BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0037.p         (88 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777297.1| TPR repeat containing protein [Herbaspirillu...   139   1e-31
ref|YP_001354815.1| hypothetical protein mma_3125 [Janthinobacte...   127   4e-28
ref|ZP_08273346.1| putative signal peptide containing protein [O...   123   1e-26
ref|YP_001101125.1| TPR repeat-containing protein [Herminiimonas...   122   1e-26
ref|YP_004751273.1| hypothetical protein CFU_0614 [Collimonas fu...   120   8e-26

>ref|YP_003777297.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65389.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
          Length = 600

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/87 (70%), Positives = 74/87 (85%)

Query: 1   VQLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEA 60
            ++APEDAFIADSLGW  FR+G LDEAE ++RRAY LRPD EIG+HLGE+LWTRGKQDEA
Sbjct: 513 AEMAPEDAFIADSLGWVLFRMGRLDEAETQMRRAYGLRPDAEIGVHLGEVLWTRGKQDEA 572

Query: 61  KRLWREAQSKDPKNDVLKSTLDRLKVQ 87
           +++WR+   KDP N+VLKSTL RL V+
Sbjct: 573 RKIWRDVAQKDPANEVLKSTLTRLNVK 599


>ref|YP_001354815.1| hypothetical protein mma_3125 [Janthinobacterium sp. Marseille]
 gb|ABR91232.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 598

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 72/87 (82%)

Query: 2   QLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEAK 61
           ++APED FI DS+GW +FRLG L EAE  LRRAYA+RPD EIG+HLGE+LW +G++ EA+
Sbjct: 512 KIAPEDPFIMDSMGWVQFRLGRLQEAENYLRRAYAIRPDVEIGVHLGEVLWVKGQRAEAQ 571

Query: 62  RLWREAQSKDPKNDVLKSTLDRLKVQL 88
           + WR+A  KDP++D+LKSTL RL+ QL
Sbjct: 572 KFWRDANQKDPQSDLLKSTLTRLRAQL 598


>ref|ZP_08273346.1| putative signal peptide containing protein [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF33178.1| putative signal peptide containing protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 596

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 72/88 (81%)

Query: 1   VQLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEA 60
           + LAP+D FI DS+GW ++R+G L EAE  LRRAYALR D EI +HLGE+LW RG++ +A
Sbjct: 509 LTLAPDDPFIMDSMGWVQYRMGKLPEAETLLRRAYALRQDAEIAVHLGEVLWVRGEKVDA 568

Query: 61  KRLWREAQSKDPKNDVLKSTLDRLKVQL 88
           +R WR+A+SKDPKND LK+TL RL+V+L
Sbjct: 569 QRFWRDARSKDPKNDSLKNTLTRLQVKL 596


>ref|YP_001101125.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans]
 emb|CAL63004.1| Conserved hypothetical protein; putative exported protein; putative
           TPR repeat domain [Herminiimonas arsenicoxydans]
          Length = 602

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 72/87 (82%)

Query: 2   QLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEAK 61
           +LAPED FI DS+GW  FRLG L EAE  LRRAYA+RPD EIG+HLGE+LW +G+++ A+
Sbjct: 516 KLAPEDPFIMDSMGWVYFRLGKLREAEDFLRRAYAIRPDVEIGVHLGEVLWVKGEKEAAQ 575

Query: 62  RLWREAQSKDPKNDVLKSTLDRLKVQL 88
           +LWREA  KDP++D+LK+TL RL+ +L
Sbjct: 576 QLWREANQKDPQSDMLKNTLARLRTKL 602


>ref|YP_004751273.1| hypothetical protein CFU_0614 [Collimonas fungivorans Ter331]
 gb|AEK60450.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 636

 Score =  120 bits (301), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 68/88 (77%)

Query: 1   VQLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEA 60
           + LAP+D FI DS+GW ++RLGNL EAE  LR AY L PDPEI +HLGE+LW +G++ +A
Sbjct: 549 LTLAPQDPFIVDSMGWVQYRLGNLGEAETRLRTAYGLLPDPEIAVHLGEVLWVKGQKTDA 608

Query: 61  KRLWREAQSKDPKNDVLKSTLDRLKVQL 88
           ++LWRE   KDP+ND LK+TL RL  +L
Sbjct: 609 QKLWREVLQKDPQNDALKNTLVRLGAKL 636