BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0003.p (725 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777342.1| 4-amino-4-deoxy-L-arabinose transferase tran... 527 e-147 ref|YP_002231494.1| hypothetical protein BCAL2370 [Burkholderia ... 358 3e-96 ref|ZP_02378329.1| 4-amino-4-deoxy-L-arabinose transferase and r... 351 3e-94 ref|ZP_04940953.1| hypothetical protein BCPG_02439 [Burkholderia... 350 6e-94 ref|YP_001765582.1| glycosyltransferase [Burkholderia cenocepaci... 349 1e-93 >ref|YP_003777342.1| 4-amino-4-deoxy-L-arabinose transferase transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65434.1| 4-amino-4-deoxy-L-arabinose transferase transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 584 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 265/403 (65%), Positives = 326/403 (80%) Query: 187 DGARVASVFFMLVTLLFVARIARAAWNEDGFLSARVLGTLALFAGTVGMIKHAHDMFTDV 246 +GAR+ASV + LVTL+FVARIA+ WNE LS VLGT+ALFAG+ GMIKHAHDMFTDV Sbjct: 112 EGARLASVLYNLVTLVFVARIAQLMWNERRVLSLPVLGTVALFAGSPGMIKHAHDMFTDV 171 Query: 247 ALVCGGAIAMYGLLHIALNEQRKTPRLSAALWFGLGVGIAEMSKGLFVPVIYAATALLVG 306 ALV GGA+A+YGLL IALNE+R+ P SAA WFGLGVGI +M+KGLFVP+ +AATA+ VG Sbjct: 172 ALVTGGAMAIYGLLAIALNEERRAPSWSAAFWFGLGVGITQMTKGLFVPLTFAATAMAVG 231 Query: 307 LLVRECRCRSYLRMVGLAVLVSLPFFLIWPVLLAQHSMPLFMEWFWDNNVGRFLGFSVKK 366 +LVR CR SY +MVG AVLVSLPFF++WP LLAQHS+PLFMEWFWDNNVGRF GFSV K Sbjct: 232 VLVRPCRSLSYWKMVGAAVLVSLPFFVVWPALLAQHSVPLFMEWFWDNNVGRFFGFSVYK 291 Query: 367 LGSDNDHTVIFRALTGFALPGAPLAVLAIAGGEWRKIRQPRVAIPVAFTAVCVTLLLMSA 426 LGSDNDHTVI RAL GFALPG+ LAVLA+A G+WR+ PRVA+P+AF A+ + +L SA Sbjct: 292 LGSDNDHTVILRALIGFALPGSVLAVLALATGDWRQTGSPRVALPLAFAAISLAVLQSSA 351 Query: 427 TARQLYLLPLILPLCVLGSAAINRLPDWAHLGWDWFARLFFGAMTALVWTIYVISIGPVE 486 TARQLYLLP++LPL +LG+ AI RLP+ HLGWDWF+R+ FG + A +W IYV+S P Sbjct: 352 TARQLYLLPVLLPLALLGARAIARLPNAFHLGWDWFSRIAFGVLAAAIWAIYVVSSLPAA 411 Query: 487 HHHYLSYLGRWLPLGFITPLQPLALGAATMMTLGWLCCLPRLKQCGKWRGALSWFAGLTL 546 HH++ ++G+WLPL F+TPLQPLAL AA M++ WL L +L+ G+WRGALSWFAG+TL Sbjct: 412 DHHWIDFMGQWLPLNFVTPLQPLALAAAVGMSVLWLWGLGQLRLAGQWRGALSWFAGITL 471 Query: 547 MWGVTYTLLLPWGDFAKSFEYVYARLSDRLKPEWRDGDCMXDR 589 MWG+ +TLLLPW D+ KS+E+VY L ++ +W+DGDCM Sbjct: 472 MWGLAFTLLLPWADYGKSYEFVYTDLKQQIAAQWQDGDCMASE 514 >ref|YP_002231494.1| hypothetical protein BCAL2370 [Burkholderia cenocepacia J2315] emb|CAR52671.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 630 Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 193/396 (48%), Positives = 250/396 (63%), Gaps = 12/396 (3%) Query: 203 FVARIARAAWNEDGFLSARVLGTLALFAGTVGMIKHAHDMFTDVALVCGGAIAMYGLL-- 260 F+AR AR A + + RVLG + L AGT+ +IKH HDM TDVAL G A+ GLL Sbjct: 155 FIARAARMASRTENWFDLRVLGPVVLSAGTLVVIKHVHDMMTDVALFAGTAMGFCGLLEL 214 Query: 261 ---HIALNEQRK--TPRLSAALW----FGLGVGIAEMSKGLFVPVIYAATALLVGLLVRE 311 H+A +Q + P A+ W FG GVGIA M+KGLFVP+++AAT + +L Sbjct: 215 VMQHVARAQQMRHGLPVHPASRWAAPLFGAGVGIALMAKGLFVPLVFAATLVCTLVLYPA 274 Query: 312 CRCRSYLRMVGLAVLVSLPFFLIWPVLLAQHSMPLFMEWFWDNNVGRFLGFSVKKLGSDN 371 CR RS+ R +G+A LV PF LIWP L S LFM+WFWDNNVGRF GFSV +LG++N Sbjct: 275 CRTRSFARALGIAALVFAPFALIWPTALFLRSETLFMKWFWDNNVGRFFGFSVPELGAEN 334 Query: 372 DHTV-IFRALTGFALPGAPLAVLAIAGGEWRKIRQPRVAIPVAFTAVCVTLLLMSATARQ 430 D + I RA P APLA++A+A G WR R P VA+PV F + + +L +SAT+RQ Sbjct: 335 DKPLFILRAFLTVGFPIAPLAIVALARGAWRDWRVPSVALPVLFAGIGLVVLQISATSRQ 394 Query: 431 LYLLPLILPLCVLGSAAINRLPDWAHLGWDWFARLFFGAMTALVWTIYVISIGPVEHHHY 490 LY+LP PL ++ + AI RLP HL WD+ +RL FG + L W I+ + P Sbjct: 395 LYILPFFAPLALVAAQAIERLPRRLHLAWDYLSRLLFGTVVVLAWAIWAVMADPAASRAD 454 Query: 491 LSYLGRWLPLGFITPLQPLALGAATMMTLGWLCCLPRLKQCGKWRGALSWFAGLTLMWGV 550 L+ LGRWLPL + P+QP + A +T+GWL LP+L+ G+WRGALSW AG + WG+ Sbjct: 455 LALLGRWLPLDWTMPIQPALVTGALALTVGWLTLLPKLRTTGRWRGALSWGAGALVAWGL 514 Query: 551 TYTLLLPWGDFAKSFEYVYARLSDRLKPEWRDGDCM 586 YTLLLPW D AKS+ V+ L+ L EW DGDCM Sbjct: 515 VYTLLLPWLDAAKSYRSVFDDLNAHLALEWNDGDCM 550 >ref|ZP_02378329.1| 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family protein [Burkholderia ubonensis Bu] Length = 590 Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 185/396 (46%), Positives = 246/396 (62%), Gaps = 12/396 (3%) Query: 203 FVARIARAAWNEDGFLSARVLGTLALFAGTVGMIKHAHDMFTDVALVCGGAIAMYGLLHI 262 F AR AR A G+ +V+G +AL A ++ ++KH HDM TDVAL G AIA GLL + Sbjct: 115 FTARAARVASGAAGWFDLKVIGPVALCASSLVVVKHVHDMMTDVALFAGTAIAFCGLLEL 174 Query: 263 ALNE-------QRKTPRLSAALW----FGLGVGIAEMSKGLFVPVIYAATALLVGLLVRE 311 + Q P W FG GVG+A M+KGLFVP+++ AT V L E Sbjct: 175 VMQHLARARHAQLGLPVGPGNRWAGPMFGAGVGVALMAKGLFVPLVFGATLTAVLALYPE 234 Query: 312 CRCRSYLRMVGLAVLVSLPFFLIWPVLLAQHSMPLFMEWFWDNNVGRFLGFSVKKLGSDN 371 CR R++ R +G+A LV PF +IWP L S LF+ WFWDNNVGRF GFSV +LG++N Sbjct: 235 CRTRAFARALGIAALVFAPFAIIWPTALLLRSETLFLTWFWDNNVGRFFGFSVPQLGAEN 294 Query: 372 DHTV-IFRALTGFALPGAPLAVLAIAGGEWRKIRQPRVAIPVAFTAVCVTLLLMSATARQ 430 D + I RA +P PLA++A+A G WR R PR+A+PV F V + +L +SAT+RQ Sbjct: 295 DKPLFILRAFLTVGIPVTPLAIVALARGAWRDWRAPRIALPVVFAGVGLAVLEVSATSRQ 354 Query: 431 LYLLPLILPLCVLGSAAINRLPDWAHLGWDWFARLFFGAMTALVWTIYVISIGPVEHHHY 490 LY+LP PL ++ + AI+RLP H+ WD+ +R FG++ L WTI+ + P H Sbjct: 355 LYILPFFAPLALVAAQAIDRLPQRLHVAWDYLSRALFGSIAVLAWTIWSVMADPAASHER 414 Query: 491 LSYLGRWLPLGFITPLQPLALGAATMMTLGWLCCLPRLKQCGKWRGALSWFAGLTLMWGV 550 L+ LGRWLPL + P++P + A +T+GWL LP L+ G+WRGALSW +G + WG+ Sbjct: 415 LAPLGRWLPLDWTMPIEPGLVLGALALTVGWLWLLPTLRTTGRWRGALSWASGAIVAWGL 474 Query: 551 TYTLLLPWGDFAKSFEYVYARLSDRLKPEWRDGDCM 586 YTLLLPW D AKS+ VY L+ L EW DGDCM Sbjct: 475 VYTLLLPWLDVAKSYRSVYEDLNAHLALEWNDGDCM 510 >ref|ZP_04940953.1| hypothetical protein BCPG_02439 [Burkholderia cenocepacia PC184] gb|EAY64124.1| hypothetical protein BCPG_02439 [Burkholderia cenocepacia PC184] Length = 625 Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 188/384 (48%), Positives = 241/384 (62%), Gaps = 12/384 (3%) Query: 215 DGFLSARVLGTLALFAGTVGMIKHAHDMFTDVALVCGGAIAMYGLL-----HIALNEQRK 269 D + RVLG + L AGT+ +IKH HDM TDVAL G AI GLL H+A +Q + Sbjct: 162 DTWFDLRVLGPVVLSAGTLVVIKHVHDMMTDVALFAGTAIGFCGLLELVMQHVAQAQQMR 221 Query: 270 --TPRLSAALW----FGLGVGIAEMSKGLFVPVIYAATALLVGLLVRECRCRSYLRMVGL 323 P A+ W FG GVGIA M+KGLFVP+++AAT + +L CR RS+ R +G+ Sbjct: 222 HGLPIHPASRWAAPIFGAGVGIALMAKGLFVPLVFAATLVCTLVLYPACRTRSFARALGV 281 Query: 324 AVLVSLPFFLIWPVLLAQHSMPLFMEWFWDNNVGRFLGFSVKKLGSDNDHTV-IFRALTG 382 A LV PF LIWP L S LFM WFWDNNVGRF GFSV +LG++ND I RA Sbjct: 282 AALVFAPFALIWPTALFLRSETLFMTWFWDNNVGRFFGFSVPELGAENDKPFFILRAFLT 341 Query: 383 FALPGAPLAVLAIAGGEWRKIRQPRVAIPVAFTAVCVTLLLMSATARQLYLLPLILPLCV 442 P APLA++A+A G WR R PR+A+PV F + + +L +SAT+RQLY+LP PL + Sbjct: 342 VGFPVAPLAIVALARGAWRDWRAPRIALPVLFAGIGLVVLQVSATSRQLYILPFFAPLAL 401 Query: 443 LGSAAINRLPDWAHLGWDWFARLFFGAMTALVWTIYVISIGPVEHHHYLSYLGRWLPLGF 502 + + AI RLP HL WD+ +R+ FG + L W I+ + P L+ LGRWLPL + Sbjct: 402 VAAQAIERLPRRLHLAWDYLSRILFGTVVVLAWAIWAVMADPAASRSDLALLGRWLPLDW 461 Query: 503 ITPLQPLALGAATMMTLGWLCCLPRLKQCGKWRGALSWFAGLTLMWGVTYTLLLPWGDFA 562 P+QP + A +T+GWL LP+L+ G WRGALSW AG + WG+ YTLLLPW D A Sbjct: 462 TMPIQPALVTGALALTVGWLTLLPKLRTTGLWRGALSWGAGAIVAWGLIYTLLLPWLDVA 521 Query: 563 KSFEYVYARLSDRLKPEWRDGDCM 586 KS+ V+ L+ L EW DGDCM Sbjct: 522 KSYRSVFDDLNAHLALEWNDGDCM 545 >ref|YP_001765582.1| glycosyltransferase [Burkholderia cenocepacia MC0-3] gb|ACA91460.1| 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family [Burkholderia cenocepacia MC0-3] Length = 630 Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 188/384 (48%), Positives = 240/384 (62%), Gaps = 12/384 (3%) Query: 215 DGFLSARVLGTLALFAGTVGMIKHAHDMFTDVALVCGGAIAMYGLL-----HIALNEQRK 269 D + RVLG + L AGT+ +IKH HDM TDVAL G AI GLL H+A +Q + Sbjct: 167 DTWFDLRVLGPVVLSAGTLVVIKHVHDMMTDVALFAGTAIGFCGLLELVMQHVARAQQMR 226 Query: 270 --TPRLSAALW----FGLGVGIAEMSKGLFVPVIYAATALLVGLLVRECRCRSYLRMVGL 323 P A W FG GVGIA M+KGLFVP+++AAT + +L CR RS+ R +G+ Sbjct: 227 HGLPVHPAGRWAAPIFGAGVGIALMAKGLFVPLVFAATLVCTLVLYPACRTRSFARALGV 286 Query: 324 AVLVSLPFFLIWPVLLAQHSMPLFMEWFWDNNVGRFLGFSVKKLGSDNDHTV-IFRALTG 382 A LV PF LIWP L S LFM WFWDNNVGRF GFSV +LG++ND I RA Sbjct: 287 AALVFAPFALIWPTALFLRSETLFMTWFWDNNVGRFFGFSVPELGAENDKPFFILRAFLT 346 Query: 383 FALPGAPLAVLAIAGGEWRKIRQPRVAIPVAFTAVCVTLLLMSATARQLYLLPLILPLCV 442 P APLA++A+A G WR R PR+A+PV F + + +L +SAT+RQLY+LP PL + Sbjct: 347 VGFPVAPLAIVALARGAWRDWRAPRIALPVLFAGIGLVVLQVSATSRQLYILPFFAPLAL 406 Query: 443 LGSAAINRLPDWAHLGWDWFARLFFGAMTALVWTIYVISIGPVEHHHYLSYLGRWLPLGF 502 + + AI RLP HL WD+ +R+ FG + L W I+ + P L+ LGRWLPL + Sbjct: 407 VAAQAIERLPRRLHLAWDYLSRILFGTVVVLAWAIWAVMADPAASRADLALLGRWLPLDW 466 Query: 503 ITPLQPLALGAATMMTLGWLCCLPRLKQCGKWRGALSWFAGLTLMWGVTYTLLLPWGDFA 562 P+QP + A +T+GWL LP+L+ G WRGALSW AG + WG+ YTLLLPW D A Sbjct: 467 TMPIQPALVTGALALTVGWLTLLPKLRTTGLWRGALSWGAGAIVAWGLIYTLLLPWLDVA 526 Query: 563 KSFEYVYARLSDRLKPEWRDGDCM 586 KS+ V+ L+ L EW DGDCM Sbjct: 527 KSYRSVFDDLNAHLALEWNDGDCM 550