BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0181.p         (65 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773618.1| hypothetical protein Hsero_0184 [Herbaspiril...    80   1e-13
ref|YP_001101199.1| hypothetical protein HEAR2968 [Herminiimonas...    76   2e-12
ref|YP_001354905.1| hypothetical protein mma_3215 [Janthinobacte...    75   3e-12

>ref|YP_003773618.1| hypothetical protein Hsero_0184 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61710.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 67

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 50/61 (81%), Gaps = 3/61 (4%)

Query: 1  MANKTLGTRQKLSFRIEPSQLAKPRNPVAVAAKQRA--AGPHRKTASAVRQSARREVKKK 58
          MANKTLGTRQKLS+RIEPSQ +KPRNPVA+AA+QRA  AGPHRK+ +  RQ  R  + KK
Sbjct: 1  MANKTLGTRQKLSYRIEPSQ-SKPRNPVALAAQQRAGGAGPHRKSEATQRQQGRSALLKK 59

Query: 59 L 59
          L
Sbjct: 60 L 60


>ref|YP_001101199.1| hypothetical protein HEAR2968 [Herminiimonas arsenicoxydans]
 emb|CAL63078.1| Hypothetical protein HEAR2968 [Herminiimonas arsenicoxydans]
          Length = 72

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 1  MANKTLGTRQKLSFRIEPSQLA-KPRNPVAVAAKQRAAGPHRKTASAVRQSARREVKKKL 59
          MANK L  RQKL+ RIEPSQ A KPRN +A+AAKQR AGPH+K+ SA RQ  +R +K KL
Sbjct: 7  MANKALAKRQKLTIRIEPSQQALKPRNYLALAAKQRVAGPHQKSISAQRQVQKRLLKIKL 66

Query: 60 DEPSQ 64
           EP +
Sbjct: 67 SEPDE 71


>ref|YP_001354905.1| hypothetical protein mma_3215 [Janthinobacterium sp. Marseille]
 gb|ABR91800.1| Uncharacterized conserved protein [Janthinobacterium sp.
          Marseille]
          Length = 66

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 1  MANKTLGTRQKLSFRIEPSQLA-KPRNPVAVAAKQRAAGPHRKTASAVRQSARREVKKKL 59
          MANK L  RQKL+ RIEPSQ A KPRN VA+AAKQR  GPH+K+ S  RQ  +R +K KL
Sbjct: 1  MANKALAKRQKLTIRIEPSQKALKPRNHVALAAKQRVGGPHQKSVSGQRQELKRLLKTKL 60

Query: 60 DEPSQD 65
           EP + 
Sbjct: 61 SEPEEQ 66