BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0012.p         (181 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774482.1| lipoprotein [Herbaspirillum seropedicae SmR1...   248   2e-64
ref|YP_004714237.1| putative lipoprotein [Pseudomonas stutzeri A...   228   2e-58
gb|AEA83894.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166]   224   5e-57
ref|YP_348539.1| putative lipoprotein [Pseudomonas fluorescens P...   221   3e-56
ref|YP_002871081.1| hypothetical protein PFLU1433 [Pseudomonas f...   218   4e-55

>ref|YP_003774482.1| lipoprotein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62574.1| lipoprotein [Herbaspirillum seropedicae SmR1]
          Length = 189

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 127/158 (80%)

Query: 23  CAGTDVSHYAKNQPVFDLVQFFSGKTEAWGMFQKRGGEVVKRFHVEITGSEQGGKLTLDE 82
           CA   +S YA   PVFD   FF G+TEAWGMFQKRGGEV +RFHV +TGS +G  LTLDE
Sbjct: 30  CASQQLSDYAGKTPVFDPAVFFKGRTEAWGMFQKRGGEVARRFHVVVTGSVEGNTLTLDE 89

Query: 83  RFRYDDGTTQQRVWTLTRQADGSWRGTAGDVVGEAVGHAAGNALNWRYTLLLPVDGKTYE 142
           RFRYDDG TQ RVWTL RQ D SWRG AGDV+GEA+G  AGNAL+W YTLLLPV  K YE
Sbjct: 90  RFRYDDGETQTRVWTLVRQPDNSWRGRAGDVIGEAIGQTAGNALHWNYTLLLPVGEKQYE 149

Query: 143 MHMDDWMYQMDRHTLINRTSMSKFGLEVGQVTLFFRKQ 180
           M MDDWMYQMD  TLINRTSMSKFG+EVGQVTLFFRK+
Sbjct: 150 MQMDDWMYQMDERTLINRTSMSKFGIEVGQVTLFFRKE 187


>ref|YP_004714237.1| putative lipoprotein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
 gb|AEJ05148.1| putative lipoprotein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
          Length = 175

 Score =  228 bits (582), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/157 (68%), Positives = 122/157 (77%)

Query: 25  GTDVSHYAKNQPVFDLVQFFSGKTEAWGMFQKRGGEVVKRFHVEITGSEQGGKLTLDERF 84
             DV HY   +P  DL ++F G  +AWGMFQKR GEVVKRFHVEI GS  G KL LDE F
Sbjct: 18  AVDVEHYRDEEPQLDLRKYFVGTVDAWGMFQKRSGEVVKRFHVEIEGSLDGDKLILDEHF 77

Query: 85  RYDDGTTQQRVWTLTRQADGSWRGTAGDVVGEAVGHAAGNALNWRYTLLLPVDGKTYEMH 144
           RY DGTTQQRVWTLT ++ G WRGTA DVVGEAVG  AGNAL WRY L LPVD K Y++H
Sbjct: 78  RYSDGTTQQRVWTLTEKSPGHWRGTAADVVGEAVGEVAGNALRWRYVLSLPVDDKVYDVH 137

Query: 145 MDDWMYQMDRHTLINRTSMSKFGLEVGQVTLFFRKQD 181
           +DDWMY +D +TL NR+ MSKFG+EVGQVTLFFRK++
Sbjct: 138 LDDWMYLIDENTLANRSFMSKFGVEVGQVTLFFRKRN 174


>gb|AEA83894.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166]
          Length = 175

 Score =  224 bits (570), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 105/169 (62%), Positives = 121/169 (71%)

Query: 12  LPVVLLLLLGACAGTDVSHYAKNQPVFDLVQFFSGKTEAWGMFQKRGGEVVKRFHVEITG 71
           + + L LLL +C   DV HY   +P  DL  +F GK +AWGMFQKR GEVVKRF VEI G
Sbjct: 5   MTLALCLLLMSCTAVDVEHYRNEEPRLDLRDYFVGKVDAWGMFQKRSGEVVKRFRVEIDG 64

Query: 72  SEQGGKLTLDERFRYDDGTTQQRVWTLTRQADGSWRGTAGDVVGEAVGHAAGNALNWRYT 131
           S  G KL LDE FRY DGTTQ+RVWTLT    G WRGTA DV+GEA G  +GNAL WRY 
Sbjct: 65  SLDGDKLILDEYFRYSDGTTQRRVWTLTEDTPGRWRGTAADVIGEARGEVSGNALRWRYV 124

Query: 132 LLLPVDGKTYEMHMDDWMYQMDRHTLINRTSMSKFGLEVGQVTLFFRKQ 180
           L LPVD + Y +  DDWMY +D  TL NR+ MSKFG+E+GQVTLFFRK+
Sbjct: 125 LSLPVDDEVYRVDFDDWMYLIDEQTLANRSFMSKFGIELGQVTLFFRKR 173


>ref|YP_348539.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
 gb|ABA74549.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 180

 Score =  221 bits (564), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 116/161 (72%)

Query: 20  LGACAGTDVSHYAKNQPVFDLVQFFSGKTEAWGMFQKRGGEVVKRFHVEITGSEQGGKLT 79
           + +C   DVS YA  QP  DL +FFS   +AWGMFQKRGGEV KRF V I    +G  L 
Sbjct: 14  IASCTSVDVSRYADQQPTLDLQRFFSQPVKAWGMFQKRGGEVTKRFEVNIISRREGNNLI 73

Query: 80  LDERFRYDDGTTQQRVWTLTRQADGSWRGTAGDVVGEAVGHAAGNALNWRYTLLLPVDGK 139
           LDERF Y DGT Q RVWTLT + +G W G AGDVVG A G  AGN L+WRY L +PVD  
Sbjct: 74  LDERFLYSDGTRQHRVWTLTPEGEGRWSGRAGDVVGVAQGQVAGNTLHWRYRLNVPVDDS 133

Query: 140 TYEMHMDDWMYQMDRHTLINRTSMSKFGLEVGQVTLFFRKQ 180
           TYEM MDDWMY MD  TLINRTSMSKFG+EVGQVTLFFR+Q
Sbjct: 134 TYEMSMDDWMYLMDEDTLINRTSMSKFGVEVGQVTLFFRRQ 174


>ref|YP_002871081.1| hypothetical protein PFLU1433 [Pseudomonas fluorescens SBW25]
 emb|CAY47686.1| [utative exported protein [Pseudomonas fluorescens SBW25]
          Length = 174

 Score =  218 bits (554), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 104/158 (65%), Positives = 114/158 (72%)

Query: 23  CAGTDVSHYAKNQPVFDLVQFFSGKTEAWGMFQKRGGEVVKRFHVEITGSEQGGKLTLDE 82
           CA   V HYA  QP  DL +FFS   +AWG+FQKR GEV KRF V IT   +G  L LDE
Sbjct: 17  CANVGVEHYAGQQPQLDLERFFSKPVKAWGIFQKRSGEVAKRFEVNITSRREGNALILDE 76

Query: 83  RFRYDDGTTQQRVWTLTRQADGSWRGTAGDVVGEAVGHAAGNALNWRYTLLLPVDGKTYE 142
           RF Y DGT QQRVWTLT    G WRG AGDVVGEA+G  AGNAL WRY L LPVDG  YE
Sbjct: 77  RFLYSDGTRQQRVWTLTPDGPGHWRGRAGDVVGEAIGEVAGNALRWRYRLNLPVDGSVYE 136

Query: 143 MHMDDWMYQMDRHTLINRTSMSKFGLEVGQVTLFFRKQ 180
           +  DDWMY MD  TLINR+SM+KFG+E GQVTLFFR+Q
Sbjct: 137 VSFDDWMYLMDEDTLINRSSMTKFGVEWGQVTLFFRRQ 174