BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0148.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774623.1| periplasmic or secreted lipoprotein [Herbasp...   182   2e-44
ref|YP_004681482.1| transporter [Cupriavidus necator N-1] >gi|33...   144   4e-33
ref|YP_746733.1| transport-associated [Nitrosomonas eutropha C91...   140   5e-32
ref|ZP_08272712.1| transport-associated protein [Oxalobacteracea...   140   6e-32
ref|YP_285262.1| transport-associated protein [Dechloromonas aro...   139   1e-31

>ref|YP_003774623.1| periplasmic or secreted lipoprotein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ62715.1| periplasmic or secreted lipoprotein [Herbaspirillum seropedicae
           SmR1]
          Length = 109

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/103 (86%), Positives = 94/103 (91%)

Query: 3   LSLTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEIN 62
           +SLTKR  GFFLAL MVSLVGCASGPNKEGTGEYVDDAVITTKVK AI  E +LKS EIN
Sbjct: 6   MSLTKRFIGFFLALFMVSLVGCASGPNKEGTGEYVDDAVITTKVKAAIFNEKDLKSTEIN 65

Query: 63  VETYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           VETYKGVVQLSGFVSS+TAA+RATELARGVKGV SV+NDLRLK
Sbjct: 66  VETYKGVVQLSGFVSSSTAAARATELARGVKGVVSVRNDLRLK 108


>ref|YP_004681482.1| transporter [Cupriavidus necator N-1]
 gb|AEI80250.1| transporter [Cupriavidus necator N-1]
          Length = 103

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 83/103 (80%)

Query: 3   LSLTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEIN 62
           ++   R++ FFL ++M   +GCAS P +EGTGEYVDD V+TTKVK A+L EP LKSAEIN
Sbjct: 1   MTYLNRLSAFFLTVLMAFSLGCASTPKQEGTGEYVDDTVLTTKVKAAVLNEPTLKSAEIN 60

Query: 63  VETYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           VET+KGVVQLSGFV S   AS+A E+ARGVKGV SVKND+R+K
Sbjct: 61  VETFKGVVQLSGFVRSQADASKAVEVARGVKGVKSVKNDMRIK 103


>ref|YP_746733.1| transport-associated [Nitrosomonas eutropha C91]
 gb|ABI58768.1| transport-associated protein [Nitrosomonas eutropha C91]
          Length = 104

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 78/101 (77%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
           L      FFL L+MVSL+GCAS   + GTGEY+DD VITTKVK AI  EP LKSAEINVE
Sbjct: 4   LNNHFFTFFLTLLMVSLLGCASTAKQSGTGEYLDDTVITTKVKAAIFNEPILKSAEINVE 63

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           T+KGVVQLSGFVSS   A+RA E+AR V GV SVKND+R+K
Sbjct: 64  TFKGVVQLSGFVSSQVHANRAVEIARSVGGVKSVKNDMRIK 104


>ref|ZP_08272712.1| transport-associated protein [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33816.1| transport-associated protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 103

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 81/101 (80%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
            +KRI+ FFLA  ++++ GCAS   KEGTGEYVDD VITTKVK A+L EP LKS EINVE
Sbjct: 3   FSKRISTFFLAAALIAVAGCASTSTKEGTGEYVDDTVITTKVKAALLNEPALKSREINVE 62

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           T+KGVVQLSGFV++   A+ A  LARGVKGV SVKND+R+K
Sbjct: 63  TFKGVVQLSGFVANQADATMAATLARGVKGVMSVKNDIRMK 103


>ref|YP_285262.1| transport-associated protein [Dechloromonas aromatica RCB]
 gb|AAZ46792.1| Transport-associated protein [Dechloromonas aromatica RCB]
          Length = 104

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 82/101 (81%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
            +K ++  FL+L +++ VGCAS    E TGEYVDDA+IT+KVK AIL E  LKSAEINVE
Sbjct: 4   FSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEINVE 63

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           TYKGVVQLSGFVSS  AAS+A E+AR VKGV+SVKND+R+K
Sbjct: 64  TYKGVVQLSGFVSSQAAASKAVEVARTVKGVSSVKNDMRIK 104