BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0084.p         (220 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001098565.1| ribulose-phosphate 3-epimerase [Herminiimona...   416   e-114
ref|YP_001351927.1| D-ribulose-5-phosphate 3-epimerase [Janthino...   412   e-113
ref|YP_003777271.1| ribulose-5-phosphate 3-epimerase [Herbaspiri...   409   e-112
ref|XP_002535323.1| ribulose-5-phosphate-3-epimerase, putative [...   394   e-108
ref|ZP_08274202.1| Ribulose-phosphate 3-epimerase [Oxalobacterac...   392   e-107

>ref|YP_001098565.1| ribulose-phosphate 3-epimerase [Herminiimonas arsenicoxydans]
 emb|CAL60436.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
           (PPE) (R5P3E) [Herminiimonas arsenicoxydans]
          Length = 221

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/220 (91%), Positives = 213/220 (96%)

Query: 1   MPNYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
           MP+YRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV
Sbjct: 1   MPSYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60

Query: 61  QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEGSEHIDRSLQLIRDNGCKAGLVFNPGT 120
           QVPIDVHLMVKPVDRI+PDFAKAGANIITFHPE SEH+DR+LQLIRDNGCKAGLVFNP T
Sbjct: 61  QVPIDVHLMVKPVDRIVPDFAKAGANIITFHPEASEHVDRTLQLIRDNGCKAGLVFNPAT 120

Query: 121 PLHFLDHVMDKIDIILIMSVNPGFGGQSFIPEALKKIASVRRRIDESGRDIMLEVDGGIK 180
           PLH+L+HVMDK+DIIL+MSVNPGFGGQSFIP  LKKIA+VR+ IDESGRDIMLEVDGGIK
Sbjct: 121 PLHYLEHVMDKLDIILLMSVNPGFGGQSFIPHTLKKIAAVRKLIDESGRDIMLEVDGGIK 180

Query: 181 IDNIAAAAKAGADTFVAGSAIFGKPDYKAVIDAMRGELAK 220
           +DNI AAA+AGADTFVAGSAIFGKPDYKAVIDAMR ELAK
Sbjct: 181 VDNIEAAARAGADTFVAGSAIFGKPDYKAVIDAMRNELAK 220


>ref|YP_001351927.1| D-ribulose-5-phosphate 3-epimerase [Janthinobacterium sp.
           Marseille]
 gb|ABR88980.1| D-ribulose-5-phosphate 3-epimerase [Janthinobacterium sp.
           Marseille]
          Length = 221

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/220 (92%), Positives = 211/220 (95%)

Query: 1   MPNYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
           MPNYRIAPSILSADFARLGEEV NVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV
Sbjct: 1   MPNYRIAPSILSADFARLGEEVCNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60

Query: 61  QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEGSEHIDRSLQLIRDNGCKAGLVFNPGT 120
           QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPE SEHIDR+LQLIRDNGCKAGLVFNP T
Sbjct: 61  QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRTLQLIRDNGCKAGLVFNPAT 120

Query: 121 PLHFLDHVMDKIDIILIMSVNPGFGGQSFIPEALKKIASVRRRIDESGRDIMLEVDGGIK 180
           PL+ L+HVMDK+DIIL+MSVNPGFGGQSFIP  LKKIA+VR+ IDESGRDIMLEVDGGIK
Sbjct: 121 PLNHLEHVMDKLDIILMMSVNPGFGGQSFIPHTLKKIAAVRKMIDESGRDIMLEVDGGIK 180

Query: 181 IDNIAAAAKAGADTFVAGSAIFGKPDYKAVIDAMRGELAK 220
           IDNI AAA+AGADTFVAGSAIFGKPDYKAVIDAMR ELAK
Sbjct: 181 IDNIEAAARAGADTFVAGSAIFGKPDYKAVIDAMRSELAK 220


>ref|YP_003777271.1| ribulose-5-phosphate 3-epimerase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65363.1| ribulose-5-phosphate 3-epimerase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 221

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/220 (93%), Positives = 215/220 (97%)

Query: 1   MPNYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
           MP YRIAPSILSADFARLGEEVRNVVAAGAD IHFDVMDNHYVPNLTIGPLVCEAIRPHV
Sbjct: 1   MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60

Query: 61  QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEGSEHIDRSLQLIRDNGCKAGLVFNPGT 120
           QVPIDVHLMVKPVDRIIPDFAKAGAN+ITFHPE SEHIDRSLQLIRDNGCKAGLVFNPGT
Sbjct: 61  QVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPGT 120

Query: 121 PLHFLDHVMDKIDIILIMSVNPGFGGQSFIPEALKKIASVRRRIDESGRDIMLEVDGGIK 180
           PLH+LDHVMDK+D++LIMSVNPGFGGQSFIPEALKKIA VRRRIDESGRDI+LEVDGGIK
Sbjct: 121 PLHYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGIK 180

Query: 181 IDNIAAAAKAGADTFVAGSAIFGKPDYKAVIDAMRGELAK 220
           I+NIAAAA+AGADTFVAGSAIFGKPDYKAVIDAMR ELA+
Sbjct: 181 IENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQ 220


>ref|XP_002535323.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
 gb|EEF27061.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
          Length = 228

 Score =  394 bits (1011), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/221 (91%), Positives = 211/221 (95%), Gaps = 2/221 (0%)

Query: 1   MPNYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
           M  YRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVC+AIRPHV
Sbjct: 1   MTTYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCQAIRPHV 60

Query: 61  QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEGSEHIDRSLQLIRDNGCKAGLVFNPGT 120
           QVPIDVHLMVKPVDRIIPDFAKAGA+IITFHPE SEHIDR+LQLIRDNGCKAGLVFNPGT
Sbjct: 61  QVPIDVHLMVKPVDRIIPDFAKAGADIITFHPEASEHIDRTLQLIRDNGCKAGLVFNPGT 120

Query: 121 PLHFLDHVMDKIDIILIMSVNPGFGGQSFIPEALKKIASVRRRIDESGR--DIMLEVDGG 178
           PLH+L+HVMDKID++LIMSVNPGFGGQSFIPEALKKIA  RR ID+SGR  DIMLEVDGG
Sbjct: 121 PLHYLEHVMDKIDMVLIMSVNPGFGGQSFIPEALKKIALARRMIDQSGRGSDIMLEVDGG 180

Query: 179 IKIDNIAAAAKAGADTFVAGSAIFGKPDYKAVIDAMRGELA 219
           IK DNIAAAA+AGADTFVAGSAIFGKPDYKAVIDAMR ELA
Sbjct: 181 IKADNIAAAAEAGADTFVAGSAIFGKPDYKAVIDAMRAELA 221


>ref|ZP_08274202.1| Ribulose-phosphate 3-epimerase [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32338.1| Ribulose-phosphate 3-epimerase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 223

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/219 (91%), Positives = 209/219 (95%)

Query: 1   MPNYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
           MP Y IAPSILSADFARLGEEVRNVV+AGADIIHFDVMDNHYVPNLTIGPLVC AIRPHV
Sbjct: 3   MPTYHIAPSILSADFARLGEEVRNVVSAGADIIHFDVMDNHYVPNLTIGPLVCAAIRPHV 62

Query: 61  QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEGSEHIDRSLQLIRDNGCKAGLVFNPGT 120
           QVPIDVHLMVKPVDR+IPDFAKAGANII+FHPE SEHIDR+LQLIRDNGCKAGLVFNPGT
Sbjct: 63  QVPIDVHLMVKPVDRLIPDFAKAGANIISFHPEASEHIDRTLQLIRDNGCKAGLVFNPGT 122

Query: 121 PLHFLDHVMDKIDIILIMSVNPGFGGQSFIPEALKKIASVRRRIDESGRDIMLEVDGGIK 180
           PLHFLDHVMDKID+ILIMSVNPGFGGQSFIPEALKKIA+VR+ IDESGR I+LEVDGGIK
Sbjct: 123 PLHFLDHVMDKIDLILIMSVNPGFGGQSFIPEALKKIAAVRKLIDESGRTILLEVDGGIK 182

Query: 181 IDNIAAAAKAGADTFVAGSAIFGKPDYKAVIDAMRGELA 219
           I+NIAAAAKAGADTFVAGSAIFG  DYK VIDAMR ELA
Sbjct: 183 IENIAAAAKAGADTFVAGSAIFGAADYKTVIDAMRAELA 221