BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0185.p (330 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773615.1| bifunctional proline dehydrogenase/proline o... 443 e-122 ref|YP_004755062.1| multifunctional transcriptional repressor of... 412 e-113 ref|ZP_08275027.1| Proline dehydrogenase [Oxalobacteraceae bacte... 406 e-111 ref|YP_001100402.1| multifunctional: transcriptional repressor o... 322 4e-86 ref|YP_001353009.1| bifunctional proline dehydrogenase /delta-1-... 320 2e-85 >ref|YP_003773615.1| bifunctional proline dehydrogenase/proline oxidase delta-1-pyrroline-5-carboxylate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ61707.1| bifunctional enzyme: proline dehydrogenase/proline oxidase delta-1-pyrroline-5-carboxylate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 1230 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 228/334 (68%), Positives = 258/334 (77%), Gaps = 4/334 (1%) Query: 1 LLAHVEQMKKGGK-VYQLPLDERHQYGTYVAPTVIEIDSIAQLKREVFGPVLHVLRYRRD 59 LL H+E+M+ + V+QLPL E Q+GT+VAPTVIEID +AQL+REVFGPVLHVLRYRRD Sbjct: 897 LLDHIERMRASARAVHQLPLGEECQHGTFVAPTVIEIDDLAQLQREVFGPVLHVLRYRRD 956 Query: 60 QLPQLIDTINASGYGLTLGVHSRIDETIAFVAERAHVGNIYVNRNIVGAVVGVQPFGGEG 119 LPQLID INA+GYGLTLGVHSRIDETI FVA+RAHVGNIYVNRNIVGAVVGVQPFGGEG Sbjct: 957 ALPQLIDAINATGYGLTLGVHSRIDETIEFVAQRAHVGNIYVNRNIVGAVVGVQPFGGEG 1016 Query: 120 KSGTGPKAGGPLYLKRLQRHADVKLFNDAAQAASQP---LKSLLDWAATHGHAKLAQLGA 176 KSGTGPKAGGPLYLKRLQR+A + AQ A P L SLLDWA THGH +LA G Sbjct: 1017 KSGTGPKAGGPLYLKRLQRNAQLHEELTRAQPADVPNALLDSLLDWARTHGHERLAANGQ 1076 Query: 177 TYVQESLLHRTLTLPGPTGERNTLSFAPRGKILCAAADVAALLNQVAAVLATGNIAVVPA 236 Y ++SLL R+L LPGPTGERNTL FAPRG +LCAA V LLNQ+AA ATGN A+V Sbjct: 1077 RYHRDSLLQRSLVLPGPTGERNTLGFAPRGLVLCAAGSVGTLLNQLAAAFATGNTALVDE 1136 Query: 237 AQGKLIPAGLPAEARQAIELSGDVAALDLHLALVDGPVITQWRGLLAARDGALVPLVPTA 296 ++P+GLPA R AI + + A L ALVD WR LAAR+GALVPL+ Sbjct: 1137 RSAAILPSGLPAPVRAAIRRASQLDAEPLQAALVDSHQAAHWRARLAAREGALVPLILCG 1196 Query: 297 EDLPIDLWRLVAERALCVNTTAAGGNASLMTLSV 330 ED I LWRL+AERALC+NTTAAGGNASLMT+SV Sbjct: 1197 EDTTIPLWRLLAERALCINTTAAGGNASLMTISV 1230 >ref|YP_004755062.1| multifunctional transcriptional repressor of proline utilization/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK64239.1| multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase [Collimonas fungivorans Ter331] Length = 1207 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 219/343 (63%), Positives = 255/343 (74%), Gaps = 15/343 (4%) Query: 1 LLAHVEQMKKGGK-VYQLPLDERHQYGTYVAPTVIEIDSIAQLKREVFGPVLHVLRYRRD 59 LLAH+E M+ K YQLPL +GT+VAPT+IEI S+++LKREVFGPVLHVLRY R+ Sbjct: 863 LLAHIETMRATAKDFYQLPLPPEQHHGTFVAPTLIEIGSMSELKREVFGPVLHVLRYARN 922 Query: 60 QLPQLIDTINASGYGLTLGVHSRIDETIAFVAERAHVGNIYVNRNIVGAVVGVQPFGGEG 119 +LPQL+D IN SGYGLTLG+HSRIDETI F+ RAHVGNIYVNRNIVGAVVGVQPFGGEG Sbjct: 923 ELPQLVDAINGSGYGLTLGIHSRIDETIDFIVARAHVGNIYVNRNIVGAVVGVQPFGGEG 982 Query: 120 KSGTGPKAGGPLYLKRLQRHADVKLF-------NDAAQAASQPLKSLLDWAATHGHAKLA 172 KSGTGPKAGGPLYLKRLQR+ V L N A A+ L++LL WA THGH ++A Sbjct: 983 KSGTGPKAGGPLYLKRLQRNPAVSLGAHTIHAPNPEAANATPVLQALLSWARTHGHQRIA 1042 Query: 173 QLGATYVQESLLHRTLTLPGPTGERNTLSFAPRGKILCAAADVAALLNQVAAVLATGNIA 232 LG Y+ S L +L LPGPTGERN+LSFAPRG ILC+A +V A+LNQ+AAV ATGN+ Sbjct: 1043 ALGEEYMHASWLGTSLVLPGPTGERNSLSFAPRGAILCSADNVGAMLNQLAAVFATGNLP 1102 Query: 233 VVPAAQGKLIPAGLPAEARQAI----ELSGDVAALDLHLALVDGPVITQWRGLLAA---R 285 VV A +IP GLP R AI +L+G A L LALVDG + R LL A + Sbjct: 1103 VVEAGSSAMIPEGLPRAVRAAIRVVDQLAGSDHATRLQLALVDGAGTVRLRPLLTALGEQ 1162 Query: 286 DGALVPLVPTAEDLPIDLWRLVAERALCVNTTAAGGNASLMTL 328 GALVPL+ T+E I LWRL+AERA+CVNTTAAGGNASLMTL Sbjct: 1163 SGALVPLLETSEYASIPLWRLLAERAVCVNTTAAGGNASLMTL 1205 >ref|ZP_08275027.1| Proline dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31501.1| Proline dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 578 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/338 (61%), Positives = 254/338 (75%), Gaps = 8/338 (2%) Query: 1 LLAHVEQMKKGGK-VYQLPLDERHQYGTYVAPTVIEIDSIAQLKREVFGPVLHVLRYRRD 59 LL+H+E MKK + V+QLPL E Q+GT+V PT+IEIDS+++L EVFGPVLHVLRY R Sbjct: 241 LLSHIEHMKKSARAVFQLPLPESAQHGTFVPPTIIEIDSLSELTHEVFGPVLHVLRYERS 300 Query: 60 QLPQLIDTINASGYGLTLGVHSRIDETIAFVAERAHVGNIYVNRNIVGAVVGVQPFGGEG 119 LPQ++D INA+GYGLT G+HSRIDETI FV+ R H GN+YVNRNIVGAVVGVQPFGGEG Sbjct: 301 DLPQVVDAINATGYGLTFGIHSRIDETIDFVSNRIHAGNVYVNRNIVGAVVGVQPFGGEG 360 Query: 120 KSGTGPKAGGPLYLKRLQRHADVKL-----FNDAAQAASQPLKSLLDWAATHGHAKLAQL 174 KSGTGPKAGGPLYL+RLQR + +L +D ++ + + L WA+ HGH ++ L Sbjct: 361 KSGTGPKAGGPLYLQRLQRLSGGELTTPVVIHDPGVVSTPVVHAFLAWASAHGHDTISGL 420 Query: 175 GATYVQESLLHRTLTLPGPTGERNTLSFAPRGKILCAAADVAALLNQVAAVLATGNIAVV 234 G Y++ SLL TL LPGPTGERNTLSFA RG++LCAA +V+ALLNQ+ AVLATGN V+ Sbjct: 421 GEHYLRCSLLGSTLVLPGPTGERNTLSFAARGEVLCAATNVSALLNQLVAVLATGNTPVM 480 Query: 235 PAAQGKLIPAGLPAEARQAIELSGDVAALD--LHLALVDGPVITQWRGLLAARDGALVPL 292 A +PAGLP E RQ I+ D+ D L +AL+D ++ + R LAAR+GALVPL Sbjct: 481 LATTAARLPAGLPLEVRQLIKDMKDINDEDQPLQIALIDTLLVAEMRLALAARNGALVPL 540 Query: 293 VPTAEDLPIDLWRLVAERALCVNTTAAGGNASLMTLSV 330 V T + I LWRLV+ERA+C NTTAAGGNASLMTL V Sbjct: 541 VETTGLVSIPLWRLVSERAMCSNTTAAGGNASLMTLEV 578 >ref|YP_001100402.1| multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase [Herminiimonas arsenicoxydans] emb|CAL62279.1| Bifunctional protein putA: Proline dehydrogenase (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)] [Herminiimonas arsenicoxydans] Length = 1224 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 185/341 (54%), Positives = 224/341 (65%), Gaps = 11/341 (3%) Query: 1 LLAHVEQM-KKGGKVYQLPLDERHQYGTYVAPTVIEIDSIAQLKREVFGPVLHVLRYRRD 59 L A++EQ ++ + QL L GT+VAP +IEID ++ L+REVFGPVLHVLRYRRD Sbjct: 884 LRAYIEQAGRRAKNMKQLALPSTGTQGTFVAPCIIEIDRMSDLQREVFGPVLHVLRYRRD 943 Query: 60 QLPQLIDTINASGYGLTLGVHSRIDETIAFVAERAHVGNIYVNRNIVGAVVGVQPFGGEG 119 LPQL+ INA+G+GLTLGVHSRIDETI ++ + A VGNIYVNRNI+GAVVGVQPFGGEG Sbjct: 944 DLPQLVRDINATGFGLTLGVHSRIDETINYIVDHARVGNIYVNRNIIGAVVGVQPFGGEG 1003 Query: 120 KSGTGPKAGGPLYLKRLQRH--ADVKLFN-DAAQAASQP-----LKSLLDWAATHGHAKL 171 SGTGPKAGGPLY+KRLQ+ A + N D A P L LL W+ H H +L Sbjct: 1004 LSGTGPKAGGPLYMKRLQQEVGAIRNMENKDTEFTAETPQMQLVLAELLSWSLAHRHQQL 1063 Query: 172 AQLGATYVQESLLHRTLTLPGPTGERNTLSFAPRGKILCAAADVAALLNQVAAVLATGNI 231 + L Y SL + L L GPTGE NTL F RG +LC A ALLNQ+AAV A+GN Sbjct: 1064 SDLIRHYSSNSLYGKVLRLQGPTGELNTLRFVARGSVLCVAETAPALLNQLAAVYASGNQ 1123 Query: 232 AVVPAAQGKLIPAGLPAEARQAIE-LSGDVAALDLHLALVDGPV-ITQWRGLLAARDGAL 289 AV+ + +P PA R + + DL LAL++ R LAARDGA+ Sbjct: 1124 AVLFQSTAMHVPTDFPARLRAGMTIIEHQHECRDLKLALLEREQHALALRTALAARDGAI 1183 Query: 290 VPLVPTAEDLPIDLWRLVAERALCVNTTAAGGNASLMTLSV 330 VP+V T I LWRL+ ERALCVNTTAAGGNASLMT++ Sbjct: 1184 VPVVTTNFQQAIPLWRLINERALCVNTTAAGGNASLMTIAT 1224 >ref|YP_001353009.1| bifunctional proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR89114.1| bifunctional proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase [Janthinobacterium sp. Marseille] Length = 1242 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 184/340 (54%), Positives = 225/340 (66%), Gaps = 13/340 (3%) Query: 1 LLAHVEQMKKGGK-VYQLPLDERHQYGTYVAPTVIEIDSIAQLKREVFGPVLHVLRYRRD 59 L A++ Q + GK V QLPL + G++VAP +IEI I +L+REVFGPVLHVLRYRRD Sbjct: 904 LQAYIRQAQAAGKQVRQLPLPVTN--GSFVAPCIIEIADINELQREVFGPVLHVLRYRRD 961 Query: 60 QLPQLIDTINASGYGLTLGVHSRIDETIAFVAERAHVGNIYVNRNIVGAVVGVQPFGGEG 119 LPQL+ IN++G+GLTLG+H+RIDETI +V A VGNIYVNRNIVGAVVGVQPFGGEG Sbjct: 962 DLPQLLMDINSTGFGLTLGIHTRIDETIDYVVRHAQVGNIYVNRNIVGAVVGVQPFGGEG 1021 Query: 120 KSGTGPKAGGPLYLKRLQRHA------DVKLFNDAAQAA--SQPLKSLLDWAATHGHAKL 171 SGTGPKAGGPLYLKRLQR + VK DA + L L W+ H +L Sbjct: 1022 LSGTGPKAGGPLYLKRLQRESISLAGIAVKGDEDADETKQMQSTLTEFLLWSMKHKQQEL 1081 Query: 172 AQLGATYVQESLLHRTLTLPGPTGERNTLSFAPRGKILCAAADVAALLNQVAAVLATGNI 231 ++L A Y SL +T+ L G TGE NTL F+ RG +LC A ALL+Q+ AV ATGN Sbjct: 1082 SKLIAEYAHTSLYGKTMQLQGVTGELNTLHFSARGAVLCVAETTQALLHQLVAVYATGNQ 1141 Query: 232 AVVPAAQGKLIPAGLPAEAR-QAIELSGDVAALDLHLALVD-GPVITQWRGLLAARDGAL 289 V+ + L+PA P R I + + +L LAL++ G R LAAR GA+ Sbjct: 1142 VVLLQSTALLLPADFPTLLRADMIVIEQQHESGELRLALLEQGQHKPDLRTALAARRGAI 1201 Query: 290 VPLVPTAEDLPIDLWRLVAERALCVNTTAAGGNASLMTLS 329 V +V T+ I LWRLV ERALC+NTTAAGGNASLMT+S Sbjct: 1202 VSVVSTSFPHAIPLWRLVTERALCINTTAAGGNASLMTIS 1241