BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0175.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774391.1| glycerol-3-phosphate dehydrogenase [Herbaspi...   151   3e-35
emb|CCA85408.1| glycerol-3-phosphate dehydrogenase [Ralstonia sy...   126   1e-27
ref|NP_521166.1| glycerol-3-phosphate dehydrogenase [Ralstonia s...   126   1e-27
emb|CBJ36559.1| Glycerol-3-phosphate dehydrogenase [Ralstonia so...   125   1e-27
emb|CCA81261.1| glycerol-3-phosphate dehydrogenase [blood diseas...   125   2e-27

>ref|YP_003774391.1| glycerol-3-phosphate dehydrogenase [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ62483.1| glycerol-3-phosphate dehydrogenase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 510

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 91/120 (75%), Gaps = 3/120 (2%)

Query: 4   TSGAPRWRIXPGDLEQPGKLVRRYDFARFLAGFSERHSWLPPALAKRYARSYGSRAERLL 63
           T+GAP   +  GDLEQPGK+V RYDF  +L  F  RH WLP  LA RYARSYGSR E+++
Sbjct: 385 TAGAP---LPGGDLEQPGKMVARYDFDAYLRKFQARHPWLPAELAHRYARSYGSRVEQII 441

Query: 64  KGAAALADLGEELAPGLYESEARYLRDVEWACSAEDILWRRSKLGLYCRPQHVERLQQWL 123
             A +LA LGEEL+PGLYE+EARYL   EWA SA+DILWRRSKLGL+C PQH  RL+ WL
Sbjct: 442 GQADSLAALGEELSPGLYEAEARYLVQHEWARSADDILWRRSKLGLHCGPQHRGRLEAWL 501


>emb|CCA85408.1| glycerol-3-phosphate dehydrogenase [Ralstonia syzygii R24]
          Length = 525

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 81/127 (63%), Gaps = 4/127 (3%)

Query: 5   SGAPRWR----IXPGDLEQPGKLVRRYDFARFLAGFSERHSWLPPALAKRYARSYGSRAE 60
           +G P W     +  GDLE PG+LV +Y FA F+    +R  WLPP LA+RYA  YG+R  
Sbjct: 386 AGKPSWTATASLPGGDLETPGQLVAQYTFADFVTRLQKRLPWLPPRLARRYAHQYGTRVT 445

Query: 61  RLLKGAAALADLGEELAPGLYESEARYLRDVEWACSAEDILWRRSKLGLYCRPQHVERLQ 120
            LL GA  L DLG E+ PGLYE+E RYL + EWA +A+DILWRR+KLGLY       RL+
Sbjct: 446 TLLAGAMRLDDLGTEVTPGLYEAEIRYLIEHEWARTAQDILWRRTKLGLYTAEADRNRLE 505

Query: 121 QWLKEQI 127
            WL   +
Sbjct: 506 AWLARHL 512


>ref|NP_521166.1| glycerol-3-phosphate dehydrogenase [Ralstonia solanacearum GMI1000]
 emb|CAD16754.1| probable glycerol-3-phosphate dehydrogenase oxidoreductase protein
           [Ralstonia solanacearum GMI1000]
          Length = 525

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 4/126 (3%)

Query: 5   SGAPRWR----IXPGDLEQPGKLVRRYDFARFLAGFSERHSWLPPALAKRYARSYGSRAE 60
           +GAP W     +  GDLE PG+LV +Y FA F+    +R  WLP  LAKRYA  YG+R  
Sbjct: 386 AGAPSWTATAALPGGDLEAPGQLVGQYTFADFVTRLQKRLPWLPARLAKRYAHQYGTRVT 445

Query: 61  RLLKGAAALADLGEELAPGLYESEARYLRDVEWACSAEDILWRRSKLGLYCRPQHVERLQ 120
            LL GAA L DLG E+ PGLYE+E RYL + EWA +A+DILWRR+KLGLY       RL+
Sbjct: 446 TLLAGAARLDDLGAEVTPGLYEAEIRYLIEYEWARTAQDILWRRTKLGLYAAEADRGRLE 505

Query: 121 QWLKEQ 126
            WL   
Sbjct: 506 AWLTRH 511


>emb|CBJ36559.1| Glycerol-3-phosphate dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 525

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 4/126 (3%)

Query: 5   SGAPRWR----IXPGDLEQPGKLVRRYDFARFLAGFSERHSWLPPALAKRYARSYGSRAE 60
           +GAP W     +  GDLE PG+LV +Y FA F+    +R  WLP  LAKRYA  YG+R  
Sbjct: 386 AGAPSWTATAALPGGDLEAPGQLVGQYTFADFVTRLQKRLPWLPSRLAKRYAHQYGTRVT 445

Query: 61  RLLKGAAALADLGEELAPGLYESEARYLRDVEWACSAEDILWRRSKLGLYCRPQHVERLQ 120
            LL GAA L DLG E+ PGLYE+E RYL + EWA +A+DILWRR+KLGLY       RL+
Sbjct: 446 TLLAGAARLDDLGAEVTPGLYEAEIRYLIEYEWARTAQDILWRRTKLGLYAAEADRGRLE 505

Query: 121 QWLKEQ 126
            WL   
Sbjct: 506 AWLTRH 511


>emb|CCA81261.1| glycerol-3-phosphate dehydrogenase [blood disease bacterium R229]
          Length = 525

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 81/127 (63%), Gaps = 4/127 (3%)

Query: 5   SGAPRWR----IXPGDLEQPGKLVRRYDFARFLAGFSERHSWLPPALAKRYARSYGSRAE 60
           +G P W     +  GDLE PG+LV +Y FA F+    +R  WLPP LA+RYA  YG+R  
Sbjct: 386 AGKPSWTATASLPGGDLETPGQLVAQYTFADFVTRLQKRLPWLPPRLARRYAHQYGTRVT 445

Query: 61  RLLKGAAALADLGEELAPGLYESEARYLRDVEWACSAEDILWRRSKLGLYCRPQHVERLQ 120
            LL GA  L DLG E+ PGLYE+E RYL + EWA +A+DILWRR+KLGLY       RL+
Sbjct: 446 TLLAGAMRLDDLGTEVTPGLYEAEIRYLIEHEWARTAQDILWRRTKLGLYAAEADRSRLE 505

Query: 121 QWLKEQI 127
            WL   +
Sbjct: 506 GWLARHL 512