [Herminiimonas arsenicoxydans] Length = 321 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 214/271 (78%), Positives = 230/271 (84%) Query: 1 MTGYSIMGLIDEPGKVAGGRILLNGRDLRSLPAEDMRRIRGNRIAMIFQDPMMTLNPVLR 60 MT YSIMGLID PGK+ G+ILL +DLR+L E MRRIRGNRIAMIFQDPMMTLNPVLR Sbjct: 43 MTAYSIMGLIDAPGKIVAGKILLKDQDLRALSPEAMRRIRGNRIAMIFQDPMMTLNPVLR 102 Query: 61 IDTQMIEAVRAHQDVSKDAALAMAREALVRVGIAAPDERLNAYPHQFSGGMRQRVAIAIA 120 IDTQM+EAV AHQDV K A AMAR+ALVRVGIA+PDERL AYPHQFSGGMRQRVAIAIA Sbjct: 103 IDTQMMEAVLAHQDVGKATARAMARDALVRVGIASPDERLLAYPHQFSGGMRQRVAIAIA 162 Query: 121 LLNKPDLIICDEPTTALDVTIQGQILFEMQKLCRESGTALIWITHDLSVVAGLADTVSVM 180 LLNKPDLIICDEPTTALDVTIQGQIL+EMQKLCRESGTALIWITHDLSV+AGLAD V VM Sbjct: 163 LLNKPDLIICDEPTTALDVTIQGQILYEMQKLCRESGTALIWITHDLSVIAGLADAVCVM 222 Query: 181 YAGRIVESGEVAQVLTRPRHPYTHGLIASAPSRNPRGQALRQIPGSTPSLLKLPSGCAFR 240 YAG+IVESG V +VL +P+HPYTHGLIAS+PSRN G LRQIPG TPSLL LPSGCAFR Sbjct: 223 YAGKIVESGSVQEVLEQPQHPYTHGLIASSPSRNLPGLPLRQIPGMTPSLLNLPSGCAFR 282 Query: 241 DRCAHAAIECTQTPETRIVDGRALRCFHPMA 271 RC A C TP I R LRCFHP++ Sbjct: 283 TRCERATAVCENTPPLSIDGARTLRCFHPIS 313 >ref|ZP_00945757.1| DppD [Ralstonia solanacearum UW551] ref|YP_002260817.1| oligopeptide atp-binding protein [Ralstonia solanacearum IPO1609] gb|EAP71726.1| DppD [Ralstonia solanacearum UW551] emb|CAQ17273.1| oligopeptide atp-binding protein [Ralstonia solanacearum MolK2] emb|CAQ62757.1| oligopeptide atp-binding protein [Ralstonia solanacearum IPO1609] Length = 339 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 217/276 (78%), Positives = 229/276 (82%), Gaps = 6/276 (2%) Query: 1 MTGYSIMGLIDEPGKVAGGRILLNGRD-----LRSLPAEDMRRIRGNRIAMIFQDPMMTL 55 MTGYSIMGLID PG+V GGRI L GRD LR+LPA MR +RGNRIAMIFQDPMMTL Sbjct: 55 MTGYSIMGLIDPPGRVVGGRIELTGRDGVTRDLRTLPAGQMRDMRGNRIAMIFQDPMMTL 114 Query: 56 NPVLRIDTQMIEAVRAHQDVSKDAALAMAREALVRVGIAAPDERLNAYPHQFSGGMRQRV 115 NPVLR+DTQMIEAV AHQ VS+ A MAR AL +VGI +P+ERL AYPHQFSGGMRQRV Sbjct: 115 NPVLRVDTQMIEAVLAHQRVSRRQAREMARAALAKVGIPSPEERLQAYPHQFSGGMRQRV 174 Query: 116 AIAIALLNKPDLIICDEPTTALDVTIQGQILFEMQKLCRESGTALIWITHDLSVVAGLAD 175 AIAIALLNKPDLII DEPTTALDVTIQGQIL E+Q LCRESGTALIWITHDLSVVAGLAD Sbjct: 175 AIAIALLNKPDLIIADEPTTALDVTIQGQILAEVQTLCRESGTALIWITHDLSVVAGLAD 234 Query: 176 TVSVMYAGRIVESGEVAQVLTRPRHPYTHGLIASAPSRNPRGQALRQIPGSTPSLLKLPS 235 TV VMYAGRIVE G V QVL PRHPYT GLIASAPSRNPRG LRQIPG TPSLL LP Sbjct: 235 TVCVMYAGRIVEQGSVQQVLETPRHPYTFGLIASAPSRNPRGVPLRQIPGMTPSLLALPG 294 Query: 236 GCAFRDRCAHAAIECTQTPETR-IVDGRALRCFHPM 270 GCAFR+RCA A C QTP + DGRALRCFHP+ Sbjct: 295 GCAFRERCAFATEVCKQTPGLEPLDDGRALRCFHPV 330