BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0194.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773614.1| branched-chain amino acid ABC transporter AT... 263 1e-68 ref|YP_004751895.1| branched-chain amino acid transport ATP-bind... 245 3e-63 ref|YP_001354235.1| ABC-type branched-chain amino acid transport... 241 7e-62 ref|YP_001100711.1| high-affinity branched-chain amino acid ABC ... 239 3e-61 ref|ZP_08275507.1| Branched-chain amino acid transport ATP-bindi... 238 5e-61 >ref|YP_003773614.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] ref|YP_003774616.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ61706.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] gb|ADJ62708.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 127/150 (84%), Positives = 136/150 (90%) Query: 1 MTTNILKIEDLSVAYGGIKAVKGASLEVNEGELVTLIGANGAGKTTTLKAVTGTLPDSKV 60 MTTNILK++ LSVAYGGI+AVKG LEVNEGELVTLIGANGAGKTTTLKA+TGTLP S+V Sbjct: 1 MTTNILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRV 60 Query: 61 QGHISYLGQPLKGQSSFSLVQKKLAMVPEGRGVFTRMSIHENLLMGAYTSDDKQQIAQDI 120 +GHI YLGQPLKG+ SF LV+ KLAMVPEGRGVFTRMSI ENLLMGAYTSDDK QIA DI Sbjct: 61 EGHIEYLGQPLKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADI 120 Query: 121 EHWFTVFPRLKERAGQMAGTLSGGEQQMLA 150 + WF VFPRLKERA QMAGTLSGGEQQMLA Sbjct: 121 DKWFAVFPRLKERAAQMAGTLSGGEQQMLA 150 >ref|YP_004751895.1| branched-chain amino acid transport ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK61072.1| Branched-chain amino acid transport ATP-binding protein [Collimonas fungivorans Ter331] Length = 240 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 119/150 (79%), Positives = 132/150 (88%) Query: 1 MTTNILKIEDLSVAYGGIKAVKGASLEVNEGELVTLIGANGAGKTTTLKAVTGTLPDSKV 60 M TNILK+E+L VAYGGI+AVKG +LEVNEGELVTLIGANGAGKTTTLKA+TGTLP KV Sbjct: 1 MATNILKVENLKVAYGGIQAVKGINLEVNEGELVTLIGANGAGKTTTLKAITGTLPQCKV 60 Query: 61 QGHISYLGQPLKGQSSFSLVQKKLAMVPEGRGVFTRMSIHENLLMGAYTSDDKQQIAQDI 120 +G + YLG+ KG +SF+LV++KLAMVPEGRGVFTRMSI ENLLMGAYT DDK IA DI Sbjct: 61 EGEMHYLGEHTKGMTSFNLVKQKLAMVPEGRGVFTRMSIQENLLMGAYTRDDKAGIAADI 120 Query: 121 EHWFTVFPRLKERAGQMAGTLSGGEQQMLA 150 + WF VFPRLKERA QMAGTLSGGEQQMLA Sbjct: 121 DKWFGVFPRLKERAAQMAGTLSGGEQQMLA 150 >ref|YP_001354235.1| ABC-type branched-chain amino acid transport system ATP-binding protein [Janthinobacterium sp. Marseille] gb|ABR88852.1| ABC-type branched-chain amino acid transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 241 Score = 241 bits (614), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 116/150 (77%), Positives = 129/150 (86%) Query: 1 MTTNILKIEDLSVAYGGIKAVKGASLEVNEGELVTLIGANGAGKTTTLKAVTGTLPDSKV 60 MT +LKI L VAYGGI+AVKG LEV++GEL+TLIGANGAGKTTTLKA+TGTLP+ +V Sbjct: 1 MTDTVLKISGLKVAYGGIEAVKGVDLEVHKGELITLIGANGAGKTTTLKAITGTLPNCRV 60 Query: 61 QGHISYLGQPLKGQSSFSLVQKKLAMVPEGRGVFTRMSIHENLLMGAYTSDDKQQIAQDI 120 +GHI Y GQP+KG SF LV+KKLAMVPEGRGVFTRMSI ENLLMGA+T DDK IA DI Sbjct: 61 EGHIEYAGQPIKGLHSFELVRKKLAMVPEGRGVFTRMSIQENLLMGAFTRDDKDGIAADI 120 Query: 121 EHWFTVFPRLKERAGQMAGTLSGGEQQMLA 150 + WF VFPRLKERA QMAGTLSGGEQQMLA Sbjct: 121 DKWFGVFPRLKERAAQMAGTLSGGEQQMLA 150 >ref|YP_001100711.1| high-affinity branched-chain amino acid ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] emb|CAL62590.1| High-affinity branched-chain amino acid transport ATP-binding protein [Herminiimonas arsenicoxydans] Length = 241 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 115/150 (76%), Positives = 128/150 (85%) Query: 1 MTTNILKIEDLSVAYGGIKAVKGASLEVNEGELVTLIGANGAGKTTTLKAVTGTLPDSKV 60 MTT +LKI L VAYGGI+AVKG L+V +GEL+TLIGANGAGKTTTLKA+TGTLP+ +V Sbjct: 1 MTTTVLKIAGLKVAYGGIQAVKGIDLDVRQGELITLIGANGAGKTTTLKAITGTLPECRV 60 Query: 61 QGHISYLGQPLKGQSSFSLVQKKLAMVPEGRGVFTRMSIHENLLMGAYTSDDKQQIAQDI 120 GHI Y GQ +KG SF LV+KKLAMVPEGRGVFTRMSI ENLLMGA+T +DKQ IA D+ Sbjct: 61 DGHIEYAGQAIKGLGSFELVRKKLAMVPEGRGVFTRMSIQENLLMGAFTRNDKQGIADDM 120 Query: 121 EHWFTVFPRLKERAGQMAGTLSGGEQQMLA 150 E WF VFPRLKERA QMAGTLSGGEQQMLA Sbjct: 121 EKWFAVFPRLKERAAQMAGTLSGGEQQMLA 150 >ref|ZP_08275507.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] gb|EGF31028.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] Length = 250 Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 113/150 (75%), Positives = 128/150 (85%) Query: 1 MTTNILKIEDLSVAYGGIKAVKGASLEVNEGELVTLIGANGAGKTTTLKAVTGTLPDSKV 60 M N+L+I L VAYGGI+AVKG LEVN+GEL+TLIGANGAGKTTTLKA+TGTLP+ +V Sbjct: 10 MRENVLRISGLKVAYGGIQAVKGIDLEVNKGELITLIGANGAGKTTTLKAITGTLPNCRV 69 Query: 61 QGHISYLGQPLKGQSSFSLVQKKLAMVPEGRGVFTRMSIHENLLMGAYTSDDKQQIAQDI 120 +GHI Y G+ +KG SF LV+K LAMVPEGRGVFTRMSIHENLLMGAYT +DK I+ DI Sbjct: 70 EGHIEYAGEAIKGIGSFDLVKKNLAMVPEGRGVFTRMSIHENLLMGAYTRNDKAGISDDI 129 Query: 121 EHWFTVFPRLKERAGQMAGTLSGGEQQMLA 150 + WF VFPRLKERA QMAGTLSGGEQQMLA Sbjct: 130 DKWFAVFPRLKERAAQMAGTLSGGEQQMLA 159