BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0146.p (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774625.1| CheY-like response regulator receiver domain... 183 6e-45 ref|YP_004754071.1| putative response regulator receiver domain-... 150 4e-35 ref|YP_001354300.1| CheY-like domain-containing protein [Janthin... 135 1e-30 ref|YP_001100768.1| response regulator [Herminiimonas arsenicoxy... 135 2e-30 ref|ZP_08272829.1| Putative response regulator receiver domain p... 135 2e-30 >ref|YP_003774625.1| CheY-like response regulator receiver domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ62717.1| CheY-like response regulator receiver domain protein [Herbaspirillum seropedicae SmR1] Length = 169 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 96/146 (65%), Positives = 111/146 (76%), Gaps = 6/146 (4%) Query: 18 APLKIFLVEDSEDVRDLIIESLTEIPGVVLAGYSETEQDAMARLENESYDVLILDIQLKQ 77 PL+IFLVEDSEDVRDLI+ESL EI GV L GY+ETE DA+ L+ SYDVLILDIQLKQ Sbjct: 21 TPLRIFLVEDSEDVRDLIVESLAEIGGVRLVGYAETEMDALRHLQQHSYDVLILDIQLKQ 80 Query: 78 GNGMHLLQSLALAGKRRHDELKIVFSNHVSSTYRRVGVQYGVQFFFDKSSEFTKLRSLIE 137 GNGM LLQ+LA + RR E+K+VFSNHVS TYRRVGVQ GVQ FFDKSSE L L+E Sbjct: 81 GNGMSLLQALARSNTRRQSEIKVVFSNHVSPTYRRVGVQCGVQHFFDKSSELPLLCDLLE 140 Query: 138 RISGR--GAAGK----NNSPRGFAPA 157 ++ + G AG+ NNSP+G A A Sbjct: 141 ELAQQRAGKAGRTSSSNNSPQGPAQA 166 >ref|YP_004754071.1| putative response regulator receiver domain-containing protein [Collimonas fungivorans Ter331] gb|AEK63248.1| Putative response regulator receiver domain protein [Collimonas fungivorans Ter331] Length = 142 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 72/118 (61%), Positives = 98/118 (83%), Gaps = 1/118 (0%) Query: 19 PLKIFLVEDSEDVRDLIIESLTEIPGVVLAGYSETEQDAMARLENESYDVLILDIQLKQG 78 PL+IFLVEDS VR+L+I++L+EIPGVV AG++E E DA+ +++ E +DVLILDI+LK+G Sbjct: 16 PLRIFLVEDSAAVRNLMIDTLSEIPGVVFAGFAEGEGDALKKIDAEPFDVLILDIELKEG 75 Query: 79 NGMHLLQSLALAGKRRHDELKIVFSNHVSSTYRRVGVQYGVQFFFDKSSEFTKLRSLI 136 NGM LL++LA A K + LKI+FSN+VS+ +R G +YGV+FFFDKSSEFT+LR L+ Sbjct: 76 NGMSLLRTLAEAHKPL-NSLKIIFSNNVSNAFRNAGAKYGVRFFFDKSSEFTQLRDLL 132 >ref|YP_001354300.1| CheY-like domain-containing protein [Janthinobacterium sp. Marseille] gb|ABR91314.1| CheY-like response regulator receiver domain protein [Janthinobacterium sp. Marseille] Length = 144 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/141 (51%), Positives = 100/141 (70%), Gaps = 8/141 (5%) Query: 10 TTKGHSVDAPLKIFLVEDSEDVRDLIIESLTEIPGVVLAGYSETEQDAMARLENESYDVL 69 TT +SV PL+IFLVEDS DVR+L+IE+L IPGVV+AG SE+E DA+ +L DVL Sbjct: 5 TTFENSVSHPLRIFLVEDSLDVRELMIENLAMIPGVVVAGVSESEGDALNQLNALPCDVL 64 Query: 70 ILDIQLKQGNGMHLLQSLALAGKRRHDELKIVFSNHVSSTYRRVGVQYGVQFFFDKSSEF 129 I+DIQLK+GNG++LL+ ++ + + LKI+ SN+ + +RRVG QYGV FFDK+SEF Sbjct: 65 IVDIQLKKGNGINLLRQIS-EKTKISNTLKIICSNNATEVFRRVGRQYGVNHFFDKTSEF 123 Query: 130 TKLRSLIERIS-------GRG 143 +L L++ +S GRG Sbjct: 124 PQLFELVKNLSCARLEYNGRG 144 >ref|YP_001100768.1| response regulator [Herminiimonas arsenicoxydans] emb|CAL62647.1| Putative two-component response regulator CheY-like [Herminiimonas arsenicoxydans] Length = 141 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/129 (55%), Positives = 99/129 (76%), Gaps = 5/129 (3%) Query: 15 SVDA---PLKIFLVEDSEDVRDLIIESLTEIPGVVLAGYSETEQDAMARLENESYDVLIL 71 SVDA PL IFLVEDS DVR+L+IE+L IPGVV++G SE+E DA+A+L+ + D+LI+ Sbjct: 5 SVDAGCNPLHIFLVEDSLDVRELMIENLAMIPGVVVSGVSESESDALAQLDMQPCDILIV 64 Query: 72 DIQLKQGNGMHLLQSLALAGKRRHDELKIVFSNHVSSTYRRVGVQYGVQFFFDKSSEFTK 131 DIQLK+GNG++LL+ L+ +R D +KI+ SN+ + +RRVG QYGV FFDK+SEF + Sbjct: 65 DIQLKKGNGINLLRQ--LSERRTSDLVKIICSNNSTEIFRRVGRQYGVDHFFDKTSEFPQ 122 Query: 132 LRSLIERIS 140 L +L+ +S Sbjct: 123 LFNLVRDLS 131 >ref|ZP_08272829.1| Putative response regulator receiver domain protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33699.1| Putative response regulator receiver domain protein [Oxalobacteraceae bacterium IMCC9480] Length = 140 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 103/140 (73%), Gaps = 3/140 (2%) Query: 14 HSVDAPLKIFLVEDSEDVRDLIIESLTEIPGVVLAGYSETEQDAMARLENESYDVLILDI 73 H + PL++FL+EDS VR+L+IES +IPG+ L G++++E +A +LE + D+LILDI Sbjct: 3 HPLSPPLQVFLIEDSSLVRELVIESFADIPGITLIGHADSEDEAFDQLERQRCDILILDI 62 Query: 74 QLKQGNGMHLLQSLALAGKRRHDELKIVFSNHVSSTYRRVGVQYGVQFFFDKSSEFTKLR 133 QL+QGNG++LL+ L + +++ +++I+FSN+VS Y R+ Q GVQ+FFDK+SEFT +R Sbjct: 63 QLRQGNGINLLRRLG-SQPQQNKQIRIIFSNNVSKGYHRLAGQLGVQYFFDKTSEFTDMR 121 Query: 134 SLIERISGRGAAGKNNSPRG 153 L+E++ G G + SP+ Sbjct: 122 ELLEQL-GNGTV-PSRSPKA 139