BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0061.p (808 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775958.1| indolepyruvate ferredoxin oxidoreductase sub... 1061 0.0 ref|YP_001815684.1| pyruvate ferredoxin/flavodoxin oxidoreductas... 743 0.0 ref|YP_002354694.1| indolepyruvate ferredoxin oxidoreductase [Th... 727 0.0 ref|YP_003168697.1| indolepyruvate ferredoxin oxidoreductase [Ca... 715 0.0 ref|YP_283496.1| indolepyruvate ferredoxin oxidoreductase [Dechl... 712 0.0 >ref|YP_003775958.1| indolepyruvate ferredoxin oxidoreductase subunit alpha/beta [Herbaspirillum seropedicae SmR1] gb|ADJ64050.1| indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits, protein [Herbaspirillum seropedicae SmR1] Length = 1180 Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/561 (90%), Positives = 534/561 (95%), Gaps = 8/561 (1%) Query: 27 TTVANSTTSVSGTTPLATVSLDDKYTATSGSIFLSGIQALVRLPLLQYLRDQKAGLNTAG 86 T +A+ST V PLA VSLDDKYTAT+G+I+LSGIQALVRLPLLQ +RD+ AGLNTAG Sbjct: 3 TVLASSTDDV----PLAPVSLDDKYTATTGAIYLSGIQALVRLPLLQQIRDRAAGLNTAG 58 Query: 87 FISGYRGSPLGGLDEALWKAQPHLAAHKIKFQPGTNEDMAATAVWGTQQVDXDLIGPAKV 146 FISGYRGSPLGGLDEALW AQPHLAAH++KFQPG NEDMAATAVWGTQQV LIGP+ Sbjct: 59 FISGYRGSPLGGLDEALWHAQPHLAAHRVKFQPGVNEDMAATAVWGTQQVK--LIGPSDY 116 Query: 147 EGVFSMWYGKGPGVDRCGDVLKHMNHAGTSAKGGVLLVAGDDHGAYSSTLPHQSDHIFSA 206 +GV++MWYGKGPGVDRCGDVLKHMNHAGTSA GGVLLVAGDDHGAYSSTLPHQSDHIFSA Sbjct: 117 DGVYAMWYGKGPGVDRCGDVLKHMNHAGTSAHGGVLLVAGDDHGAYSSTLPHQSDHIFSA 176 Query: 207 SMIPMLYPCNVQEYLDLGLHGWAMSRFSGCTVGFKALADTVESSASVDADPYRVEIKYPA 266 SMIPMLYPCNVQEYLDLGLHGWAMSR+SGC VGFKALADTVESSASVDADP+RV+I+ P+ Sbjct: 177 SMIPMLYPCNVQEYLDLGLHGWAMSRYSGCVVGFKALADTVESSASVDADPFRVQIRLPS 236 Query: 267 DFVMPEGGLNARLSTDTLGVQARKQEALMQDYKIYAALAYARANKLNRVMIDSPKARLGI 326 DFVMPEGGLNARLSTDTLGVQARKQEALMQDYKIYAALAYARAN+LNRVMIDSPKARLGI Sbjct: 237 DFVMPEGGLNARLSTDTLGVQARKQEALMQDYKIYAALAYARANRLNRVMIDSPKARLGI 296 Query: 327 IASGKSYLDVLEALSELGIDEDFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEE 386 IASGKSYLDVLEALSELGIDE FAAEIGLRLFKVSMPWPLEP+GVREFAQGLDEILVVEE Sbjct: 297 IASGKSYLDVLEALSELGIDEAFAAEIGLRLFKVSMPWPLEPDGVREFAQGLDEILVVEE 356 Query: 387 KRQMVEYQLKEQLYNWRDDVRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAA 446 KRQMVEYQLKEQLYNWRDDVRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAA Sbjct: 357 KRQMVEYQLKEQLYNWRDDVRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAA 416 Query: 447 RIARFHTSDLIKARLAFLDAKDAVLNKAISTPPRPAYYCSGCPHNTSTKVPEGSFALAGI 506 RIARFHTSDLIKARLAFLDAKDAVL+KA++TPPRPAYYCSGCPHN+ST+VPEGSFALAGI Sbjct: 417 RIARFHTSDLIKARLAFLDAKDAVLSKAVNTPPRPAYYCSGCPHNSSTRVPEGSFALAGI 476 Query: 507 GCHVMATAIYPEFNKLTTHMGGEGGPWIGQAPFSQVPHVFANLGDGTYFHSGYLAIRAAV 566 GCHVMATAIYPEFNKLTTHMGGEG PWIGQAPFS+VPHVFANLGDGTYFHSGYLAIRAAV Sbjct: 477 GCHVMATAIYPEFNKLTTHMGGEGAPWIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAV 536 Query: 567 AANVNMTYKILYNXAANVNMT 587 AA VNMTYKILYN A V MT Sbjct: 537 AAKVNMTYKILYNDA--VAMT 555 >ref|YP_001815684.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Burkholderia ambifaria MC40-6] gb|ACB68131.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Burkholderia ambifaria MC40-6] Length = 1182 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/540 (66%), Positives = 432/540 (80%), Gaps = 4/540 (0%) Query: 48 DDKYTATSGSIFLSGIQALVRLPLLQYLRDQKAGLNTAGFISGYRGSPLGGLDEALWKAQ 107 D ++TAT+G ++LSG+QALVRL ++Q +RD AGL+TAGF+SGYRGSPLGGLD +A+ Sbjct: 3 DGRFTATAGRVYLSGVQALVRLTVMQRMRDAAAGLSTAGFVSGYRGSPLGGLDLEFVRAR 62 Query: 108 PHLAAHKIKFQPGTNEDMAATAVWGTQQVDXDLIGPAKVEGVFSMWYGKGPGVDRCGDVL 167 L+AH+I+FQPG NE++AATAVWGTQQVD LIG +K +GVF++WYGKGPGVDR DVL Sbjct: 63 DVLSAHEIRFQPGVNEELAATAVWGTQQVD--LIGESKFDGVFALWYGKGPGVDRSVDVL 120 Query: 168 KHMNHAGTSAKGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDLGLHG 227 KHMN+AGTSA GGVLLVAGDDHGAYSSTLPHQSDH+FSA+MIP+LYPCNV EY++LGLHG Sbjct: 121 KHMNYAGTSAHGGVLLVAGDDHGAYSSTLPHQSDHVFSAAMIPVLYPCNVDEYIELGLHG 180 Query: 228 WAMSRFSGCTVGFKALADTVESSASVDADPYRVEIKYPADFVMPEGGLNARLSTDTLGVQ 287 +AMSR+SGC VGFKALADTVESSASVDADP V I+ P D V+PEGGLN R S+ TLG Q Sbjct: 181 FAMSRYSGCAVGFKALADTVESSASVDADPCAVRIRTPEDHVLPEGGLNCRTSSATLGAQ 240 Query: 288 ARKQEALMQDYKIYAALAYARANKLNRVMIDSPKARLGIIASGKSYLDVLEALSELGIDE 347 AR QE L +K +A LAYARAN+LNRV+ +P+AR+GI+A+GKSYLDV EAL LG+D+ Sbjct: 241 ARAQEWLTHQHKYFAVLAYARANRLNRVVGTAPRARIGIVATGKSYLDVCEALKLLGVDD 300 Query: 348 DFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNWRDDVR 407 A+ +RLFKV+MPWPLEPEGV EFAQGLDEI+VVEEKR +VE Q++ LY+W + +R Sbjct: 301 SGGADAAIRLFKVAMPWPLEPEGVHEFAQGLDEIVVVEEKRPIVEPQIRTMLYDWPEALR 360 Query: 408 PRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHTSDLIKARLAFLDAK 467 P + GK +E G E +L+S DFSV +IARVIA R+ R + ++RL + Sbjct: 361 PAIHGKTNEYGTIGDCDPESVLSSVGDFSVIRIARVIAGRLERLFGTQAFRSRLQAFEQS 420 Query: 468 DAVLNKAISTPPRPAYYCSGCPHNTSTKVPEGSFALAGIGCHVMATAIYPEFNKLTTHMG 527 V+ +A S P R AYYCSGCPH+TST+VP GS ALAGIGCHVMAT+IYPE N+ T MG Sbjct: 421 LDVVQRARSIPARSAYYCSGCPHSTSTRVPPGSVALAGIGCHVMATSIYPEHNRTFTQMG 480 Query: 528 GEGGPWIGQAPFSQVPHVFANLGDGTYFHSGYLAIRAAVAANVNMTYKILYNXAANVNMT 587 GEG WIGQAPFS PHVFANLGDGTYFHSGYLAIRAAVAA +TYKILYN A V MT Sbjct: 481 GEGATWIGQAPFSNRPHVFANLGDGTYFHSGYLAIRAAVAAGTRITYKILYNDA--VAMT 538 >ref|YP_002354694.1| indolepyruvate ferredoxin oxidoreductase [Thauera sp. MZ1T] gb|ACK53798.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Thauera sp. MZ1T] Length = 1198 Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/546 (64%), Positives = 425/546 (77%), Gaps = 11/546 (2%) Query: 44 TVSLDDKYTATSGSIFLSGIQALVRLPLLQYLRDQKAGLNTAGFISGYRGSPLGGLDEAL 103 TVSLDDKYT +G +++GIQALVRLP++Q LRD+ AGLNTAGF++GYRGSPLG +D+ Sbjct: 7 TVSLDDKYTLKTGRAWMTGIQALVRLPMMQKLRDEAAGLNTAGFVTGYRGSPLGSVDQEF 66 Query: 104 WKAQPHLAAHKIKFQPGTNEDMAATAVWGTQQVDXDLIGPAKVEGVFSMWYGKGPGVDRC 163 WKA+ L I+FQPG NED+AAT+VWGTQQ+ D AKV+GVFS+WYGKGPGVDR Sbjct: 67 WKAKRFLEPMNIRFQPGLNEDLAATSVWGTQQLGLD--PNAKVDGVFSIWYGKGPGVDRT 124 Query: 164 GDVLKHMNHAGTSAKGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDL 223 DV +H N AGTS GGVL++AGDDH A SSTLPHQ++H+F A M+P+L P +QEYL+ Sbjct: 125 CDVFRHANAAGTSQHGGVLVIAGDDHAAKSSTLPHQTEHVFKALMMPVLAPAGIQEYLEY 184 Query: 224 GLHGWAMSRFSGCTVGFKALADTVESSASVDADPYRVEIKYPA--DFVMPEGGLNARLST 281 GLHG+AMSR+SGC V FKAL DTVE+S+SVD DP+RV+I+ P+ +F +P GLN R Sbjct: 185 GLHGFAMSRYSGCWVAFKALTDTVETSSSVDIDPFRVDIRVPSAQEFPLPLDGLNLRWPD 244 Query: 282 DTLGVQARKQEALMQDYKIYAALAYARANKLNRVMIDSPKARLGIIASGKSYLDVLEALS 341 L QE + +K+YAALAY R N L+R++ID P+ARLGI+ SGKSYLDV +AL Sbjct: 245 PPL-----VQEERLLHHKLYAALAYGRKNGLDRMVIDPPQARLGILTSGKSYLDVRQALD 299 Query: 342 ELGIDEDFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQLKEQLYN 401 +LGIDE AA IGLRL+KV M WPL+ EGVR FA GLDEILV+EEKRQ +EYQLKE+LYN Sbjct: 300 DLGIDETTAAAIGLRLYKVGMVWPLDAEGVRRFADGLDEILVIEEKRQFLEYQLKEELYN 359 Query: 402 WRDDVRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHTSDLIKARL 461 W+D+VRPRVIGKFDEKGEW P +WLL + + + A IAR IA RIARFHTSD IKARL Sbjct: 360 WKDEVRPRVIGKFDEKGEWSLPHADWLLPAAGELTPAMIARAIAGRIARFHTSDRIKARL 419 Query: 462 AFLDAKDAVLNKAISTPPRPAYYCSGCPHNTSTKVPEGSFALAGIGCHVMATAIYPEFNK 521 AF++AK+A L + + R +YCSGCPHNTSTKVP+GS A+AGIGCH MAT + PE + Sbjct: 420 AFIEAKEAALARPRLSIQRVPHYCSGCPHNTSTKVPQGSRAIAGIGCHYMATWLSPEHTQ 479 Query: 522 LTTHMGGEGGPWIGQAPFSQVPHVFANLGDGTYFHSGYLAIRAAVAANVNMTYKILYNXA 581 MGGEG PWIGQAPF+ PHVFANLGDGTY HSG LAIRAAVAA VN+TYK+LYN A Sbjct: 480 TFCQMGGEGVPWIGQAPFTNTPHVFANLGDGTYMHSGILAIRAAVAAKVNITYKVLYNDA 539 Query: 582 ANVNMT 587 V MT Sbjct: 540 --VAMT 543 >ref|YP_003168697.1| indolepyruvate ferredoxin oxidoreductase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV36768.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1200 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/572 (63%), Positives = 434/572 (75%), Gaps = 37/572 (6%) Query: 42 LATVSLDDKYTATSGSIFLSGIQALVRLPLLQYLRDQKAGLNTAGFISGYRGSPLGGLDE 101 LAT +LD +YTATSG +FL+G QALVRLP+LQ LRD+ AGLNTAGF+SGYRGSPLGGLD+ Sbjct: 4 LAT-TLDSRYTATSGRVFLTGTQALVRLPMLQRLRDEAAGLNTAGFVSGYRGSPLGGLDQ 62 Query: 102 ALWKAQPHLAAHKIKFQPGTNEDMAATAVWGTQQVDXDLIGPAKVEGVFSMWYGKGPGVD 161 ALWKA+ HL A +I FQP NED+AATAVWGTQQ++ L A+ +GVF+MWYGKGPGVD Sbjct: 63 ALWKARQHLDAQRIVFQPAVNEDLAATAVWGTQQLN--LFPGARYDGVFAMWYGKGPGVD 120 Query: 162 RCGDVLKHMNHAGTSAKGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYL 221 RCGDV +H N AGT+ GGVL++AGDDH A SSTLPHQ++H+F A M+P+LYP NVQEYL Sbjct: 121 RCGDVFRHANAAGTARYGGVLVIAGDDHAAKSSTLPHQTEHVFKAVMMPVLYPANVQEYL 180 Query: 222 DLGLHGWAMSRFSGCTVGFKALADTVESSASVDADPYRVEIKYPADFVMPEG---GLNAR 278 D GLHGWAMSR+SGC V KALADTVE+SASV DP I+ P DF MPE GLN R Sbjct: 181 DYGLHGWAMSRYSGCWVVMKALADTVETSASVAIDPLSTVIRLPDDFAMPENDAHGLNIR 240 Query: 279 LSTDTLGVQARKQEALMQDYKIYAALAYARANKLNRVMIDS----PKARLGIIASGKSYL 334 L +QEA + + K+YAALAY RAN+LNR++IDS ARLGII +GK+YL Sbjct: 241 WPDPPL-----QQEARLLNRKLYAALAYCRANQLNRIVIDSADPASPARLGIITAGKAYL 295 Query: 335 DVLEALSELGIDEDFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQ 394 DV +AL+ELGID++ AA IG+RL+KV M WPLE +GVR FA+GL+EILVVEEKRQ++EYQ Sbjct: 296 DVRQALTELGIDDELAARIGIRLYKVGMVWPLEADGVRRFAEGLEEILVVEEKRQLIEYQ 355 Query: 395 LKEQLYNWRDDVRPRVIGKFDEKGEW-VAP-------RGEWLLTSKADFSVAQIARVIAA 446 LKE+LYNWR+DVRPRV+GKFDEKGEW + P G+WLL + + SVAQ+AR +A+ Sbjct: 356 LKEELYNWREDVRPRVVGKFDEKGEWSLLPTGSGHLTHGDWLLPAAGELSVAQVARALAS 415 Query: 447 RIARFHTSDLIKARLAFLDAK-DAVLNKAISTPP----------RPAYYCSGCPHNTSTK 495 RI RF TS I RLA L+AK ++ A ST P R Y+CSGCPHNTST+ Sbjct: 416 RIDRFFTSPAIVERLALLEAKQNSPTTPAPSTAPTGAAALATIQRTPYFCSGCPHNTSTR 475 Query: 496 VPEGSFALAGIGCHVMATAIYPEFNKLTTHMGGEGGPWIGQAPFSQVPHVFANLGDGTYF 555 VPEGS A+AGIGCH M T + THMGGEG W+GQAPF+ V H+FANLGDGTYF Sbjct: 476 VPEGSRAVAGIGCHYMVTWM-DRSTATFTHMGGEGVTWVGQAPFTDVKHIFANLGDGTYF 534 Query: 556 HSGYLAIRAAVAANVNMTYKILYNXAANVNMT 587 HSG LAIR +VAA V++TYKILYN A V MT Sbjct: 535 HSGLLAIRQSVAAGVSITYKILYNDA--VAMT 564 >ref|YP_283496.1| indolepyruvate ferredoxin oxidoreductase [Dechloromonas aromatica RCB] gb|AAZ45026.1| Pyruvate ferredoxin/flavodoxin oxidoreductase [Dechloromonas aromatica RCB] Length = 1150 Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/542 (64%), Positives = 411/542 (75%), Gaps = 12/542 (2%) Query: 46 SLDDKYTATSGSIFLSGIQALVRLPLLQYLRDQKAGLNTAGFISGYRGSPLGGLDEALWK 105 +LDDKYT +SG +FL+G QAL+RLP+LQ RD AGLNTAGFISGYRGSPLG LD LWK Sbjct: 13 TLDDKYTRSSGRVFLTGTQALIRLPMLQRERDLAAGLNTAGFISGYRGSPLGNLDLGLWK 72 Query: 106 AQPHLAAHKIKFQPGTNEDMAATAVWGTQQVDXDLIGPAKVEGVFSMWYGKGPGVDRCGD 165 A+ HLA H I FQPG NED+AATAVWG+QQV+ L A+ +GVF +WYGKGPGVDRCGD Sbjct: 73 AKAHLAEHHITFQPGINEDLAATAVWGSQQVN--LFPGAQYDGVFGLWYGKGPGVDRCGD 130 Query: 166 VLKHMNHAGTSAKGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDLGL 225 V +H N AG+S GGVL++AGDDH A SSTLPHQ++H+F A M+P+LYP NVQEYLD GL Sbjct: 131 VFRHANAAGSSKFGGVLVIAGDDHAAKSSTLPHQTEHVFKALMMPVLYPANVQEYLDFGL 190 Query: 226 HGWAMSRFSGCTVGFKALADTVESSASVDADPYRVEIKYPADFVMPEGGLNARLSTDTLG 285 HGWAMSR+SGC V FKALADTVE+SASV DP + P DF +P GLN R L Sbjct: 191 HGWAMSRYSGCWVAFKALADTVETSASVTIDPAALTPIIPPDFKLPPDGLNIRWPDPPL- 249 Query: 286 VQARKQEALMQDYKIYAALAYARANKLNRVMIDSPKARLGIIASGKSYLDVLEALSELGI 345 QEA + ++K+YAALAY R N LN+++IDSP +LGI+ +GKSYLDV +AL ELGI Sbjct: 250 ----VQEARLLNHKLYAALAYCRTNGLNKLIIDSPTPKLGILTAGKSYLDVRQALDELGI 305 Query: 346 DEDFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNWRDD 405 D+ AAEIG+RL+KV M WPLEPEGVR+FA+GL+EILVVEEKRQ++EYQLKE+LYNWRDD Sbjct: 306 DDQLAAEIGIRLYKVGMVWPLEPEGVRQFAEGLEEILVVEEKRQLLEYQLKEELYNWRDD 365 Query: 406 VRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHTSDLIKARLAFLD 465 VRPRVIGKFDE GEW G WLL + + VA IARVIA RI RF TS I ARL + Sbjct: 366 VRPRVIGKFDEIGEW--SEGNWLLPAAGELPVATIARVIAERIGRFFTSPTIAARLKVIA 423 Query: 466 AKDAVLNKAISTPPRPAYYCSGCPHNTSTKVPEGSFALAGIGCHVMATAIYPEFNKLTTH 525 K I R ++CSGCPHN+STKVPEGS A+AGIGCH M T + + TH Sbjct: 424 DKQKAAQTPIVLAERKPHFCSGCPHNSSTKVPEGSRAVAGIGCHYMVTWMDRSTSTF-TH 482 Query: 526 MGGEGGPWIGQAPFSQVPHVFANLGDGTYFHSGYLAIRAAVAANVNMTYKILYNXAANVN 585 MGGEG PW+GQAPF+ H+FANLGDGTYFHSG LAIR ++AA V +TYKILYN A V Sbjct: 483 MGGEGVPWVGQAPFTSEKHIFANLGDGTYFHSGLLAIRQSIAAKVPITYKILYNDA--VA 540 Query: 586 MT 587 MT Sbjct: 541 MT 542