BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0060.p (446 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777281.1| ubiquinone biosynthesis transmembrane protei... 808 0.0 ref|YP_004751303.1| Ubiquinone biosynthesis monooxygenase [Colli... 775 0.0 ref|YP_001101088.1| 2-octaprenylphenol hydroxylase [Herminiimona... 746 0.0 ref|YP_001354798.1| ubiquinone biosynthesis protein [Janthinobac... 744 0.0 ref|ZP_08274323.1| Ubiquinone biosynthesis monooxygenase UbiB [O... 731 0.0 >ref|YP_003777281.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65373.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 524 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/446 (89%), Positives = 425/446 (95%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P DIA+ELT LQDRVPPFDS+LA+ QIEKSLGAHPD+LFA+F+RTP+ASASIAQVHFA Sbjct: 78 LMPPDIANELTLLQDRVPPFDSELAVKQIEKSLGAHPDLLFATFERTPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 TLKDG EVAVKVLRPGMR IDHDIGLMH+AADW+ERLWADGRRLKAKEVVGEFDKYLHD Sbjct: 138 TLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGRRLKAKEVVGEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAANASQLRRNFA S LLMVPEMYWDYCS SVIVMERMHGIPI QTERL+AEGV Sbjct: 198 ELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSPSVIVMERMHGIPISQTERLRAEGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVS AP +FGRYIALDFGIVGTL DFDK Sbjct: 258 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDLWKTAKPYLERWM+EQIG Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYLERWMSEQIG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRGF++QLKVEVPRYSRLLP+LPRLAHQALT TEG QN +L+RKL+AEQRRTN+ L Sbjct: 438 WRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTEGDSQPQNTELIRKLLAEQRRTNMFL 497 Query: 421 GVIVYFGGGLIGGIIVVQVLLHFLRY 446 GVIVYFGGGLIGG+IV+Q+L+HFL++ Sbjct: 498 GVIVYFGGGLIGGVIVIQLLMHFLKF 523 >ref|YP_004751303.1| Ubiquinone biosynthesis monooxygenase [Collimonas fungivorans Ter331] gb|AEK60480.1| Ubiquinone biosynthesis monooxygenase [Collimonas fungivorans Ter331] Length = 525 Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/443 (84%), Positives = 406/443 (91%), Gaps = 1/443 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 LLP D+ DEL RLQDRVPPF SDLAIAQIEKSL AHPD LFASF+R P+ASASIAQVHFA Sbjct: 78 LLPGDMVDELARLQDRVPPFSSDLAIAQIEKSLKAHPDQLFASFERVPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 TLK+G EVAVKVLRPGM+ +ID D+ LMHIAA VE+LWADGRRLKA+EVVGEFDKYLHD Sbjct: 138 TLKNGKEVAVKVLRPGMKKSIDEDVALMHIAAGLVEKLWADGRRLKAREVVGEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFANSDLL+VPEMYWDYCSSSVIVMERMHGIPI Q +RL+ GV Sbjct: 198 ELDLMREAANGSQLRRNFANSDLLVVPEMYWDYCSSSVIVMERMHGIPISQLDRLRDAGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DL KLSRDGVEIFFTQVFRDGFFHADMHPGNILVS APATFGRYIALDFGIVGTL DFDK Sbjct: 258 DLGKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPATFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFFQRDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPLKDISFGQ Sbjct: 318 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLKDISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDLWKTAKP+LERWM+EQ+G Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPHLERWMSEQMG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRG IQQLK+E+PRYS+LLPQLPRLAHQALT A E ++EQN +L+ KL+AEQR+TN L Sbjct: 438 WRGLIQQLKIEMPRYSKLLPQLPRLAHQALTQAVE-PKNEQNNELMWKLIAEQRQTNHFL 496 Query: 421 GVIVYFGGGLIGGIIVVQVLLHF 443 GV+VY GGGL G+++ + L F Sbjct: 497 GVLVYVGGGLAAGVLLTLLYLRF 519 >ref|YP_001101088.1| 2-octaprenylphenol hydroxylase [Herminiimonas arsenicoxydans] emb|CAL62967.1| 2-polyprenylphenol 6-hydroxylase [Herminiimonas arsenicoxydans] Length = 520 Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/443 (81%), Positives = 394/443 (88%), Gaps = 2/443 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P+DIADEL RLQDRVPPF S+LAIAQI KSLGAHPDVLFA F+ P+ASASIAQVHFA Sbjct: 78 LMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAHFEAEPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 LK+G +VAVKVLRPG+R +ID D+ LMHI A VE+LWADG+RLK KEVV EFDKYLHD Sbjct: 138 RLKNGRDVAVKVLRPGVRKSIDDDVALMHIVAGLVEKLWADGKRLKPKEVVAEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFA S LL+VPEM+WDYCS+SVIVMERM GIPI QT+RL A G+ Sbjct: 198 ELDLMREAANGSQLRRNFAASKLLVVPEMFWDYCSTSVIVMERMIGIPISQTDRLIAAGI 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VS AP TFGRYIALDFGIVGTL DFDK Sbjct: 258 DLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVAPETFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPL +ISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLSEISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLE WMNEQ+G Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLENWMNEQVG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRGF++ LK E PRYS+LLPQLPRLAHQALT A+E + N +L+R+L+ EQ+RTNLLL Sbjct: 438 WRGFLENLKAEAPRYSKLLPQLPRLAHQALTQASEP--RQDNTELIRRLLEEQKRTNLLL 495 Query: 421 GVIVYFGGGLIGGIIVVQVLLHF 443 GV VYFGGGL+ G I+ + F Sbjct: 496 GVAVYFGGGLVAGGILTLMFFTF 518 >ref|YP_001354798.1| ubiquinone biosynthesis protein [Janthinobacterium sp. Marseille] gb|ABR88520.1| ubiquinone biosynthesis protein [Janthinobacterium sp. Marseille] Length = 521 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/444 (80%), Positives = 393/444 (88%), Gaps = 2/444 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P+DIADEL RLQDRVPPF S+LAIAQI KSLGAHPDVLFA FD P+ASASIAQVHF Sbjct: 78 LMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAEFDPVPVASASIAQVHFG 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 LK+GT VA+KVLRPG++ +ID D+ LMHI A VER+WADG+RLK KEVV EFDKYLHD Sbjct: 138 RLKNGTAVAIKVLRPGIKKSIDEDVALMHILAGLVERMWADGKRLKPKEVVAEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFA+S+LL+VPEM+WDYCS+SVIVMERM GIPI QT+RL A GV Sbjct: 198 ELDLMREAANGSQLRRNFADSNLLVVPEMFWDYCSTSVIVMERMVGIPISQTDRLIAAGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VS PATFGRYIALDFGIVGTL DFDK Sbjct: 258 DLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVEPATFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPL +ISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLSEISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLE WMNEQ+G Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLENWMNEQVG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRG + LK E PRYS+LLPQLPRLAHQALT A++ N +L+++L+ EQ+RTNLLL Sbjct: 438 WRGLWENLKAEAPRYSKLLPQLPRLAHQALTQASQP--QNDNTELIKRLLEEQKRTNLLL 495 Query: 421 GVIVYFGGGLIGGIIVVQVLLHFL 444 GV +YFGGGL+ G I+ V F+ Sbjct: 496 GVAIYFGGGLVAGGILTLVFFTFV 519 >ref|ZP_08274323.1| Ubiquinone biosynthesis monooxygenase UbiB [Oxalobacteraceae bacterium IMCC9480] gb|EGF32184.1| Ubiquinone biosynthesis monooxygenase UbiB [Oxalobacteraceae bacterium IMCC9480] Length = 523 Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/446 (78%), Positives = 391/446 (87%), Gaps = 2/446 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P DIA+ELT LQDRVPPFDS+LAIAQI KSLGAHP LFASFDR P+ASASIAQVHFA Sbjct: 78 LMPPDIAEELTSLQDRVPPFDSELAIAQITKSLGAHPSELFASFDRVPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 LKDG EVAVKVLRPGM+ +ID D+ LMH+AA VERLWAD +RLK +EVVGEFDKYLHD Sbjct: 138 VLKDGREVAVKVLRPGMKKSIDEDVALMHVAAGLVERLWADAKRLKPREVVGEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFA+S LLMVPEM WDYCSS+VIVMERM GIPI + ++L A GV Sbjct: 198 ELDLMREAANGSQLRRNFADSTLLMVPEMMWDYCSSAVIVMERMKGIPISRIDQLVAAGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 D+ KLS DGVEIFFTQVFRDGFFHADMHPGNILVS PAT GRYIALDFGIVGTL DFDK Sbjct: 258 DMKKLSSDGVEIFFTQVFRDGFFHADMHPGNILVSIEPATLGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPLKDISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLKDISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 +LLRLFQTSRRFNVEVQPQLVLLQKTLLN+EGLGRQLDP+LDLWKTAKPYLERWM EQIG Sbjct: 378 ILLRLFQTSRRFNVEVQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPYLERWMTEQIG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRG +++LK E P Y++LLPQLPR+ HQAL + ++ N LL L+AEQRRTN L+ Sbjct: 438 WRGLVERLKAEAPHYNKLLPQLPRMMHQALAQIAQP--NDDNKVLLVALLAEQRRTNRLI 495 Query: 421 GVIVYFGGGLIGGIIVVQVLLHFLRY 446 G +VYF GLIGG+++V+ + +L + Sbjct: 496 GTVVYFAAGLIGGLLLVRFVGRWLAW 521