BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0201.p         (61 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001354242.1| 50S ribosomal protein L28 [Janthinobacterium...    77   8e-13
ref|YP_003774608.1| 50S ribosomal protein L28 [Herbaspirillum se...    77   9e-13
ref|YP_004751888.1| 50S ribosomal protein L28p [Collimonas fungi...    77   9e-13
gb|ABW82958.1| 50S ribosomal protein L28 [uncultured bacterium p...    77   9e-13
ref|YP_001100718.1| 50S ribosomal protein L28 [Herminiimonas ars...    77   9e-13

>ref|YP_001354242.1| 50S ribosomal protein L28 [Janthinobacterium sp. Marseille]
 gb|ABR91603.1| 50S ribosomal protein L28 [Janthinobacterium sp. Marseille]
          Length = 112

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 47 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 82


>ref|YP_003774608.1| 50S ribosomal protein L28 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62700.1| 50S ribosomal subunit L28 protein [Herbaspirillum seropedicae
          SmR1]
          Length = 78

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48


>ref|YP_004751888.1| 50S ribosomal protein L28p [Collimonas fungivorans Ter331]
 gb|AEK61065.1| LSU ribosomal protein L28p [Collimonas fungivorans Ter331]
          Length = 78

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48


>gb|ABW82958.1| 50S ribosomal protein L28 [uncultured bacterium pEAF66]
          Length = 78

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48


>ref|YP_001100718.1| 50S ribosomal protein L28 [Herminiimonas arsenicoxydans]
 sp|A4G7W0.1|RL28_HERAR RecName: Full=50S ribosomal protein L28
 emb|CAL62597.1| 50S ribosomal subunit protein L28 [Herminiimonas arsenicoxydans]
          Length = 78

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48