BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0104.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777255.1| hypothetical protein Hsero_3869 [Herbaspiril... 348 4e-94 ref|YP_001098577.1| hypothetical protein HEAR0219 [Herminiimonas... 263 2e-68 ref|YP_001351962.1| hypothetical protein mma_0272 [Janthinobacte... 256 2e-66 ref|YP_001862436.1| hypothetical protein Bphy_6359 [Burkholderia... 208 6e-52 ref|YP_299743.1| hypothetical protein Reut_B5554 [Ralstonia eutr... 205 8e-51 >ref|YP_003777255.1| hypothetical protein Hsero_3869 [Herbaspirillum seropedicae SmR1] gb|ADJ65347.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 287 Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 209/264 (79%), Gaps = 9/264 (3%) Query: 4 VVTSSLPSSLRLAMLAGMVAILAACANTQKVHDPV------AKQVKLDQALALFSSNPAQ 57 + +S + L A +AG A+LA C+ Q P+ AKQ +LDQALALFSSNPA Sbjct: 18 LASSCMRHILGAACVAG-AALLAGCSAQQPA--PLDASARQAKQARLDQALALFSSNPAG 74 Query: 58 GLPKEWEPLSFMRKKKATEYGLVRDGDRTVLRAFADKASSGLRHEVNIDPVKQPWLSWSW 117 GLP WEPL+F RKK TEY L+ + R+VL A+AD+ASSGLRH V+ID K+PWLSWSW Sbjct: 75 GLPAGWEPLTFTRKKIPTEYRLIDENGRSVLHAWADRASSGLRHPVDIDINKKPWLSWSW 134 Query: 118 KTSALIKTADNRFRDTEDSPVRIVLAFDGDKNKLSFMDTILFDTAKLLSGHDFPYATLMY 177 KT+ LI TAD R+R+T+DSPVRIVLAFDGD +KLS MDTILFDTAKLL+GH+ PYATLMY Sbjct: 135 KTAGLIPTADLRYRETDDSPVRIVLAFDGDHDKLSLMDTILFDTAKLLTGHELPYATLMY 194 Query: 178 IWENKAPKESVIANTRTGRIQMLVAESGAANVGQWVSYQRNIVDDYVKVYGEQPGRLIGV 237 +W++KA +VIAN RTGRIQM+VAESG A+VGQW YQRN+ +DY +++GE+PGRL+GV Sbjct: 195 VWDSKAEVGTVIANGRTGRIQMMVAESGPAHVGQWRRYQRNVAEDYERIFGEKPGRLVGV 254 Query: 238 GVLTDTDNTEGKVEAWYGDIRLLR 261 GVLTDTDNT K+EAWYGDIRL+R Sbjct: 255 GVLTDTDNTSQKMEAWYGDIRLMR 278 >ref|YP_001098577.1| hypothetical protein HEAR0219 [Herminiimonas arsenicoxydans] emb|CAL60448.1| conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 262 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/242 (52%), Positives = 167/242 (69%) Query: 21 MVAILAACANTQKVHDPVAKQVKLDQALALFSSNPAQGLPKEWEPLSFMRKKKATEYGLV 80 ++ LA CA ++ + D +A FS + GLP WEP+ R KK T Y LV Sbjct: 20 LLLFLAGCAQVRQPAGARQGETIADIRIAPFSESALGGLPNRWEPMIIHRNKKNTHYALV 79 Query: 81 RDGDRTVLRAFADKASSGLRHEVNIDPVKQPWLSWSWKTSALIKTADNRFRDTEDSPVRI 140 + R VL A A ASSGL +VNIDP+++P +SW W+ S L++TADN R EDSP RI Sbjct: 80 AEHGRHVLHARAVSASSGLMQKVNIDPMQKPQISWRWRISGLVETADNFDRALEDSPARI 139 Query: 141 VLAFDGDKNKLSFMDTILFDTAKLLSGHDFPYATLMYIWENKAPKESVIANTRTGRIQML 200 +L FDG+K++L F D I+F+TA++++G + PYATLMYIW +AP ++VI NTR+ RI+M+ Sbjct: 140 ILGFDGNKDELPFTDQIMFETARMVTGRELPYATLMYIWGRRAPVDTVIPNTRSNRIKMI 199 Query: 201 VAESGAANVGQWVSYQRNIVDDYVKVYGEQPGRLIGVGVLTDTDNTEGKVEAWYGDIRLL 260 VA SG VG+W + R+IV DY + +GE+PGRLIGVGVLTDTDNT VEAWYGDIRL Sbjct: 200 VAASGEDGVGEWQAIARDIVADYERAFGEKPGRLIGVGVLTDTDNTGETVEAWYGDIRLK 259 Query: 261 RQ 262 +Q Sbjct: 260 QQ 261 >ref|YP_001351962.1| hypothetical protein mma_0272 [Janthinobacterium sp. Marseille] gb|ABR90996.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 258 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 121/209 (57%), Positives = 153/209 (73%) Query: 51 FSSNPAQGLPKEWEPLSFMRKKKATEYGLVRDGDRTVLRAFADKASSGLRHEVNIDPVKQ 110 FS N + GLP+ WEP+ R KK TEY LV D +TVL A A A+SGL +V+IDP+ Sbjct: 37 FSVNASGGLPERWEPMIINRTKKLTEYKLVDDDGKTVLHARAVAAASGLMQKVDIDPLLG 96 Query: 111 PWLSWSWKTSALIKTADNRFRDTEDSPVRIVLAFDGDKNKLSFMDTILFDTAKLLSGHDF 170 L+W W+ S L++TA+N R EDSP RI+L FDGDK+ L F D I+F+TA+L++G D Sbjct: 97 SQLNWRWRISGLVQTANNSERGLEDSPARIILGFDGDKDSLPFADQIMFETARLMTGRDV 156 Query: 171 PYATLMYIWENKAPKESVIANTRTGRIQMLVAESGAANVGQWVSYQRNIVDDYVKVYGEQ 230 PYATLMYIW KAP +++I NTR+ R++M+VAE+GA+ VG W S+ RNI DY K +GE+ Sbjct: 157 PYATLMYIWGRKAPVDTIITNTRSNRVKMIVAETGASGVGDWHSFSRNIAADYEKAFGEK 216 Query: 231 PGRLIGVGVLTDTDNTEGKVEAWYGDIRL 259 PGRLI VGVLTDTDNT VEAWYGDI L Sbjct: 217 PGRLIAVGVLTDTDNTGETVEAWYGDIGL 245 >ref|YP_001862436.1| hypothetical protein Bphy_6359 [Burkholderia phymatum STM815] gb|ACC75390.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 256 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 101/214 (47%), Positives = 131/214 (61%) Query: 47 ALALFSSNPAQGLPKEWEPLSFMRKKKATEYGLVRDGDRTVLRAFADKASSGLRHEVNID 106 +A + P LP W+ L + K T Y LV+DG VL+A A++++S L H+ NID Sbjct: 40 GIAFSTMEPGASLPATWKNLPVAKGKAITHYTLVKDGQTIVLQADANRSASALMHDGNID 99 Query: 107 PVKQPWLSWSWKTSALIKTADNRFRDTEDSPVRIVLAFDGDKNKLSFMDTILFDTAKLLS 166 + P ++W WK I+ ADNR ED+P R+V AFDGDK+KLS D D AK + Sbjct: 100 LSRTPVVTWRWKADKPIEDADNRVGSKEDAPARLVFAFDGDKSKLSMFDRAKMDLAKSIG 159 Query: 167 GHDFPYATLMYIWENKAPKESVIANTRTGRIQMLVAESGAANVGQWVSYQRNIVDDYVKV 226 G + PYATLMY+W A + IAN T R+QM+V + GQW S +RNIV DY KV Sbjct: 160 GQELPYATLMYVWSANAAPGTAIANPHTKRVQMIVLSGQPGDAGQWQSLRRNIVKDYEKV 219 Query: 227 YGEQPGRLIGVGVLTDTDNTEGKVEAWYGDIRLL 260 + E PGR+ G G+LTDTDNT +V AWYGDI L Sbjct: 220 FHEPPGRITGYGLLTDTDNTGAEVRAWYGDIEFL 253 >ref|YP_299743.1| hypothetical protein Reut_B5554 [Ralstonia eutropha JMP134] gb|AAZ64899.1| hypothetical protein Reut_B5554 [Ralstonia eutropha JMP134] Length = 256 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 135/223 (60%), Gaps = 1/223 (0%) Query: 39 AKQVKLDQALALFSS-NPAQGLPKEWEPLSFMRKKKATEYGLVRDGDRTVLRAFADKASS 97 A+ + DQ FS+ P LP +W+ L + K T Y LV DG+ TVL+A A++++S Sbjct: 31 AQSAQGDQPGIAFSALRPGAQLPADWKNLPVVHGKAMTRYTLVADGNTTVLQADANRSAS 90 Query: 98 GLRHEVNIDPVKQPWLSWSWKTSALIKTADNRFRDTEDSPVRIVLAFDGDKNKLSFMDTI 157 L HE NID + P+++W WK A ++ ADN ED+P R+V FDGDK+KLSF D Sbjct: 91 ALMHEGNIDLDRTPFVAWRWKAQAPVEGADNSEGAKEDAPARLVFFFDGDKDKLSFGDRA 150 Query: 158 LFDTAKLLSGHDFPYATLMYIWENKAPKESVIANTRTGRIQMLVAESGAANVGQWVSYQR 217 AK L G D PYATLMYIW A SVIAN T R+QM+V + GQW + +R Sbjct: 151 GIQLAKKLGGEDLPYATLMYIWSTTAAPGSVIANPHTNRVQMIVVAGKPGDAGQWQTLRR 210 Query: 218 NIVDDYVKVYGEQPGRLIGVGVLTDTDNTEGKVEAWYGDIRLL 260 NI DY + + E PG++ G+LTDTDNT AWYGD+R L Sbjct: 211 NIAQDYEQAFHEPPGKITAYGLLTDTDNTGATTRAWYGDMRFL 253