BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0174.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774392.1| sugar ABC transporter ATPase [Herbaspirillum...   253   5e-66
ref|YP_001900882.1| ABC transporter-like protein [Ralstonia pick...   217   6e-55
ref|YP_002982923.1| ABC transporter-like protein [Ralstonia pick...   217   6e-55
ref|YP_002260980.1| sugar-phosphate atp-binding protein [Ralston...   214   5e-54
gb|AEG67753.1| sn-glycerol-3-phosphate transport ATP-binding pro...   213   8e-54

>ref|YP_003774392.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62484.1| ABC-type sugar transport system, ATPase component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 366

 Score =  253 bits (647), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 123/143 (86%), Positives = 134/143 (93%)

Query: 1   VTLELKQVTKSVGAETHLYPLDLKLAAGGINVLLGPTQAGKTSLMRIIAGLDKPGSGSVL 60
           +TLELKQV K+VGAETHLYPLDL LA GGINVLLGPTQAGKTSLMRIIAGLDKP +G VL
Sbjct: 1   MTLELKQVAKTVGAETHLYPLDLNLAKGGINVLLGPTQAGKTSLMRIIAGLDKPTAGRVL 60

Query: 61  VDGKDVTGVGVRERNLAMVYQQFINYPGLSVYENIASPLRLKKLPQQEIHQRVTEIAEKL 120
           VDG+DVTGVGVRERNLAMVYQQFINYPGL+V+ENIA+PLRL+K P+QEI +RV EIA+KL
Sbjct: 61  VDGQDVTGVGVRERNLAMVYQQFINYPGLTVFENIAAPLRLQKQPEQEISKRVKEIADKL 120

Query: 121 HIAHLLQRLPGELSGGQQQRTAL 143
           HIAHLLQRLPGELSGGQQQR AL
Sbjct: 121 HIAHLLQRLPGELSGGQQQRCAL 143


>ref|YP_001900882.1| ABC transporter-like protein [Ralstonia pickettii 12J]
 gb|ACD28450.1| ABC transporter related [Ralstonia pickettii 12J]
          Length = 372

 Score =  217 bits (552), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 106/141 (75%), Positives = 119/141 (84%)

Query: 3   LELKQVTKSVGAETHLYPLDLKLAAGGINVLLGPTQAGKTSLMRIIAGLDKPGSGSVLVD 62
           LEL QVT  VGA+THLYP  L+LA G INVLLGPTQAGKT+LMRI+AGLD+P +G VLVD
Sbjct: 3   LELDQVTAMVGAQTHLYPTSLRLAPGAINVLLGPTQAGKTTLMRIMAGLDRPTTGRVLVD 62

Query: 63  GKDVTGVGVRERNLAMVYQQFINYPGLSVYENIASPLRLKKLPQQEIHQRVTEIAEKLHI 122
           GKDVTGVGVR+RNLAMVYQQFINYP ++VY+NIASPLRL+   + EI  RV  +A KLHI
Sbjct: 63  GKDVTGVGVRDRNLAMVYQQFINYPAMTVYDNIASPLRLQGTNKGEIDSRVRAVAAKLHI 122

Query: 123 AHLLQRLPGELSGGQQQRTAL 143
            HLLQRLP ELSGGQQQR AL
Sbjct: 123 EHLLQRLPAELSGGQQQRCAL 143


>ref|YP_002982923.1| ABC transporter-like protein [Ralstonia pickettii 12D]
 gb|ACS64251.1| ABC transporter related [Ralstonia pickettii 12D]
          Length = 372

 Score =  217 bits (552), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 106/141 (75%), Positives = 119/141 (84%)

Query: 3   LELKQVTKSVGAETHLYPLDLKLAAGGINVLLGPTQAGKTSLMRIIAGLDKPGSGSVLVD 62
           LEL QVT  VGA+THLYP  L+LA G INVLLGPTQAGKT+LMRI+AGLD+P +G VLVD
Sbjct: 3   LELDQVTAMVGAQTHLYPTSLRLAPGAINVLLGPTQAGKTTLMRIMAGLDRPTTGRVLVD 62

Query: 63  GKDVTGVGVRERNLAMVYQQFINYPGLSVYENIASPLRLKKLPQQEIHQRVTEIAEKLHI 122
           GKDVTGVGVR+RNLAMVYQQFINYP ++VY+NIASPLRL+   + EI  RV  +A KLHI
Sbjct: 63  GKDVTGVGVRDRNLAMVYQQFINYPAMTVYDNIASPLRLQGTNKGEIDTRVRAVASKLHI 122

Query: 123 AHLLQRLPGELSGGQQQRTAL 143
            HLLQRLP ELSGGQQQR AL
Sbjct: 123 DHLLQRLPAELSGGQQQRCAL 143


>ref|YP_002260980.1| sugar-phosphate atp-binding protein [Ralstonia solanacearum
           IPO1609]
 emb|CAQ62921.1| sugar-phosphate atp-binding protein [Ralstonia solanacearum
           IPO1609]
          Length = 371

 Score =  214 bits (544), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 104/141 (73%), Positives = 118/141 (83%)

Query: 3   LELKQVTKSVGAETHLYPLDLKLAAGGINVLLGPTQAGKTSLMRIIAGLDKPGSGSVLVD 62
           LEL QVT  VGA+THLYP  ++LA G INVLLGPTQAGKT+LMRI+AGLD+P +G VLVD
Sbjct: 2   LELDQVTAVVGAQTHLYPTSVRLAPGAINVLLGPTQAGKTTLMRIMAGLDRPTTGRVLVD 61

Query: 63  GKDVTGVGVRERNLAMVYQQFINYPGLSVYENIASPLRLKKLPQQEIHQRVTEIAEKLHI 122
           GKDVTGVGVR+RNLAMVYQQFINYP ++VY+NIASPLRL+   + EI  RV  +A KLHI
Sbjct: 62  GKDVTGVGVRDRNLAMVYQQFINYPAMTVYDNIASPLRLQGTARDEIDARVRTVAAKLHI 121

Query: 123 AHLLQRLPGELSGGQQQRTAL 143
            HLLQRLP  LSGGQQQR AL
Sbjct: 122 DHLLQRLPAALSGGQQQRCAL 142


>gb|AEG67753.1| sn-glycerol-3-phosphate transport ATP-binding protein [Ralstonia
           solanacearum Po82]
          Length = 376

 Score =  213 bits (542), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 104/141 (73%), Positives = 117/141 (82%)

Query: 3   LELKQVTKSVGAETHLYPLDLKLAAGGINVLLGPTQAGKTSLMRIIAGLDKPGSGSVLVD 62
           LEL QVT  VGA+THLYP  ++LA G INVLLGPTQAGKT+LMRI+AGLD+P +G VLVD
Sbjct: 3   LELDQVTAVVGAQTHLYPTSVRLAPGAINVLLGPTQAGKTTLMRIMAGLDRPTTGRVLVD 62

Query: 63  GKDVTGVGVRERNLAMVYQQFINYPGLSVYENIASPLRLKKLPQQEIHQRVTEIAEKLHI 122
           GKDVTGVGVR RNLAMVYQQFINYP ++VY+NIASPLRL+   + EI  RV  +A KLHI
Sbjct: 63  GKDVTGVGVRNRNLAMVYQQFINYPAMTVYDNIASPLRLQGTARDEIDARVRTVAAKLHI 122

Query: 123 AHLLQRLPGELSGGQQQRTAL 143
            HLLQRLP  LSGGQQQR AL
Sbjct: 123 DHLLQRLPAALSGGQQQRCAL 143