BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0044.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777291.1| lipoprotein [Herbaspirillum seropedicae SmR1... 285 5e-75 ref|YP_004751281.1| lipid A acylation protein, palmitoyltransfer... 222 3e-56 ref|ZP_08274802.1| Lipid A acylation protein PagP, palmitoyltran... 192 5e-47 ref|YP_003644106.1| Antimicrobial peptide resistance and lipid A... 122 7e-26 ref|YP_003976872.1| antimicrobial peptide resistance and lipid A... 116 3e-24 >ref|YP_003777291.1| lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65383.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 205 Score = 285 bits (728), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 131/179 (73%), Positives = 155/179 (86%), Gaps = 1/179 (0%) Query: 63 LGCAATSLPAMAQQSD-EFSWWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQ 121 + AA +L +A D ++S WQ KDHA+ I ++G+ +Y+SG+AHHGR TYTKEKL++ Sbjct: 27 VATAAIALAPVAHAEDNQYSLWQQTKDHAANIWNQGESELYLSGVAHHGRGTYTKEKLNE 86 Query: 122 LNEHAWGLGYGKTMRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIG 181 LNEHAWGLGYGKT+RNE+G+DESLYGFVLKDSHRHPQ MAGYAYEWV+PI T LE+G+G Sbjct: 87 LNEHAWGLGYGKTLRNEKGDDESLYGFVLKDSHRHPQYMAGYAYEWVFPIAKTGLEVGLG 146 Query: 182 GTAMLMSRQDYFGGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240 GTAMLMSRQDYF VPFPVPLPLASIGTKK K+MFAYVPRLS+NKN+GDVLL+FGRIEM Sbjct: 147 GTAMLMSRQDYFHSVPFPVPLPLASIGTKKGKIMFAYVPRLSANKNNGDVLLIFGRIEM 205 >ref|YP_004751281.1| lipid A acylation protein, palmitoyltransferase [Collimonas fungivorans Ter331] gb|AEK60458.1| Lipid A acylation protein, palmitoyltransferase [Collimonas fungivorans Ter331] Length = 205 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 104/179 (58%), Positives = 133/179 (74%), Gaps = 5/179 (2%) Query: 67 ATSLPAMAQQSDEFSWWQS-----IKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQ 121 A + PA AQ++ + + W S +D S I + GD +Y+SG A+HGR TYT+EKL + Sbjct: 26 AMAAPAQAQETPDTTGWFSKTLTQTQDRLSNIANNGDMEVYLSGYAYHGRRTYTEEKLQE 85 Query: 122 LNEHAWGLGYGKTMRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIG 181 LNE AWGLG G+T+RN GNDESLY F ++DSHR PQIMAGYAYEW++ + TP+E+G G Sbjct: 86 LNEKAWGLGGGRTIRNADGNDESLYLFAIRDSHRKPQIMAGYAYEWIWNVPKTPVEVGAG 145 Query: 182 GTAMLMSRQDYFGGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240 TAMLMSRQDYFGG PFP+ LP+ S+G K AK+M +YVPRLS NK +GDV L+F R E+ Sbjct: 146 YTAMLMSRQDYFGGFPFPIALPVVSLGVKGAKLMGSYVPRLSQNKGNGDVWLIFARFEV 204 >ref|ZP_08274802.1| Lipid A acylation protein PagP, palmitoyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31709.1| Lipid A acylation protein PagP, palmitoyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 191 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 94/179 (52%), Positives = 124/179 (69%), Gaps = 5/179 (2%) Query: 66 AATSLPA----MAQQSDEFSWWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQ 121 AA ++PA ++ S + SWW +D IVD G +I +SG A HGR+TYT E++ + Sbjct: 13 AAHAMPADDTPLSTSSTDVSWWSQGEDKLRHIVDDGVPSIVLSGYARHGRNTYTAERIRE 72 Query: 122 LNEHAWGLGYGKTMRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIG 181 LNE AWGLGY K +R N+ESLYG + DSH PQ+MAGY ++W+ P+GH E G+G Sbjct: 73 LNEKAWGLGYSKIVRTASDNEESLYGLAIYDSHYKPQLMAGYLHQWMQPLGHG-YEAGVG 131 Query: 182 GTAMLMSRQDYFGGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240 T +L+SR DYF GVPFP LP+AS GT+K K+M AYVPRLS +K +GDVLL+F R E+ Sbjct: 132 LTGLLISRADYFSGVPFPCILPVASAGTRKTKLMAAYVPRLSRSKGNGDVLLMFLRAEL 190 >ref|YP_003644106.1| Antimicrobial peptide resistance and lipid A acylation PagP [Thiomonas intermedia K12] emb|CAZ89428.1| putative Antimicrobial peptide resistance and lipid A acylation PagP [Thiomonas sp. 3As] gb|ADG31776.1| Antimicrobial peptide resistance and lipid A acylation PagP [Thiomonas intermedia K12] Length = 192 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 1/159 (0%) Query: 82 WWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQLNEHAWGLGYGKTMRNERGN 141 W QS + A G D +Y SG H TYT K LN+HAWG+G+G+ N GN Sbjct: 35 WAQSTWNAAVSTTQTGQDDLYFSGYTWHDPGTYTAAKRATLNKHAWGIGWGRHHINADGN 94 Query: 142 DESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIGGTAMLMSRQDYFGGVPFPVP 201 ++ +Y + DSH + + + GYA++W++ P+ G+G T + SR D F +PFP+ Sbjct: 95 EDMVYAMIFSDSHWNAEPVVGYAHQWMFN-NDAPVGFGLGYTLAVTSRADIFHNIPFPIA 153 Query: 202 LPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240 LP+ASI + + ++P++++ N+G+V FGR E Sbjct: 154 LPIASIRFGRLSIYGTFIPKVNNKLNNGNVAFFFGRYEF 192 >ref|YP_003976872.1| antimicrobial peptide resistance and lipid A acylation protein PagP [Achromobacter xylosoxidans A8] gb|ADP14157.1| antimicrobial peptide resistance and lipid A acylation protein PagP [Achromobacter xylosoxidans A8] Length = 184 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 94/170 (55%), Gaps = 5/170 (2%) Query: 69 SLPAMAQQSDEF-SWWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQLNEHAW 127 + A AQ D SW QS + +I ++G + +Y +G + H R+TY+KEK+D NE AW Sbjct: 16 TFAATAQACDSMPSWAQSACNRLDQIWNEGGNDLYFTGYSWHNRATYSKEKIDSFNELAW 75 Query: 128 GLGYGKTMRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIGGTAMLM 187 G GYG+++ +E G+ + LY DSH + +AGY + + + LG G T L Sbjct: 76 GGGYGRSIYDEDGDWQGLYAMAFLDSHSKVEPIAGYGFLKIGRVSEN-FRLGAGYTVFLT 134 Query: 188 SRQDYFGGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGR 237 +R D VPFP LPL S G K A + Y+P + +G+VL +FGR Sbjct: 135 ARHDIMSYVPFPGILPLVSAGYKDAMLYATYIP---GSAGAGNVLFMFGR 181