BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0180.p         (160 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773622.1| general secretion pathway protein [Herbaspir...   161   2e-38
ref|NP_903481.1| general secretion pathway protein G [Chromobact...   127   8e-28
gb|EGD00428.1| general secretion pathway protein G [Burkholderia...   125   2e-27
ref|YP_001578251.1| general secretion pathway protein G [Burkhol...   125   2e-27
ref|ZP_06840417.1| general secretion pathway protein G [Burkhold...   125   2e-27

>ref|YP_003773622.1| general secretion pathway protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ61714.1| general secretion pathway protein [Herbaspirillum seropedicae SmR1]
          Length = 183

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 105/153 (68%)

Query: 4   TVTRPVSPTQLLTQFFSLQRGLSKLQMLTALAIIAVVAIVAAPRLINVVNHAHSPQIVTA 63
           ++ R + P++    F  LQRGL++L+ +  L ++AV A +  P L+   NH HSPQ   A
Sbjct: 28  SMRRSLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAA 87

Query: 64  EQDIAEIEKGLQLYKQDNGRYPTIEQGLLALIVKPGRAPVPKEWKTGGYLDRLPRDPWGN 123
           E+D+  I  GL+ Y+QDNGRYP+ +QGLLAL+++P R P+   W+ GGY++RLPRDPWGN
Sbjct: 88  EKDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGN 147

Query: 124 AYAYRVSADGDSFDVFSFGAHGPDEGDDNAGVI 156
            Y Y+   DG S+++FSFG  GP+ GDD+  VI
Sbjct: 148 PYQYQADDDGASYELFSFGQAGPEGGDDDDRVI 180


>ref|NP_903481.1| general secretion pathway protein G [Chromobacterium violaceum ATCC
           12472]
 gb|AAQ61473.1| general secretion pathway protein G [Chromobacterium violaceum ATCC
           12472]
          Length = 147

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 87/131 (66%), Gaps = 3/131 (2%)

Query: 22  QRGLSKLQMLTALAIIAVVAIVAAPRLINVVNHAHSPQIVTAEQDIAEIEKGLQLYKQDN 81
           QRG + ++++  + I+ V+A +  P++++  + A   +IV A+QDI  I + L+LY+ DN
Sbjct: 9   QRGFTLIEIMVVIVILGVLAALVVPKVMSRPDEA---RIVAAKQDIGAISQALKLYRLDN 65

Query: 82  GRYPTIEQGLLALIVKPGRAPVPKEWKTGGYLDRLPRDPWGNAYAYRVSADGDSFDVFSF 141
           GRYP+ +QGL AL+ KP  AP PK WK GGYL+RLP+DPWGNAY Y         D++SF
Sbjct: 66  GRYPSTDQGLSALVQKPTAAPEPKNWKPGGYLERLPKDPWGNAYQYANPGTHGEIDIWSF 125

Query: 142 GAHGPDEGDDN 152
           GA G   G+ N
Sbjct: 126 GADGEPGGEGN 136


>gb|EGD00428.1| general secretion pathway protein G [Burkholderia sp. TJI49]
          Length = 150

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 3/131 (2%)

Query: 22  QRGLSKLQMLTALAIIAVVAIVAAPRLINVVNHAHSPQIVTAEQDIAEIEKGLQLYKQDN 81
           QRG + ++++  +AI+ ++A +  P++++  + A     + A+QDI  I + L+LY+ DN
Sbjct: 15  QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARR---IAAKQDIGTIMQALKLYRLDN 71

Query: 82  GRYPTIEQGLLALIVKPGRAPVPKEWKTGGYLDRLPRDPWGNAYAYRVSADGDSFDVFSF 141
           GRYPT EQGL ALI KP   P+P  WK GGYL+RLP DPWGNAY Y         DVFS+
Sbjct: 72  GRYPTQEQGLNALIQKPSTDPIPNNWKDGGYLERLPNDPWGNAYKYLNPGVHGEIDVFSY 131

Query: 142 GAHGPDEGDDN 152
           GA G + G+ N
Sbjct: 132 GADGKEGGEGN 142


>ref|YP_001578251.1| general secretion pathway protein G [Burkholderia multivorans ATCC
           17616]
 ref|YP_001944532.1| general secretion pathway protein G [Burkholderia multivorans ATCC
           17616]
 gb|ABX13754.1| general secretion pathway protein G [Burkholderia multivorans ATCC
           17616]
 dbj|BAG41996.1| general secretion pathway protein G [Burkholderia multivorans ATCC
           17616]
          Length = 150

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 84/131 (64%), Gaps = 3/131 (2%)

Query: 22  QRGLSKLQMLTALAIIAVVAIVAAPRLINVVNHAHSPQIVTAEQDIAEIEKGLQLYKQDN 81
           QRG + ++++  +AI+ ++A +  P++++  + A     + A+QDI  I + L+LY+ DN
Sbjct: 15  QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARR---IAAKQDIGTIMQALKLYRLDN 71

Query: 82  GRYPTIEQGLLALIVKPGRAPVPKEWKTGGYLDRLPRDPWGNAYAYRVSADGDSFDVFSF 141
           GRYPT EQGL ALI KP   P+P  WK GGYL+RLP DPWGN Y Y         DVFS+
Sbjct: 72  GRYPTQEQGLNALIQKPSTDPIPNNWKDGGYLERLPNDPWGNPYKYLNPGVHGEIDVFSY 131

Query: 142 GAHGPDEGDDN 152
           GA G + GD N
Sbjct: 132 GADGKEGGDGN 142


>ref|ZP_06840417.1| general secretion pathway protein G [Burkholderia sp. Ch1-1]
 gb|EFG72137.1| general secretion pathway protein G [Burkholderia sp. Ch1-1]
          Length = 154

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 84/131 (64%), Gaps = 3/131 (2%)

Query: 22  QRGLSKLQMLTALAIIAVVAIVAAPRLINVVNHAHSPQIVTAEQDIAEIEKGLQLYKQDN 81
           QRG + ++++  +AI+ ++A +  P++++  + A     V A+QDI  + + L+LY+ DN
Sbjct: 19  QRGFTLIEIMVVIAILGILAALIVPKIMSRPDEARR---VAAKQDIGTVMQALKLYRLDN 75

Query: 82  GRYPTIEQGLLALIVKPGRAPVPKEWKTGGYLDRLPRDPWGNAYAYRVSADGDSFDVFSF 141
           GRYPT EQGL ALI KP   PVP  WK GGYL+RLP DPWGNAY Y         DVFS+
Sbjct: 76  GRYPTQEQGLRALIEKPSTDPVPNNWKDGGYLERLPNDPWGNAYQYLNPGVHGEIDVFSY 135

Query: 142 GAHGPDEGDDN 152
           GA G   G+ N
Sbjct: 136 GADGKAGGEGN 146