BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0015.p         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774484.1| hypothetical protein Hsero_1059 [Herbaspiril...   170   8e-41
ref|ZP_04760947.1| isomerase [Acidovorax delafieldii 2AN] >gi|24...   155   2e-36
ref|NP_902898.1| hypothetical protein CV_3228 [Chromobacterium v...   153   9e-36
ref|ZP_08400880.1| hypothetical protein RBXJA2T_02742 [Rubriviva...   149   1e-34
ref|YP_002354718.1| hypothetical protein Tmz1t_1060 [Thauera sp....   147   5e-34

>ref|YP_003774484.1| hypothetical protein Hsero_1059 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62576.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 139

 Score =  170 bits (430), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 99/132 (75%)

Query: 10  LDALAEWYVTLTRQSVRHIGQFYAPEVHFKDPFNDIRGIAAMIAVYEHMFDTTDHPHFII 69
           LD L +WY  L R S+  IG+FYAPE  FKDPFNDI+G+ ++  ++EHMF+TTD P F+I
Sbjct: 5   LDRLLQWYGALERSSLERIGEFYAPEAIFKDPFNDIKGLRSIRRIFEHMFETTDDPRFVI 64

Query: 70  HERIVAGDQAFITWVFHFGLKGKHYSIAGGTHLKFNQEGLVVLHRDYWDAAEELFQKLPV 129
            E++  GDQ F TW F F LKG+ Y++ G TH +F++ GLV  HRDYWDAAEEL+QKLP+
Sbjct: 65  LEQMGQGDQGFATWRFEFRLKGRFYTVLGATHFRFDEAGLVSEHRDYWDAAEELWQKLPL 124

Query: 130 IGGLIRWLRRLF 141
           IGG ++WLR  F
Sbjct: 125 IGGPVKWLRGKF 136


>ref|ZP_04760947.1| isomerase [Acidovorax delafieldii 2AN]
 gb|EER62264.1| isomerase [Acidovorax delafieldii 2AN]
          Length = 155

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 91/134 (67%), Gaps = 4/134 (2%)

Query: 10  LDALAEWYVTLTRQSVRHIGQFYAPEVHFKDPFNDIRGIAAMIAVYEHMFDTTDHPHFII 69
           ++ L  WY  LT   +R +  +Y P+  FKDPFND+RG+ A+  V+ HMF T D P F++
Sbjct: 18  IERLVHWYEHLTPDHLRTLDTYYTPDARFKDPFNDVRGVPAIAQVFAHMFTTLDQPRFVV 77

Query: 70  HERIVAGDQAFITWVFHFGLK----GKHYSIAGGTHLKFNQEGLVVLHRDYWDAAEELFQ 125
            ER+V G QAF+ W FHF  +    G    I G THL+FN+ GLV +HRDYWDAAEEL +
Sbjct: 78  TERVVQGQQAFLVWEFHFRFRRWRSGIPQCIGGATHLRFNESGLVAMHRDYWDAAEELHE 137

Query: 126 KLPVIGGLIRWLRR 139
           KLPV+G L+RWLRR
Sbjct: 138 KLPVVGTLMRWLRR 151


>ref|NP_902898.1| hypothetical protein CV_3228 [Chromobacterium violaceum ATCC 12472]
 gb|AAQ60893.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 144

 Score =  153 bits (386), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 94/139 (67%)

Query: 1   MTEMRLNDRLDALAEWYVTLTRQSVRHIGQFYAPEVHFKDPFNDIRGIAAMIAVYEHMFD 60
           M  +       AL +WY TLT  ++  IG++YA E  FKDPFND RG+A + AV+ HMF 
Sbjct: 1   MKRIPTQTEWQALLDWYQTLTPDTLPDIGRYYAEEARFKDPFNDARGVARIQAVFRHMFQ 60

Query: 61  TTDHPHFIIHERIVAGDQAFITWVFHFGLKGKHYSIAGGTHLKFNQEGLVVLHRDYWDAA 120
           T +HP F +   +  GDQAFITW FHF   G+  SI GG+HL+F+ +G + LHRDYWDAA
Sbjct: 61  TLEHPRFTVIHALRDGDQAFITWDFHFLYAGRQMSIHGGSHLQFDADGKITLHRDYWDAA 120

Query: 121 EELFQKLPVIGGLIRWLRR 139
           EELF+K+P+ G  + WLR+
Sbjct: 121 EELFEKIPLFGLPVAWLRK 139


>ref|ZP_08400880.1| hypothetical protein RBXJA2T_02742 [Rubrivivax benzoatilyticus JA2]
 gb|EGJ09213.1| hypothetical protein RBXJA2T_02742 [Rubrivivax benzoatilyticus JA2]
          Length = 148

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 97/142 (68%), Gaps = 3/142 (2%)

Query: 1   MTEMRLNDRLDALAEWYVTLTRQSVRHIGQFYAPEVHFKDPFNDIRGIAAMIAVYEHMFD 60
           M     + R+  L E + TL+  ++  +G+ YAP+  FKDPFN++RG+ A+ A++EHMF 
Sbjct: 3   MKSPHPDPRVQRLVEAFETLSPAALARLGEVYAPDAVFKDPFNEVRGVPAIAAIFEHMFR 62

Query: 61  TTDHPHFIIHERIVAGDQAFITWVFHFGLK---GKHYSIAGGTHLKFNQEGLVVLHRDYW 117
           + + P F++HE + +GDQ F+TW  H+ +K       +I G TH++F  +G VVLHRDYW
Sbjct: 63  SLEAPRFVVHEAVASGDQCFLTWDMHYRMKRFVQGEQTIRGATHVRFAADGRVVLHRDYW 122

Query: 118 DAAEELFQKLPVIGGLIRWLRR 139
           DAAEEL++KLP +G  +RWL+R
Sbjct: 123 DAAEELYEKLPAVGAAMRWLKR 144


>ref|YP_002354718.1| hypothetical protein Tmz1t_1060 [Thauera sp. MZ1T]
 gb|ACK53822.1| protein of unknown function DUF1486 [Thauera sp. MZ1T]
          Length = 159

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 90/127 (70%)

Query: 13  LAEWYVTLTRQSVRHIGQFYAPEVHFKDPFNDIRGIAAMIAVYEHMFDTTDHPHFIIHER 72
           LA +Y T T  ++  + Q YAP+  FKDPFN++ G AA+  ++ HMF TT+ P F + + 
Sbjct: 28  LARFYETFTPAALPGLDQLYAPDARFKDPFNEVAGTAAIRRIFAHMFATTEAPRFEVTDC 87

Query: 73  IVAGDQAFITWVFHFGLKGKHYSIAGGTHLKFNQEGLVVLHRDYWDAAEELFQKLPVIGG 132
           I  G+QA + W FHF L+G+   + G THL+F+ +G VVLHRDYWDAAEEL++KLP+IG 
Sbjct: 88  IEQGEQAMLGWAFHFALRGRPLVVRGVTHLRFDADGRVVLHRDYWDAAEELYEKLPLIGA 147

Query: 133 LIRWLRR 139
            +RWLRR
Sbjct: 148 PLRWLRR 154