BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0125.p (145 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774386.1| membrane protein [Herbaspirillum seropedicae... 197 3e-49 ref|YP_001355027.1| hypothetical protein mma_3337 [Janthinobacte... 182 1e-44 ref|YP_001584946.1| AbgT putative transporter [Burkholderia mult... 181 3e-44 ref|YP_623579.1| hypothetical protein Bcen_3714 [Burkholderia ce... 181 3e-44 ref|YP_001947939.1| hypothetical protein BMULJ_03531 [Burkholder... 181 4e-44 >ref|YP_003774386.1| membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62478.1| membrane protein [Herbaspirillum seropedicae SmR1] Length = 444 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 94/145 (64%), Positives = 120/145 (82%) Query: 1 VADLNLAGRIGAWVFAGVLTIIANWIAYKVAPLESVGCIVIMIGAVLVGDLLCNLTGRKI 60 V +LN + GAW A VLT++++WI Y P+E++ +++++ AV VGD+LC LTGR++ Sbjct: 300 VPELNPLQKWGAWGVAAVLTLVSDWILYGSKPIETLPGMLVILAAVAVGDVLCRLTGRRV 359 Query: 61 PAVCWVTLVAMFLTSPACPWADAIVAITGKINFLAVITPMLTFAGLSIAKDIPAFRKLGW 120 PAVCWV+++AM LTSP CPWA +VA+TGKINFL+V MLTFAGLS+AKDIPAFR+LGW Sbjct: 360 PAVCWVSIMAMALTSPLCPWAPQLVALTGKINFLSVTPVMLTFAGLSLAKDIPAFRRLGW 419 Query: 121 RIVLVSFAANAGTFIGATLIAEFFH 145 RIVLVSFAANAGTFIGATL+AE FH Sbjct: 420 RIVLVSFAANAGTFIGATLVAEIFH 444 >ref|YP_001355027.1| hypothetical protein mma_3337 [Janthinobacterium sp. Marseille] gb|ABR90797.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 444 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/134 (66%), Positives = 110/134 (82%) Query: 12 AWVFAGVLTIIANWIAYKVAPLESVGCIVIMIGAVLVGDLLCNLTGRKIPAVCWVTLVAM 71 AWV +G LT+I +WIA+ PL ++ ++I++ AV VG L G+KIPAVCWV+L+AM Sbjct: 310 AWVLSGGLTLIGDWIAHGSNPLAALPGMLIVLSAVTVGVLANKFLGKKIPAVCWVSLIAM 369 Query: 72 FLTSPACPWADAIVAITGKINFLAVITPMLTFAGLSIAKDIPAFRKLGWRIVLVSFAANA 131 LT+P CPWA I +TGKI+FLA ITPMLTFAGLSIAKDIPAFR+LGWRIV+VSFAANA Sbjct: 370 LLTAPICPWATQIAELTGKISFLAFITPMLTFAGLSIAKDIPAFRRLGWRIVVVSFAANA 429 Query: 132 GTFIGATLIAEFFH 145 GTF+GAT+IA+FFH Sbjct: 430 GTFLGATVIAQFFH 443 >ref|YP_001584946.1| AbgT putative transporter [Burkholderia multivorans ATCC 17616] gb|ABX18654.1| AbgT putative transporter [Burkholderia multivorans ATCC 17616] Length = 481 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 83/142 (58%), Positives = 111/142 (78%) Query: 4 LNLAGRIGAWVFAGVLTIIANWIAYKVAPLESVGCIVIMIGAVLVGDLLCNLTGRKIPAV 63 L+ +G++ AW+ V +++ +WI + +PL + + M+ A ++GD L +T RKIPAV Sbjct: 339 LSYSGKVAAWLLTAVFSLVCDWITHGTSPLFGLPGMAFMVLATVIGDALSTVTRRKIPAV 398 Query: 64 CWVTLVAMFLTSPACPWADAIVAITGKINFLAVITPMLTFAGLSIAKDIPAFRKLGWRIV 123 CWV++VAMF+TSP CPWA AI A++ K +FL V+TPMLTFAGLSIAKDIPAFR+LGWRIV Sbjct: 399 CWVSVVAMFMTSPLCPWAPAIAAMSAKNDFLGVVTPMLTFAGLSIAKDIPAFRRLGWRIV 458 Query: 124 LVSFAANAGTFIGATLIAEFFH 145 LVSF ANAGTF+GA L+A+ FH Sbjct: 459 LVSFVANAGTFLGAALVAQIFH 480 >ref|YP_623579.1| hypothetical protein Bcen_3714 [Burkholderia cenocepacia AU 1054] ref|YP_838281.1| hypothetical protein Bcen2424_4654 [Burkholderia cenocepacia HI2424] ref|YP_001779262.1| hypothetical protein Bcenmc03_5650 [Burkholderia cenocepacia MC0-3] gb|ABF78606.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] gb|ABK11388.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] gb|ACA94772.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 444 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 86/142 (60%), Positives = 107/142 (75%) Query: 4 LNLAGRIGAWVFAGVLTIIANWIAYKVAPLESVGCIVIMIGAVLVGDLLCNLTGRKIPAV 63 L G++ AW+ + ++ +WIA+ PL + I IM+GA +VGD L +TGR+IPAV Sbjct: 302 LGYGGKLLAWIVTAAMALVCDWIAHGTTPLAGLPGIAIMVGATIVGDALARVTGRRIPAV 361 Query: 64 CWVTLVAMFLTSPACPWADAIVAITGKINFLAVITPMLTFAGLSIAKDIPAFRKLGWRIV 123 CWV++VAMFLTSP PWA I A++ +FL V TPML FAGLSIAKDIPAFR+LGWRIV Sbjct: 362 CWVSVVAMFLTSPWSPWASQIAALSSHNDFLGVTTPMLVFAGLSIAKDIPAFRRLGWRIV 421 Query: 124 LVSFAANAGTFIGATLIAEFFH 145 LVSF ANAGTFIGATL+A+ FH Sbjct: 422 LVSFVANAGTFIGATLVAQLFH 443 >ref|YP_001947939.1| hypothetical protein BMULJ_03531 [Burkholderia multivorans ATCC 17616] ref|ZP_03583915.1| AbgT putative transporter family [Burkholderia multivorans CGD1] dbj|BAG45403.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] gb|EEE02358.1| AbgT putative transporter family [Burkholderia multivorans CGD1] Length = 448 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 83/142 (58%), Positives = 111/142 (78%) Query: 4 LNLAGRIGAWVFAGVLTIIANWIAYKVAPLESVGCIVIMIGAVLVGDLLCNLTGRKIPAV 63 L+ +G++ AW+ V +++ +WI + +PL + + M+ A ++GD L +T RKIPAV Sbjct: 306 LSYSGKVAAWLLTAVFSLVCDWITHGTSPLFGLPGMAFMVLATVIGDALSTVTRRKIPAV 365 Query: 64 CWVTLVAMFLTSPACPWADAIVAITGKINFLAVITPMLTFAGLSIAKDIPAFRKLGWRIV 123 CWV++VAMF+TSP CPWA AI A++ K +FL V+TPMLTFAGLSIAKDIPAFR+LGWRIV Sbjct: 366 CWVSVVAMFMTSPLCPWAPAIAAMSAKNDFLGVVTPMLTFAGLSIAKDIPAFRRLGWRIV 425 Query: 124 LVSFAANAGTFIGATLIAEFFH 145 LVSF ANAGTF+GA L+A+ FH Sbjct: 426 LVSFVANAGTFLGAALVAQIFH 447